BGIOSGA018629

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018629| Description = BGIOSGA018629| Definition = Oryza sativa Indica Group BGIOSGA018629, complete gene.| tag = | tid = BGIOSGA018629-TA|...")
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Gene Name

BGIOSGA018629

Description

BGIOSGA018629

Definition

Oryza sativa Indica Group BGIOSGA018629, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA018629-TA

Ensembl Protein ID

BGIOSGA018629-PA

Length

1629

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6590918..6592546

Sequence Coding Region

6592288..6592546,6592067..6592215),complement(6591752..6591955,6591360..6591452),complement(6590918..6591277

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6590918..6592546 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6590918..6592546 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAGGAGTAGAAGGCGGTGCATTGTTCAAAGCCATTTGGAATATTTGTCAGAGGAACACATTGCAGAAGAAAATGCCCCTAAACAGCTTGCCACACCATCTGAACAAGAAACAATATGTAGTGATGTTCAAGAGGGTAATGAAGATACTAATGACGATGTTGGAGAAGCCAATGAAGATACTGATGACGATGCTAGTATGAATTCTGGAGAAGGCAATGAAGAATCTGATGATGATGTTGAAATTAATGTTCGAGATGAAAATGGAACAATTGAAACACGTGGGAAGACAAAACTGAAAGATATTTGGAACCTTCCGAAAGGGCTTAGGATTGTGGTTCAGTGCAATGATCTCAACCAGGCAGTAGGAGATGAAGCTGGAATTTTGTCTAAATTTCTTGGAATGATGAGATTCCTTTATGCTCCTCGGATGGAAGAATTCATATTATATACAATTAGAGAGAGATGGAGGGGACATAAAGCAAAACTAAAAGAAAAGTATTTTGATGTGAATAAGAGCAAAGAAGCTAATTGCAACAATGTCCCAGCTGATGTGCTTCCTGACCAGTGGATTGCTCTTATCAATCATTGGATGAGCGAGAAATCGAAGAGACAAAAAGATCCTGCAAAGAATCCTCACAGAGCTATTGTGTACATCCAAACACACAAGCGCAAAACTGGCAAGAATCTAAATGGGCATGTGGATAATTTGAAGAAACTTGTAGTTGAACAACCAGCTTTAGCAGACACTAGTGAAGGAAGGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTTGGAGATGACAAGCCTGGGCATGTGCATGGTCTTGGACTAGTTCCAAAGCCTAAACAAGTTCTCGATGTGTCAAATTCCCGACGCTTAAAGAATATAAATGTTACTAGACTGGATGATAACTGGAGTGAATATGTTGTGGCTGCTAGACTGCAGTTGGAAAAGATCGAAAATCATGTCCAACATCATGATGCGGAGCTTTTGGAATTGAAAGCGAAGACATANCCACGCTTGGAAAAAGAACAAATGAATCAGGTGAGAATTTGA</cdnaseq>

Protein Sequence

<aaseq>MARSRRRCIVQSHLEYLSEEHIAEENAPKQLATPSEQETICSDVQEGNEDTNDDVGEANEDTDDDASMNSGEGNEESDDDVEINVRDENGTIETRGKTKLKDIWNLPKGLRIVVQCNDLNQAVGDEAGILSKFLGMMRFLYAPRMEEFILYTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALINHWMSEKSKRQKDPAKNPHRAIVYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVPKPKQVLDVSNSRRLKNINVTRLDDNWSEYVVAARLQLEKIENHVQHHDAELLELKAKTXPRLEKEQMNQVRI</aaseq>

Gene Sequence

<dnaseqindica>1..259#332..480#592..795#1095..1187#1270..1629#ATGGCAAGGAGTAGAAGGCGGTGCATTGTTCAAAGCCATTTGGAATATTTGTCAGAGGAACACATTGCAGAAGAAAATGCCCCTAAACAGCTTGCCACACCATCTGAACAAGAAACAATATGTAGTGATGTTCAAGAGGGTAATGAAGATACTAATGACGATGTTGGAGAAGCCAATGAAGATACTGATGACGATGCTAGTATGAATTCTGGAGAAGGCAATGAAGAATCTGATGATGATGTTGAAATTAATGTTCGAGGTAAATACTAAATCTTGATGGTAAGAAATAATGAAATTATTCTTCTTATCCTTGCAATTTAACATTGAACAGATGAAAATGGAACAATTGAAACACGTGGGAAGACAAAACTGAAAGATATTTGGAACCTTCCGAAAGGGCTTAGGATTGTGGTTCAGTGCAATGATCTCAACCAGGCAGTAGGAGATGAAGCTGGAATTTTGTCTAAATTTCTTGGAATGGTAGCTAGGAATGGTACTTTGTGTAGCTTAAGCTACACAGACTGGAGATTTCTATAGGAAAGAGAGAGAGAAAAACAAAATCCCTAGATGAGTTTCTTTGTTGGTATCCAGATGAGATTCCTTTATGCTCCTCGGATGGAAGAATTCATATTATATACAATTAGAGAGAGATGGAGGGGACATAAAGCAAAACTAAAAGAAAAGTATTTTGATGTGAATAAGAGCAAAGAAGCTAATTGCAACAATGTCCCAGCTGATGTGCTTCCTGACCAGTGGATTGCTCTTATCAATCATTGGATGAGCGAGAAATCGAAGGTATATAGGCATTGCATATTCACTACTGTGATGTTCTTACAAATGAGACTATCAATTGAACTAAACAATGTTGTGCTCATGTATATTTGCTAACTCTTATGATACGAGAACAGAAAATAAGCAAGCAGAACAAGGAAAATTGTCGAAAGAAGAAGGCATTACACACAGCAGGGACAAATAGTTTTGCTCGTACAAGAGAAGAGATGGTAAAACATGTCCTGGAATAGCATTTGTCCAATTTCCATTCCAATCCTATATAGACTGTGTAGGATTTAATGATTTGTTCACATGTTCCATAGAGACAAAAAGATCCTGCAAAGAATCCTCACAGAGCTATTGTGTACATCCAAACACACAAGCGCAAAACTGGCAAGAATCTAAATGGGCATGTGGTATACTATCAAATCTAAACTATAGATAATTTAAGTTTCAACTTTTTTTCATATGTTCTATTCATATTGTTCCTGTGTTTAGGATAATTTGAAGAAACTTGTAGTTGAACAACCAGCTTTAGCAGACACTAGTGAAGGAAGGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTTGGAGATGACAAGCCTGGGCATGTGCATGGTCTTGGACTAGTTCCAAAGCCTAAACAAGTTCTCGATGTGTCAAATTCCCGACGCTTAAAGAATATAAATGTTACTAGACTGGATGATAACTGGAGTGAATATGTTGTGGCTGCTAGACTGCAGTTGGAAAAGATCGAAAATCATGTCCAACATCATGATGCGGAGCTTTTGGAATTGAAAGCGAAGACATANCCACGCTTGGAAAAAGAACAAATGAATCAGGTGAGAATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018629