BGIOSGA018630

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018630| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018630, complete gene.| tag = P0708D1...")
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Gene Name

BGIOSGA018630

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018630, complete gene.

LocusTag

P0708D12.13

Ensembl Transcript ID

BGIOSGA018630-TA

Ensembl Protein ID

BGIOSGA018630-PA

Length

4037

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6583530..6587566

Sequence Coding Region

6587308..6587566,6587087..6587235),complement(6586771..6586974,6586565..6586657),complement(6586380..6586475
,6585953..6586297),complement(6585683..6585766,6585508..6585597),complement(6585323..6585382
,6584789..6584836),complement(6584475..6584540,6584126..6584191),complement(6583530..6583553

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6583530..6587566 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6583530..6587566 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAAGGAGTAGAAGGCGGTGCATTGTTCAAAGCCATTTGGAATATTTGTCAGAGGAACACATTGCAGAAGAAAATGCCCCTAAACAGCTTGCCACACCATCTGAACAAGAAACAATATGTAGTGATGTTCAAGAGGGTAATGAAGATACTAATGACGATGTTGGCGAAGCCAATGAAGATACTGATGACGATGCTAGTATGAATTCTGGAGAAGGCAATGAAGAATCTGATGATGATGTTGAAATTAATGTTCGAGATGAAAATGGAACAATTGAAACACGTGGGAAGACAAAACTGAAAGATATTTGGAACCTTCCGAAAGGGCTTAGGATTGTGGTTCAGTGCAATGATCTCAACCAGGCAGTAGGAGATGAAGCTGGAATTTTGTCTAAATTTCTTGGAATGATGAGATTCCTTTATGCTCCTCGGATGGAAGAATTCATATTAAAAACGATTAGAGAGAGATGGAGGGGACATAAAGCAAAACTAAAAGAAAAGTATTTTGATGTGAATAAGAGCAAAGAAGCTAATTGCAACAATGTCCCAGCTGATGTGCTTCCTGACCAGTGGATTGCTCTTATCAATCATTGGATGAGCGAGAAATCGAAGAAAATAAGCAAGCAGAACAAGGAAAATTGTCGAAAGAAGAAGGCATTACACACAGCAGGGACAAATAGCTTTGCTCGTACAAGAGAAGAGATGAGACAAAAAGATCCTGCAAAGAAGAATCCTCACAGAGCTATTGTGTACATCCAAACACACAAGCGCAAAACTGGCAAGAATCTAAATGGGCATGTGGATAATTTGAAGAAACTTGTAGTTGAACAACCAGCTTTAGCAGACACTAGTGAAGGAAGGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTTGGAGATGACAAGCCTGGGCATGTGCATGGTCTTGGACTAGTTCCAAAGCCTAAACAAGTTCTCGATGTGTCAAATTCCCGACGCTTAAAGAATATAAATGTTACTAGACTGGATGATAACTGGAGTGAAGATGTTGTGGCTGCTAGACTGCAGTTGGAAAAGATCGAAAATCATGTCCAAAATCATGATGCGGAGCTTTTGGAATTGAAAGCGAAGACAAACAAGTTGGAAAAAGAACAAATGAATCAGAGAGTGTATTCTGACCATCCCTTGCAAGAAATTTGTATTGCTGAGGAGGAAAACGATATGGTTCAGGAGGAAAACAATATGATGAATATATGCTCCCTTTCAAAACAGAATATACAGAGCCATGTTCCAAATGAGGATTTGCAACCAAAAACCAAGCAATGTGTTGAAGACAAGAACAAACAAAATTGGGAACAACATGACTATGGGAAACAAAGGAAGGTTATTTCTGCACGGAAAAGACAGTGCAGCACAACAAACTTTATCGCTGACAATTCAATGGAGGACACAAATATCCATGTTCAGAACAAGGTTTTGCAACTACCAACCAAGCAATCTACTATATATAAGAATAAAGGAAACATGAACCAGAATGATCACATGCAACAAGGGAAGAATAATTCTAATGCTTATAAGGTTGACAAGATAAATGGATCATGA</cdnaseq>

Protein Sequence

<aaseq>MARSRRRCIVQSHLEYLSEEHIAEENAPKQLATPSEQETICSDVQEGNEDTNDDVGEANEDTDDDASMNSGEGNEESDDDVEINVRDENGTIETRGKTKLKDIWNLPKGLRIVVQCNDLNQAVGDEAGILSKFLGMMRFLYAPRMEEFILKTIRERWRGHKAKLKEKYFDVNKSKEANCNNVPADVLPDQWIALINHWMSEKSKKISKQNKENCRKKKALHTAGTNSFARTREEMRQKDPAKKNPHRAIVYIQTHKRKTGKNLNGHVDNLKKLVVEQPALADTSEGRTAWKGDALNQILGDDKPGHVHGLGLVPKPKQVLDVSNSRRLKNINVTRLDDNWSEDVVAARLQLEKIENHVQNHDAELLELKAKTNKLEKEQMNQRVYSDHPLQEICIAEEENDMVQEENNMMNICSLSKQNIQSHVPNEDLQPKTKQCVEDKNKQNWEQHDYGKQRKVISARKRQCSTTNFIADNSMEDTNIHVQNKVLQLPTKQSTIYKNKGNMNQNDHMQQGKNNSNAYKVDKINGS</aaseq>

Gene Sequence

<dnaseqindica>1..259#332..480#593..796#910..1002#1092..1187#1270..1614#1801..1884#1970..2059#2185..2244#2731..2778#3027..3092#3376..3441#4014..4037#ATGGCAAGGAGTAGAAGGCGGTGCATTGTTCAAAGCCATTTGGAATATTTGTCAGAGGAACACATTGCAGAAGAAAATGCCCCTAAACAGCTTGCCACACCATCTGAACAAGAAACAATATGTAGTGATGTTCAAGAGGGTAATGAAGATACTAATGACGATGTTGGCGAAGCCAATGAAGATACTGATGACGATGCTAGTATGAATTCTGGAGAAGGCAATGAAGAATCTGATGATGATGTTGAAATTAATGTTCGAGGTAAATACTAAATCTTGATGGTAAGAAATAATGAAATTATTCTTCTTATCCTTGCAATTTAACATTGAACAGATGAAAATGGAACAATTGAAACACGTGGGAAGACAAAACTGAAAGATATTTGGAACCTTCCGAAAGGGCTTAGGATTGTGGTTCAGTGCAATGATCTCAACCAGGCAGTAGGAGATGAAGCTGGAATTTTGTCTAAATTTCTTGGAATGGTAGCTAGGAATGGTACTTTGTGTAGCTTAAGCTACACAGACTGGAGATTTCTAATAGGAAAGAGAGAGAGAAAAACAAAATCCCTAGATGAGTTTCTTTGTTGGTATCCAGATGAGATTCCTTTATGCTCCTCGGATGGAAGAATTCATATTAAAAACGATTAGAGAGAGATGGAGGGGACATAAAGCAAAACTAAAAGAAAAGTATTTTGATGTGAATAAGAGCAAAGAAGCTAATTGCAACAATGTCCCAGCTGATGTGCTTCCTGACCAGTGGATTGCTCTTATCAATCATTGGATGAGCGAGAAATCGAAGGTATATAGGCATTGCATATTCACTACTGTGATGTTCTTACAAATGAGACTATCAATTGAACTAAACAATGTTGTGCTCATGTATATTTGCTAACTCTTATGATACGAGAACAGAAAATAAGCAAGCAGAACAAGGAAAATTGTCGAAAGAAGAAGGCATTACACACAGCAGGGACAAATAGCTTTGCTCGTACAAGAGAAGAGATGGTAAAACATGTCCTGGAATAGCATTTGTCCAATTTCCATTCCAATCCTATACTGTGTAGGATTTAATGATTTGTTCACATGTTCCATAGAGACAAAAAGATCCTGCAAAGAAGAATCCTCACAGAGCTATTGTGTACATCCAAACACACAAGCGCAAAACTGGCAAGAATCTAAATGGGCATGTGGTATACTATCAAATCTAAACCATAGATAATTTAAGTTTCAACTTTTTTTCATATGTTCTATTCATATTGTTCCTGTGTTTAGGATAATTTGAAGAAACTTGTAGTTGAACAACCAGCTTTAGCAGACACTAGTGAAGGAAGGACTGCTTGGAAAGGAGATGCATTGAACCAAATACTTGGAGATGACAAGCCTGGGCATGTGCATGGTCTTGGACTAGTTCCAAAGCCTAAACAAGTTCTCGATGTGTCAAATTCCCGACGCTTAAAGAATATAAATGTTACTAGACTGGATGATAACTGGAGTGAAGATGTTGTGGCTGCTAGACTGCAGTTGGAAAAGATCGAAAATCATGTCCAAAATCATGATGCGGAGCTTTTGGAATTGAAAGCGAAGACAAACAAGTTGGAAAAAGAACAAATGAATCAGGTGAGAATTTGAAGAAGTTGTATAGTTGGTGTTACAGGGAGGTTTAGATCGAGTATCTACAAACAAAGAAGCTAGTGTTGATGGCCCTATTTCGAAAAGGAGGGTATGTATCTCTATGGAAGATTACCCTATATAGTTTGGAAAAAAATATGGTCTAAATCTCCTTTTCTTTTCTACTGTTGACAGAGAGTGTATTCTGACCATCCCTTGCAAGAAATTTGTATTGCTGAGGAGGAAAACGATATGGTTCAGGAGGAAAACAATATGATGGTAATATACTGGAATTGCACTATTGTAAAGCTAGGAATAGTTGCACTATTTTGTAATTGAGAATATATGGTCCCTTTCAAAACAGAATATATGCTCCCTTTCAAAACAGAATATACAGAGCCATGTTCCAAATGAGGATTTGCAACCAAAAACCAAGCAATGTGTTGAAGACAAGGTACTTGTCTTACCAACTATATTATTATTCTGAACCCACCATGATTACTTAACATTATTTGATTTTGTACTGTTTGTAGCTATGGTTGTTTACTATAGTTCATAATCTTATGCATTTTATTTTAGAACAAACAAAATTGGGAACAACATGACTATGGGAAACAAAGGAAGGTTATTTCTGCACGGGTTAGTTTTCATTTTTTTTATTGATTGCAACTCACCATGTTTGTGCTATTCTAATGCAACAATTGATGAAACAATCCATGTCTTAGAGTTTTCGTAATGTTTTTTTACCTTCTTCTATAGAAAAAAAAACTAACAAGGAAAACCATGTGATGAATGCATGAAAAGTTGTTGAAGCATCCAAGGTTATTTTTTATTCATCATGTCTATAAATTTCTGTTTTTTACAAAATATAGCATGTATGATTGACTAGTAGTTTTGATTACATTGCAGAATAAAGAAAGAGAAAAAAAATGCTCAGAGCCATGTTAGACTAGGCCAAAACCAACCAACTGCTGCTCCTAAGGTTAGTACTGTTTATTCTATTATATTTTGCAAGGGATTGACTTTGTGCACAGATTTATGTTTTGATTTATCACTTCAACATTTATTTTGACTGTATGCAGTTAAGTTGCAGACTCATGATCGAAACAATTCTTATTTTTACAGAAAAGACAGTGCAGCACAACAAACTTTATCGCTGACAATTCAATGGAGGTAAACCATATTAAAGTTTTACTGTACAGTGCTTCATAAATATATGGTATGAATCTCCATTTGGTTTCTACTATTGTTAGAGAGTGTGTGTTAACGGTCCCTTGCAAGAAAATTCTATGGTTGAGCATCAAAACAATATGATTGAGCATGAAAACAATGCTATAGTAAAGTATAAAAATTACACTGTTTTTAGCTGGGAATAGTTGCACTATTTTCTAACTAGTAATATTGTCTCTCTTTCACATCAGGACACAAATATCCATGTTCAGAACAAGGTTTTGCAACTACCAACCAAGCAATCTACTATATATAAGGTCATTCTCTTCTTATTTGTTATGTCGAACTCACTACATAGCATTATATGATCTCGATATTGTTTGCAACTGTCAACGTTTATTGTAGCTGTTCATTACAATCTTATGTCTTATTTTATTACAGAGCAATCAAACTTATGGCCAAAATCACCTTGAGAAACAGAGGAAGATTATTTGTGTGAAGGCTAGTCTTCACTTTTTTATTGATTGGAACTCACAGTGTTTAATTATAAAAATAACTAGATTATTGTAGTTTGTGCCAATATTTTGATATTCCATGCAGAATAAAGGAAACATGAACCAGAATGATCACATGCAACAAGGGAAGAATAATTCTAATGCTTATAAGGTAAATTTTCACTTCTGGAGCCACCTAATATAAAGATAAGCTATAGAATTCTATTTGGTATAATATGTTTGTACTTTATAGTTAAATTATTGAATCTTGATCCAAATAACTTTGTACATAAACAACAGTGCAACATAGTGAACATTATGGATGCCAATTCATTGGAGATAAAACTTTTAATATGATGTTCTTTTCCATACTTAATTGCTCTTTATGTAGAGATAATGCTCATGGACATATATTTATGCACCAGATTGGAACTATTGTATTCTTGAAAAGCTAGAAAAATCGAAATAAGAATGTGGCTGTTGCTTCAATTGTAAGCTATGATCCAACACGCAAAGTTGCATGTGTTGAGCTAGGAACTGAATACTTGATGGTGCATGTTCATTTTCCATTGGCAAAATATGAAGAATTGATCAGGCCATACAAAGGCTACAAAATTATTAGCAATGTCGTAGGACTTGATATTGCGTGGCCAGCAATTTTTGTACGGTGCTATTTCTCAATTTCTTTAGATGTGGTCTTCTTTCTTCCAATGTTGTATCAATGGTTGTTTTTTTCTGTTACAGGTTGACAAGATAAATGGATCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018630

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