BGIOSGA018646

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018646| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018646, complete gene.| tag = P0636E0...")
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Gene Name

BGIOSGA018646

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018646, complete gene.

LocusTag

P0636E04.6

Ensembl Transcript ID

BGIOSGA018646-TA

Ensembl Protein ID

BGIOSGA018646-PA

Length

5255

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:6235507..6240761

Sequence Coding Region

6240707..6240761,6239938..6240011),complement(6239388..6239459,6238665..6238774),complement(6237787..6238209
,6237567..6237681),complement(6237380..6237445,6237191..6237279),complement(6236993..6237080
,6236757..6236894),complement(6236524..6236616,6236328..6236429),complement(6235507..6236082

Genome Context

<gbrowseImage1> name=IndicaChromosome05:6235507..6240761 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:6235507..6240761 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCATAATTTAGAGCTAGTTGGTTACACTGTTAAACTTGCTCTCAGCGCTGCAGATGAGGTCAACTTTGTTCGGTATGAAATCCTTATAGGTTTAGTAATGCGGCGAAGCGATCGACTCAAGTTTGCGGATAGTTGGAGTGCTAATTCTCAAGCACTCCCTGAAAATGAGGGTCACGGTGCAAAAGAGACGCTTGACAAGCAAAAGTCTATACGTTTATGGGAAGTTTGGAAACTTTCTTCTGATGCCTTCCTGCTGTTCGAGCTCTTCTTAGTTTGCACCTTCTTGAGTTTCCCCTGTTTTTCCTCAAGAGCAGAAGATTTCAGTTTTATGGGAGTGCATCAGCATGCATGGGGTGAAGTTGGCATCGAGATCTTCAGCCCAAGGTCCAAGCATATAGCCATGGTGAACAAAATCTCACCCTGGGATGAACAAGAGAAGATGGCCTTGAGAAGTAATGGAGCATTGGTGAAGTCACTGAGCTTCAAAGAATGGGAAGGAGGTGAACAAACCAAAAAAAGTTCAGTCAACCACAAGAACAGGCCGAGCCGGATCAACGTCGTCGTCGACAACCGGAGAAATTCAGACATTTTCATGGCAGAATCAAGCCCGATTGTGTCTTCCAGCCCCAAATGTGAGCTTGATGCTGCAGCAGTGAAGGTTCAGAAGGTGTACAAGAGCTACCGGACGCGGCGAAACCTCGCCGATTGCGCAGTCGTCGTCGAGGAGCTATGGTGGAAGGCATTGGACTTTGCATCGCTGAAGCACAGCTCGATATCATTCTTCAATGGCGAAAAGCCCGAAACCGCGGCGTCGCGGTGGGCAAGAGCAAGAACAAGAGCAGCCAAGGTTGGAAAGGGGTTATCGAAGAACGGGAAGGCTCAGAAGCTGGCATTGCAGCACTGGCTCGAAGCTATTGATCCGAGGCATCGATATGGCCACAATTTGCATATTTATTATGGTGTCTGGTCCAGGAGTGAGAGTACAGAGCCATTCTTTTATTGGTTGGACATTGGGGAGGGCAAAGAAGTAAATCTTGACAGGTGTCCTAGGAACAAGCTTCAGAGCCAGTGCGTCAAGTACCTTGGACCAAAAGAGAGGCAGGAGTATGAGGTTGTTGTGGAGAGTGGCAGGCTTGTTTACAAACAGTCTGGAGTTTTTGTCCACACTTCAGATGATTCCAAGTGGATCTTTGTCCTCAGCACAACCAAGGCATTGTATGTTGGCCAGAAGAAGAAAGGGTCATTTCAGCACTCCAGCTTTCTGGCTGGTGGAGCAATCACATCTGCTGGGAGATTAGTGGTCAAAGACGGAATCCTCAAGGCAATCTGGCCTTACAGTGGTCACTACCTCCCAACCGAGGAGAATTTCAGAGAGTTCATCAGCTACCTTCAGGAGAACGGCGTCGACCTTGCCGATGTCAAGAGATGTCCCATGGACAAAGACGACGAGTACCCATTGCTGACAAAGCCTGACGTCACCGCCGCCTCCATTGCCGCCACCAAGAACGTCGAGAAGGTCGCCGCCGCCACCGCAGCCGCAGCCGAGCGGCTGACCGAGACCGTCTCCGACGACACGGACCACGCCGCCGTCGACGAAGAGGGCAGCATGAGCGAAGGCGAGGACGAAGACGCCGACGTCCCAACGGCAACCAAAGAAGACGAGCACAAGGCGACCTCCTCGTCGGCGGCGAACACCGCCGCCGCCGCCGCTGCCGCAGAGAACCACCTGCCGTGCAGGTGGTCGACGGGGACGGGGCCGAGGATCCGGTGCGTGCGCGACTACCCGCAGGACCTGCAGTCGAGGGCGCTGGAGCACGTCAACCTGTCGCCGCGCCTCGCCGCCGCCGGGGTGGCGCCGGCGACGAGGAAGAGGGACCCGGTGCCGTCGCCGCGGCCGAGCCCCGGGATGATACTGTCGCCGCAGCTGGCCTCCGTGGGCTTCCGGCCGCCGGTGGTGGCGCTCACGCTGCCGGACTTCAAGAGGAGCAGATTGCAGTGA</cdnaseq>

Protein Sequence

<aaseq>MHNLELVGYTVKLALSAADEVNFVRYEILIGLVMRRSDRLKFADSWSANSQALPENEGHGAKETLDKQKSIRLWEVWKLSSDAFLLFELFLVCTFLSFPCFSSRAEDFSFMGVHQHAWGEVGIEIFSPRSKHIAMVNKISPWDEQEKMALRSNGALVKSLSFKEWEGGEQTKKSSVNHKNRPSRINVVVDNRRNSDIFMAESSPIVSSSPKCELDAAAVKVQKVYKSYRTRRNLADCAVVVEELWWKALDFASLKHSSISFFNGEKPETAASRWARARTRAAKVGKGLSKNGKAQKLALQHWLEAIDPRHRYGHNLHIYYGVWSRSESTEPFFYWLDIGEGKEVNLDRCPRNKLQSQCVKYLGPKERQEYEVVVESGRLVYKQSGVFVHTSDDSKWIFVLSTTKALYVGQKKKGSFQHSSFLAGGAITSAGRLVVKDGILKAIWPYSGHYLPTEENFREFISYLQENGVDLADVKRCPMDKDDEYPLLTKPDVTAASIAATKNVEKVAAATAAAAERLTETVSDDTDHAAVDEEGSMSEGEDEDADVPTATKEDEHKATSSSAANTAAAAAAAENHLPCRWSTGTGPRIRCVRDYPQDLQSRALEHVNLSPRLAAAGVAPATRKRDPVPSPRPSPGMILSPQLASVGFRPPVVALTLPDFKRSRLQ</aaseq>

Gene Sequence

<dnaseqindica>1..55#751..824#1303..1374#1988..2097#2553..2975#3081..3195#3317..3382#3483..3571#3682..3769#3868..4005#4146..4238#4333..4434#4680..5255#ATGCATAATTTAGAGCTAGTTGGTTACACTGTTAAACTTGCTCTCAGCGCTGCAGGTCTGCAGCTACCACCGTTCATCCGATCCAACTTAACACTAGGGACGGACGGACGACTCATTCTCCGTTGCTTTCATTTCATGCCGCGCTGCCAACCACCAAATCCGAACCCAAACCACATTCTCACACTCACACTCTCTCCTACCTCTGCAATTCCATTTCCATCTCCATTAAATTTCTCCCTTAAATTTGCAGTTGTTGGTGCCTGCCTGCACGAAGAAATTGAAGATAAAAATTAAAAAAAAATGTGTATGCATGCATGAAGGCAGACGCACGAGGGCGGACGAATGGGATGCATGCATTCACCCATCTTCTGACCATTTCTTGTTTGATTTTGAACTTTTCCATCTTCCACTATGCATGGTAGGTCATGGTCCAGGGGCACTAATATGTCTATGCATTTATTCATGAATTCATTCATGCCAATTTGGGGCTTTTTATATGTAAGCTAGTTACACATAGTGGATGACTGAGACTGGTGTGGCACATTGTTAACACTGGTGGCTTGTGTGCACATTTTGGAATGCCAGGGTAGGGCTGCTGCCCTTTTTTATCTTGTTTAAATTTGGGCATAGTTGGTTAGGCATGTAGTGGTACCACACAACACTACGAGTGATGGAAATAAATTGGAAAAAAAATGACAGGTTACTGTCCTGTTTGGATCCCTAACACTTGATTTTTTTTTTCTGAAACAGATGAGGTCAACTTTGTTCGGTATGAAATCCTTATAGGTTTAGTAATGCGGCGAAGCGATCGACTCAAGTTTGCGGTGAGTCAAAAATGCTCCATACAAATTGGACCCCCTAGTGGTTGATAGAGAGCGAGAAAGAATAAATATTTCTTTCAAAATTATGATGCGAAATCTTTGTATGTTTATTCTTAACTGGTTAGATATAGAGTAAAACTTAATATGGTAGCAAAGCCAGTGGATCCTTTATTCAGCACCGTAACACAACTCTATTCAATCCACATTTTTTTTAAAAAAAATAAAATATTATAAGATGTATATGTCTGATTTTTTCTCAAGTTAGATTAATTTATCATTTTAAAACAACCATCATTCTTTTCCATTTACTTATGACAGCTAGCTGTGGCATCCTAAGGAATTTTATTCATTTATATTCTTAAAAAAAATGTAGTTTTAGGGCTTACAAATTTCCATGTGAGTATCACAAAACCATCAGTAAATTACTATTTTGTACTGCAAGGGCGTTAGTAGAATTTTTTTTTTAAAAAAATTAATTCAGGATAGTTGGAGTGCTAATTCTCAAGCACTCCCTGAAAATGAGGGTCACGGTGCAAAAGAGACGCTTGACAAGGTGCAAAGTGTAAACTGAAGGAACGTTCAACCGGTTGAAAGCTCTGAAGTGACCCCAAGTCACAAAAGAAGCTTGAGGTTTCTTGGGCAAAACTCTCAAACCAAAAAAACCCCGAATTTCTCGGATTGATGGGACCCACTCCATAAGTGGCTGCTCTAGATTTCGGTATATATATTAGAGGGAGCAGTGACCCAACCTGATGTGTTCATCAACAACCGTAGCCACATCGCGTTCCAAAACAAATTTCAGAGAATTATCTCAGCTCTCAGAACCTTCGGCTATTGTTTGATCTTTCTCTGTCCCTTTGGGAGAAGAAGAACTCCGTTATTGCTTGGGGTGGCTAATTTCAGATAATCAGGTGAGGAGCTTGGTGTTGCCTCTTTTTGCTTCTGGCAAATTTTGATCCAAATCTTCGGTTGTTGGGTTGGGATTCTTGCTGTGGATTAGAATTGGTCTAGGATGTGCTGCTGGATGCAGAGTTCCTCAGTCAAAATGTTGATCTTTCATGCCATTCTGAAAATCTATCAACTTTTGCAGTGCTTGATGTGATGCATACCAAATTTCTTATCAAATCTGTTTGCATCTTCTTGGTTTTCTCTTTCTTGAAGAACAGCAAAAGTCTATACGTTTATGGGAAGTTTGGAAACTTTCTTCTGATGCCTTCCTGCTGTTCGAGCTCTTCTTAGTTTGCACCTTCTTGAGTTTCCCCTGTTTTTCCTCAAGGTAAGTTCAGAGTACCAAAGAATTGGGCAAAAGAAAGCGATAGAGTTGCTGATTCTTCTGGTCTCTTGGATTCTGTTCAGCTGGATATAATGCAGGCAACTGTGCACGTTTTTTGTGGTGTTGAATGCAGCAACCCTGATTGAAAATAGAAAAAAAGAGAAGCAACTGTGTTGTAAAAGTGCATGTTTAAAAGGCATGGCTGCTACCTCGCAATCAACTTTTTTTTTAGTGCTGATGTAGTGCTAGTTGCAGCAAATGCATGAACATCGATTTGGTCTTGAGTCATTTGTGCCGGCTACCGGTTGTTACTTAGTGTTTGGTTCTTCTCTCTGACTTTGACCATATCACAGCGAGCTGAATTATTCGTTTTTTTTTCTCTTTCTTTGTGAGTTTGTTTTTGATGACTGTTTCACCCTGAATCTAATTTGCAATCTCTGACTTTTTTGCATTTGCAGAGCAGAAGATTTCAGTTTTATGGGAGTGCATCAGCATGCATGGGGTGAAGTTGGCATCGAGATCTTCAGCCCAAGGTCCAAGCATATAGCCATGGTGAACAAAATCTCACCCTGGGATGAACAAGAGAAGATGGCCTTGAGAAGTAATGGAGCATTGGTGAAGTCACTGAGCTTCAAAGAATGGGAAGGAGGTGAACAAACCAAAAAAAGTTCAGTCAACCACAAGAACAGGCCGAGCCGGATCAACGTCGTCGTCGACAACCGGAGAAATTCAGACATTTTCATGGCAGAATCAAGCCCGATTGTGTCTTCCAGCCCCAAATGTGAGCTTGATGCTGCAGCAGTGAAGGTTCAGAAGGTGTACAAGAGCTACCGGACGCGGCGAAACCTCGCCGATTGCGCAGTCGTCGTCGAGGAGCTATGGTACACATCATCTTCTTCAGTTAATCTTGAGCATTAGAACAGTTAAAATTCTTTGTGTTAAGAAGTTCAGAGTTTTTTTTCTTAACTGTAGTGTTCTTGGTTCAGGTGGAAGGCATTGGACTTTGCATCGCTGAAGCACAGCTCGATATCATTCTTCAATGGCGAAAAGCCCGAAACCGCGGCGTCGCGGTGGGCAAGAGCAAGAACAAGAGCAGCCAAGGTACTGAATTTTTTATAATCTATTTACAGTTGTTCATCGTCAGTCCAAAAATGCTCTTCAGATGCCGGCTGTTTCTCATCGAAATTGCAGCTGATGATGCAATTATCTTTGGTCTGATTAGGTTGGAAAGGGGTTATCGAAGAACGGGAAGGCTCAGAAGCTGGCATTGCAGCACTGGCTCGAAGCTGTAAGTCACATGCCTCTTAATTCTGTCACTAAACTATGATCCAGTGAGATTGTTGCTGGTGTTAGTTTACTAATCCTGCCGTTTCCTTGTGCTTGGACAGATTGATCCGAGGCATCGATATGGCCACAATTTGCATATTTATTATGGTGTCTGGTCCAGGAGTGAGAGTACAGAGCCATTCTTTTATTGGTAAATAACCTGAAAATATTCTGCCTAGTATACATAGCCTAATACTTTGTGTTCACTTGAAGCCTCTGACTAATAACAATGTGGTAATTTTTATACATGTTGATTAACAGGTTGGACATTGGGGAGGGCAAAGAAGTAAATCTTGACAGGTGTCCTAGGAACAAGCTTCAGAGCCAGTGCGTCAAGTACCTTGGACCAGTATGTTCCTCAACCCTAGCAAATATGAACAAAATGATTCAAAATTCAGTAAACTGAATAAGTGAAATCGTGTACTAAATATGTTTTGAATTTTGCAGAAAGAGAGGCAGGAGTATGAGGTTGTTGTGGAGAGTGGCAGGCTTGTTTACAAACAGTCTGGAGTTTTTGTCCACACTTCAGATGATTCCAAGTGGATCTTTGTCCTCAGCACAACCAAGGCATTGTATGTTGGCCAGGTAACTGAAAATTTCCAGCTCATTTCCCAGCAAATCTGTATTCACACCGACACGCGGATAAGCCGCGATATCGGTGCCAATTTCCATATCATGTTGGTACAATTCTCTGAATTTGTTCCGAAATTTTGACTCTGGTGCAGAAGAAGAAAGGGTCATTTCAGCACTCCAGCTTTCTGGCTGGTGGAGCAATCACATCTGCTGGGAGATTAGTGGTCAAAGACGGAATCCTCAAGGTTTGTTCATATAGAGAAGAAGAGCATTATGAGTTTAATTAAAGAAACAATTTTTGTCTGAATAATTGATGATGGTGTTGTGATGTTTCTTCAGGCAATCTGGCCTTACAGTGGTCACTACCTCCCAACCGAGGAGAATTTCAGAGAGTTCATCAGCTACCTTCAGGAGAACGGCGTCGACCTTGCCGATGTCAAGGTAAATGTAAGAAAATTCTCAACCCCAACATGATCATCTTTTCATCAGATTAGCACAAATTATTACTATCTCCATGCGTTTTAATACTACGAATTTAGACATGCAAAATGTTCAGATTTATAGTATAAGAAAATGTCATATTCAGTTCTAAATTCTTATATTTTATAAATTCTTATATTTTATAAAGAAAGATTTTTAATTAATTAATTAACTAACTGGATGTGAAATGCTTTGCTTTCTTTCAGAGATGTCCCATGGACAAAGACGACGAGTACCCATTGCTGACAAAGCCTGACGTCACCGCCGCCTCCATTGCCGCCACCAAGAACGTCGAGAAGGTCGCCGCCGCCACCGCAGCCGCAGCCGAGCGGCTGACCGAGACCGTCTCCGACGACACGGACCACGCCGCCGTCGACGAAGAGGGCAGCATGAGCGAAGGCGAGGACGAAGACGCCGACGTCCCAACGGCAACCAAAGAAGACGAGCACAAGGCGACCTCCTCGTCGGCGGCGAACACCGCCGCCGCCGCCGCTGCCGCAGAGAACCACCTGCCGTGCAGGTGGTCGACGGGGACGGGGCCGAGGATCCGGTGCGTGCGCGACTACCCGCAGGACCTGCAGTCGAGGGCGCTGGAGCACGTCAACCTGTCGCCGCGCCTCGCCGCCGCCGGGGTGGCGCCGGCGACGAGGAAGAGGGACCCGGTGCCGTCGCCGCGGCCGAGCCCCGGGATGATACTGTCGCCGCAGCTGGCCTCCGTGGGCTTCCGGCCGCCGGTGGTGGCGCTCACGCTGCCGGACTTCAAGAGGAGCAGATTGCAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018646

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018646&oldid=47402"