BGIOSGA018674

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018674| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018674, complete gene.| tag = OJ1111_...")
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Gene Name

BGIOSGA018674

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018674, complete gene.

LocusTag

OJ1111_A10.13

Ensembl Transcript ID

BGIOSGA018674-TA

Ensembl Protein ID

BGIOSGA018674-PA

Length

7149

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5594780..5601928

Sequence Coding Region

5601635..5601928,5601384..5601496),complement(5601196..5601307,5599146..5599322),complement(5598895..5599011
,5598205..5598307),complement(5598028..5598075,5597268..5597365),complement(5597057..5597171
,5595596..5595678),complement(5594955..5595513,5594780..5594829

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5594780..5601928 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5594780..5601928 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGAGCGTTCGCGCGAAATCTGGCGGCCATCATCCCTCTCGCGCGCTGCAATGCGACGGCGACGACCGCGGCGGCGCCGTCCTCCCTCGTCCTCAAGGTCGGCGACACGCTGCGCGAGCGGCGGCGCTTCACGGATGGGGAGGTGGAAGCGTACGCCGCGGTGAGCGGCGACCGCAACCCGGTGCACCTCGACGACGCCTTCGCCCGCCAGGTGGGAGGGTTCGGCCGCGGCCGCGTCGTGCACGGCATGCTTGTCGCCTCACTCTTCCCCGCCCTCATCGCCGCCCACTTCCCTGGAGCCGTGTATGCGAGGCAGTCGCTCAAGTTTGCGGCACCGGTGTATGTCGGCGACAAGGTTCTTGTGCAGGTTCAGGCGCTGCACATCAGGGCCTCCACAAAACACATTGTCAAATTCGGAACCAAGTGCTTCACGAGTGACAGTGATGACCTCCTAGCTGTCGATGGTGAAGCTATGGCTGTGCTCCCCTCGCTTTACCTCAGACAACAACTGAACCAAGCCTCACTCGTGTGCCACTGCCCAAACTGGCAGATCTTGATAGGTGGCTTTGCAATCTTTGGCCCCCTGAACCTGTCCTTCTCCATGGCTGGGGCCACCACCACCTCCTCTCCCCTGCGGAGGATGGAGTCTGTCTGCCGCCACCTCCTCCCAGCATCACCGCCTATCCTTTACCAGAATCCGTTAGGTGCCATCAGGCTGGAGTCATCTCCAGTGATTATTGGGGGGATGGTGCTGGACATCCATGCCAAGCCATCCATGCAGCCGCATCCTGGAACGACTGTGCCTGGGATGGTTAAGTACGTCAGTGGGGGAGTAGCAAGAAATATTGCCGAGTGCATTTGTAAGCTTGAGACTCGACCATTCATGATTAGTGTTGTTGGAAATGATATGGCAGGGGATTTCCTTTTGAAATACTGGAGGTCGGCTGGACTATGTACAGATGGAATACTGCAGATTGATGACGTAACAACCCCAATAGTATCAAATGTGTTTGATGGGAGCGGTGAATTAATTGCTGGCGTTGCAAGTGTTGGGGCAGTTGAAAAATTTCTCTCTCCTAGCTGGATATGTCAGTTCCGTCTTCATATCTCCACTGCACCTCTACTAATGCTTGATGCAAATTTATCTCCTGATTCACTTGAAGCCGCCTGCAAAATAGCACATGAATCAGGAGTGCCTGTGTTTTTTGAGCCTGTCTCACTTGCGAAGGGTTCAAGGATTGCACCAATTGCAAAATATATTACTTACACTTCCCCAAATGAGATTGAGCTTGTGGCAATGGCAAATTCATTATCTCCTCCTGAGAAATATACTTTTGTCAAAATGGAGCAGTCCAAGAACAAAGCCAAAGCTGTAGAGTATTTGTTTGAAATGCTCAGCCCAGCAATGTTTTTCCTCCTCGAAAAGGGCATAAAGTTTCTTCTGGTGACGCTTGGCTCAAATGGTGTTTTTGTTTGTTGCAAAGAGAGCACAAGTTTGATGGACCAGCGAAAGTCTGAAATGATGTCTTTCTCAACTCCACTACTTCAAAAATTGGAGCGATGTTTTCCATCTAACATGCTTGTAGATTTGCCTAGAGAAGGCTCTTCCAGAACATGTGTTTTTCATTTTCCTGCAGTATCTGCCTCAGTGGTTAGCCTCACAGGTGCTGGTGATTGTTTTGTTGGTGGAGTCATTTCAGCTCTATGTGGAGGTTTGGGTATGATGCAATCTGTTGCGGTTGGGATTGCTATAGCAAAATCATCAGTGGAATCTGAAGCTAATATACCTGATAAGTTTTCTGCTGCAACTATCGCAGATGATGCAAGAAGAACATTGCTATCAGCTAAAATGATGTGGTGCAAATAA</cdnaseq>

Protein Sequence

<aaseq>MRAFARNLAAIIPLARCNATATTAAAPSSLVLKVGDTLRERRRFTDGEVEAYAAVSGDRNPVHLDDAFARQVGGFGRGRVVHGMLVASLFPALIAAHFPGAVYARQSLKFAAPVYVGDKVLVQVQALHIRASTKHIVKFGTKCFTSDSDDLLAVDGEAMAVLPSLYLRQQLNQASLVCHCPNWQILIGGFAIFGPLNLSFSMAGATTTSSPLRRMESVCRHLLPASPPILYQNPLGAIRLESSPVIIGGMVLDIHAKPSMQPHPGTTVPGMVKYVSGGVARNIAECICKLETRPFMISVVGNDMAGDFLLKYWRSAGLCTDGILQIDDVTTPIVSNVFDGSGELIAGVASVGAVEKFLSPSWICQFRLHISTAPLLMLDANLSPDSLEAACKIAHESGVPVFFEPVSLAKGSRIAPIAKYITYTSPNEIELVAMANSLSPPEKYTFVKMEQSKNKAKAVEYLFEMLSPAMFFLLEKGIKFLLVTLGSNGVFVCCKESTSLMDQRKSEMMSFSTPLLQKLERCFPSNMLVDLPREGSSRTCVFHFPAVSASVVSLTGAGDCFVGGVISALCGGLGMMQSVAVGIAIAKSSVESEANIPDKFSAATIADDARRTLLSAKMMWCK</aaseq>

Gene Sequence

<dnaseqindica>1..294#433..545#622..733#2607..2783#2918..3034#3622..3724#3854..3901#4564..4661#4758..4872#6251..6333#6416..6974#7100..7149#ATGCGAGCGTTCGCGCGAAATCTGGCGGCCATCATCCCTCTCGCGCGCTGCAATGCGACGGCGACGACCGCGGCGGCGCCGTCCTCCCTCGTCCTCAAGGTCGGCGACACGCTGCGCGAGCGGCGGCGCTTCACGGATGGGGAGGTGGAAGCGTACGCCGCGGTGAGCGGCGACCGCAACCCGGTGCACCTCGACGACGCCTTCGCCCGCCAGGTGGGAGGGTTCGGCCGCGGCCGCGTCGTGCACGGCATGCTTGTCGCCTCACTCTTCCCCGCCCTCATCGCCGCCCACTTCGTACGCCGCCCCTCTCGTCTCTCTCTCTCTCGCTCGCTCTCATGCCTGCCAGATGGTGCACCGGCATTTCGTCGAGCACTGCATCGGCATGACGTGCTGGCCTGGCCCTTCTAGTATCTGATGCTGATGCTAATGCAGCCTGGAGCCGTGTATGCGAGGCAGTCGCTCAAGTTTGCGGCACCGGTGTATGTCGGCGACAAGGTTCTTGTGCAGGTTCAGGCGCTGCACATCAGGGCCTCCACAAAACACATGTATGCTCAATTCATCTTTTCATTTCCTAGTCATCAAGACTAGATTGTTTGGAGTGAATCATCTTCTTTCTGACAGTGTCAAATTCGGAACCAAGTGCTTCACGAGTGACAGTGATGACCTCCTAGCTGTCGATGGTGAAGCTATGGCTGTGCTCCCCTCGCTTTACCTCAGACAACAACTGAACCAAGTGCCTCCCATCGTTGATTAAAGACTGGAAGCATCGTCAGGAGTGGGACAATATGTGATTTATGTTCTTTTGGGTCTGTAGATGCTTTGACAAGATAGGAAGGCTATATGTTGTTTTGCTGTTCTCGGTAGTAGCTGGCTCCCTTGTTAAGCTGGAATTCCCAGCCTTCTGTACTTCATCAAACCTTTATTCCGTTTCCAATAGAACCTGGGGTAAATCCCGTTATAAAAAAAAAGGGTACATCACTGATGGTAGCACTGGCTAGTAACTCTCAGTGCACTCCATTACTCTAAATAGAAGTCCCATGGTTTGGGTCCTTTGTTGTTAAAACATTTATAATGTCTCATGATTTAGTCAGACAGCATCTTCAAAACTGAGCTTGCAGAGCAATTTGTTTGGTTTGTGTTGCTCACTTTAGTAGAAGATGATGTAAAATCTGCACTCGTGAGCGCCTGCTCAACACACAATAAAAGTTCTTGACATATTGTTCAAGTCATATGGGTTTTAACTATAACATGTCAACCTGGTTATTGAACTTTTGCATCATGCAAAGAGCAACATAATAACTAGAAAGAGCGAGTGTCCCAGCTCCTCAGCATTATGCCACTCAGCCGCTGCCACTGGCCACCATGCCTTGTGCATCGTTCCTAGGTCTTTGGCATTATGCAATGCCTACCATGACTCTGTTGGTGGAAATGTTGATATACTAGGAACACCATTTTGAAGTATCATAAATTGAAAGTGAGTTAGCACTCAGCACTCAGGCACATATGGGCATTGGATCAACGCCAACCAGGACCAGAAACAAAAGTCTAGTGCAAGTCAGCTAGTAACTGAACAGGTAGTTTTTCATCTTTTTACAATATTTTTCTTTCTCTGATCTCTGTTTTTTCTTTTCCTGGATGATTGGTATTTGATTGAAATGTGAAATATGAAATCAATGAGTTCAAAGATGGCCTGGTTTTATGATTTAGATTAACTTGAATCAATCAAATATGAAGGGGAACATAGGCATTCTGTCTGTCTTTAGCAAAGTAAATATGTAGTTGCTTGTTTGTATGTCAGCTTTGAGCCCAACCAGCTTTATTCTTGCCATGCTTTTCTCAATAAGTCTCAAGTATGAGCATTATGAGACTTCCAATTTCATCTTAATAACTTCACTGATAACATGTAAATTGACGATAGGTTCAAGCCTGTAAATATTATTAACTTCATTGAGAGAGGCAATTGCGCTGCGATGAGCTGCTCTGCCTCTAAATTCTGAGAACAAACCAATAGCAAGAACTTAGCAAAAAGGGCATTGCCTGCCCTCTTGTGCTAATCCATTGGTAATGTTGCTACTGCTACTGCTAAGTACTATACTGCCTCACTAGAAATAGAGAAAAAAATACTCCATGTGACAAAGCTAAAACTAGAATAATACTATCACATGGTTTTCTATCATTGGTATTCAGTTATTGCAACTGAAGAATGCGAAAGTTGGTATCATGTTTTAGTGGCATGAAATTAACTATTACGCGTGATAAGGAGGTGGTGTTAATCTCGTATCAGGAATATGTCAGGATGATGTTAAGCATTTAGGGGCTGTTTGGTGCGTTGCCAAAAATTATGTCCCTTATTTGGTTTGTAGCCACAAATTTGGCAATGCCAATTATTTTGGATTGGTTAAGTTTGGTAGCAATCCAAACAACCAACTCTACCAAAATTTTTGGCTTACCAAATCTTGCTATAGCAAAAAATTGGCAAGGCTAGCAATGGTTGAGAAGAAACAAACACTTAGATTTTTAGCTTATTTCCATCTTTCAATTGCTGATGTTCTGGGTATGGATGCTGCATCTGTGGCATAAACTAAATGAAATCCTCTTTCTCGTAGGCCTCACTCGTGTGCCACTGCCCAAACTGGCAGATCTTGATAGGTGGCTTTGCAATCTTTGGCCCCCTGAACCTGTCCTTCTCCATGGCTGGGGCCACCACCACCTCCTCTCCCCTGCGGAGGATGGAGTCTGTCTGCCGCCACCTCCTCCCAGCATCACCGCCTATCCTTTACCAGGTACGGCTACCTTAAGAGGAACTACTGCAACTTATCCTCTCTATAGCCTGCAGTCCCATCGAGTACCTTTCTAACTAGTGTTTCTTGGGCTTCAGTTTTCTTGTGTTCTAATTTTTATGTTGTTTTCTGCACAGAATCCGTTAGGTGCCATCAGGCTGGAGTCATCTCCAGTGATTATTGGGGGGATGGTGCTGGACATCCATGCCAAGCCATCCATGCAGCCGCATCCTGGAACGACTGTGCCTGGGATGGTAAACCACCCATCCAGCTCTTTATTAACTTCTTAGCTTGAGCAAACTGCTTATTTGCTGGTATGCAAGAAGGATGGCATATGTGTGTGATTGAATGGATCAGCATGACCAATAATACTATTCAATGTAAACTAGTGTTGAATTCATTATATGAGGAAGAAGGTTCTGCAGGATGATGTTTGGGTTGTGATATCCATAAGCTTGGTACTGTATGCATCTTATTCATACAGAGGTTTAGGCCATAAATCTTGTGAGCTTTAACTTCTTCCATTTCAATCATTTATGAGAAGTTGAAGTAGGATGTTTTTTTTAAACCTTTTTAATTTTTAATTGTAAAAATAAACCCTTCCAAAACTTATTTTCAAGATCTGAACCTTTTGGCCATGCCAACCAGGCTGGCGTGGCAAAACAATACTGTCACGCCTGCTACGGGTGGTGTGTTAGTGTTGTTTTGTCATGCCAGGCGGGCTGGCGTGGCCAAAAGCTTCAGATGGAAAAAAGTTTTGGGAGGGTCTACTTTTAAAATTAAAAATTCAAAAAGTTAAAAAAATTAAAAAATCAAGTAATAATGCATTTGAATTTCCTAGGTTAAGTACGTCAGTGGGGGAGTAGCAAGAAATATTGCCGAGTGCATTTGTAAGCTTGAGACTCGACCATTCATGATTAGTGTTGTTGGAAATGATATGGCAGGTATTTCTTTTATCTATTTGTGAAGATATAGTTTTTTTCTAAATTGGTTTACTCATTTTGAATTACTCTGTCCTTTTCTGCTCTCTGGGTAGTTATTTGCTTCAATACTTTCCATTTTTTCTACTGCAGGGGATTTCCTTTTGAAATACTGGAGGTCGGCTGGACTATGTACAGATGGTAAGTGTGAAGATATTCATATTGTTGTATACATCCTTGAAATTACAGTCTAATCCTTGTTATGTTTGTTAGGAAAGGCTGTAGTTTTTCATGTGTAGTGAGATAATAGGCTCATTATTTATTTTATTTGCATTGCGTTACTGGTTGAATATCTATAGATATGGGCCTACTTTTGATGCAACAACCAATGCTGAAATTACAACAGCAACATATTTAAAGGGTATTTTTTTGTTCTCTACAAAATATGTACTCCTTTAAAAGCCTCTAGTGGTGGTGGCAGTGAATCTGCCACCCCACTATTGCTTTTGTAGTTCTGTTTGGTATTCAAGGGGTTCAGATAAAATGAACTTATTTCTTATAAATATATACTCACTTTGGTCATAAATTTTTATGTTTAGGTTAAGATTCAGTCAAACTTTTGAAACTTTGACCATCAATAATTTCTCAAATGGCAAAAATGGAAAATGGTAAGCACAGCTTGTCCTTGAAAATTACTATCATAATGTCAAAAACTTTTTAGAATTTATAATATTTTAATATAAGATTGATGGTCAAAATTTTAGAAGTTTGGCCAAATCTTTTCCTAAATATCAAATATTATGACCGGAGGGAGTACATAGTTTTCCTTCTGTTAGCTAACACTGTTGCTAATAATTACATAGGAATACTGCAGATTGATGACGTAACAACCCCAATAGTATCAAATGTGTTTGATGGGAGCGGTGAATTAATTGCTGGCGTTGCAAGTGTTGGGGCAGTTGTAAGAATTTTGCAGCACATTGTGTAGTGTTCGATCTGTATCAACGCTAATGTTGACAAGTAATCACTGTACTTATCTCCATTTCTTTTTGGGCAGGAAAAATTTCTCTCTCCTAGCTGGATATGTCAGTTCCGTCTTCATATCTCCACTGCACCTCTACTAATGCTTGATGCAAATTTATCTCCTGATTCACTTGAAGCCGCCTGCAAAAGTAGGTTATTCCACCTTATTTCTTTACTTAGGCAGTGAGCTCCTAAGCTTATGTGATAGGCTGATATAGCTGATACTAGTATGCATTTGAACCAGGTAGAATAAATAAAGGGGTTACCTAATTTGCATGCATGCGGTGCTGGATCTTTGTGTTTCCTTTCCAACAAGGATTGCAGCCGACACCACTTTTTCAATATAATAGCATCTGTGTGGCTGCACCTAACCTTCCCTTGCCTGCAAACAAGGATCTTTTGTTGTCTTGTGCCAACCGATGAGAAAGTCTTCTGCCAGAAGAAATGAAAAAGTAATAATGTATACAAGAAACATTTTTAGAGATATGCTGTTTGCAGGCTTTTTATTTTTAGCTCTATGATATAATCTTACAAAAAAAACAAGAAATCACGACCTTACGATTTGAAATTTTTCATCTCAAGAAAATCATGAGCTTTCAGCTTGATTCCAAAACCTTTTAGCTCAAGAAAACATGAGCTTTCGACTTCACCTTGAAAAACTTTCAACTCGAGAAACCAGCAGCTTTCTATATCCATTTGGAAACTTTCAACTCAATTTGAGTAATTTGGAGGTTTTAACTCAATATCAGGAATTCTAAGCATCTTTGAAGGCTAGAATGAAAATTTGAAGTAAGAAAATCAGGACAATCTCTGCAACACTGTGGAAACGTGAAACCTAAAAATTTCAAACTTTCACCTTAACTCTGAAACTTTTACCTGGAAATAAACTTTCAAACTTTCACCTTAACTAATTTAATTTTATAACTTTCGAACCTAATAATAGCAGAAATCTGTAATTCTATCAAAAGGGGAAATGAGTGAGAAGAATGTTCTTGTCATGCACTATTGGTGTTCCTAAAGAGATTTGAAAAATAGGTGCCTTTATGTTGAACCTGTCAATGGAACAACTGCCCCGCAGCGCTCGACATCAGTGTGGCTGATCAGCAGGGTACGAATGAGTGCCTCGCAACAAGCTTGGAATACAGCAGTTTTGAGTTTCTTATCTGATTAGGTGTCAATATTCTTAACATCTACCCTATTATACTTCCTCTAGTCAAAACTCAAAAATATTTGCGGTTCCCAGTACCACATAAATTTAACTGGACGGGGTACTAATGTATGCAATTCTAATTGTAAACACTCCCTAATTTTATAGAATTGTATTATTATTGAACTGCATTATCTCTGACTCTGAGTATACTGGTGCACTACTCATGTCCCTCCTGACCATCGTTTTGAGGAGCTTCCTTGACAAAAATGAGAAAGACAGTCCTGTCAATTATTACACCATTATGTTTTTGTCCTAATCTCTACATTGCATCAAAAAGTTGATGACATGCATGCTATTTTCTTCTTTTTTTTCCCCAGTAGCACATGAATCAGGAGTGCCTGTGTTTTTTGAGCCTGTCTCACTTGCGAAGGGTTCAAGGATTGCACCAATTGCAAAATATGTGAGTGCAAAGGATTGAATTGGTACTTATTACTATGTATCATGTTAAGGTCTTGTCACTTAATAATTTCCTGGTGATTCAGATTACTTACACTTCCCCAAATGAGATTGAGCTTGTGGCAATGGCAAATTCATTATCTCCTCCTGAGAAATATACTTTTGTCAAAATGGAGCAGTCCAAGAACAAAGCCAAAGCTGTAGAGTATTTGTTTGAAATGCTCAGCCCAGCAATGTTTTTCCTCCTCGAAAAGGGCATAAAGTTTCTTCTGGTGACGCTTGGCTCAAATGGTGTTTTTGTTTGTTGCAAAGAGAGCACAAGTTTGATGGACCAGCGAAAGTCTGAAATGATGTCTTTCTCAACTCCACTACTTCAAAAATTGGAGCGATGTTTTCCATCTAACATGCTTGTAGATTTGCCTAGAGAAGGCTCTTCCAGAACATGTGTTTTTCATTTTCCTGCAGTATCTGCCTCAGTGGTTAGCCTCACAGGTGCTGGTGATTGTTTTGTTGGTGGAGTCATTTCAGCTCTATGTGGAGGTTTGGGTATGATGCAATCTGTTGCGGTTGGGATTGCTATAGCAAAATCATCAGTGGAATCTGAAGCTAATATACCTGATAAGTTTTCTGCTGCAACTATCGCAGGTCTGCTATAGTAATTTGTTTTCATCTTGTATAGTGTACTTCTGAAATTTCAGATTAGATCTTAGTGCTGTCAAATTTATTTTATTGCACAGGTATAACTCCTTGCATTTCCATTTCTCATGCAGATGATGCAAGAAGAACATTGCTATCAGCTAAAATGATGTGGTGCAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018674

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018674&oldid=47430"