BGIOSGA018678

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Revision as of 02:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018678| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018678, complete gene.| tag = P0683B1...")
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Gene Name

BGIOSGA018678

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018678, complete gene.

LocusTag

P0683B12.3

Ensembl Transcript ID

BGIOSGA018678-TA

Ensembl Protein ID

BGIOSGA018678-PA

Length

4703

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:5398880..5403582

Sequence Coding Region

5403439..5403582,5403314..5403361),complement(5403132..5403203,5402940..5403039),complement(5402581..5402676
,5402403..5402464),complement(5402191..5402292,5402008..5402100),complement(5401754..5401906
,5401606..5401661),complement(5401301..5401478,5400983..5401180),complement(5400808..5400906
,5400566..5400697),complement(5400347..5400483,5400135..5400234),complement(5399933..5400028
,5399673..5399773),complement(5399468..5399573,5399286..5399375),complement(5399077..5399206
,5398880..5398977

Genome Context

<gbrowseImage1> name=IndicaChromosome05:5398880..5403582 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:5398880..5403582 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGACCGGAGAAGCGGCGGCGGCGGCGGCGTCGCCGCCGGAGCTGGCGTCGTTCCTGGCGATCGGGCTTGACCAGCGCACGGCGGAGAACGCCCTCGCCAACCGCAAGGTCACCGCCAACCTCACCGCCGTCATCGCCGAGGCTGGTGTTAGTGGGTGTGACAAATCTGTGGGGAATCTTCTCTACACTGTCGCGACGAAGTATCCGGCGAATGCCCTGGTGCATCGTCCCGTTGTCATCCAATACATTGTGTCGTCAAAGATCAAGACCCCCGCGCAATTAGATGCTGCTCTGTCGTTTCTTTCTACTTTGGGTCCTGATCCATTGGACACAGCAAAGTTTGAAGAGACATGTGGAGTGGGGGTGGTTGTTTCAACTGAAGAGATTCAGTCAATGGTCACTGATATCCTGAAGGAAAACATGGAAGCCATAGTTGAACAGCGATATCATATAAATGTTGGCAGCTTGTGCGGACAGGTTAGGAAGTGGCACCCCTGGGGCGATGCTAAGTTCATAAAGGAGGAAATTGATAAAAGGCTTACAGAGATTCTTGGTCCAAAGACAGAAGCTGACAATGTAAAGCCTGTGAAAAAGAAGAAGGAGAAGCCCGCAAAAGTTGAGGAGAAAAAAACTGCGGTAGCTGCTCCTGCTCCACCATCTGAGGAAGAACTTAATCCCTACTCCATATTTCCTCAACCGGAGGAAAACTTAAAGGTCCATACAGAAATTTTCTTCAGCGATGGAAATATATGGAGAGCACACAACAGAAAGGACATTTTAGAGAAACATCTTAAAGCAACTGGAGGAAAAGTGATGACCCGCTTTCCCCCAGAGCCTAATGGCTACCTTCATATTGGTCATGCTAAGGCTATGTTTATTGATTTTGGACTGGCTAAAGAGCGCAACGGACATTGTTACCTTAGGTTTGATGATACAAACCCTGAGGCGGAGAAGAAAGAATATATAGATCACATTCAAGAAATTGTCCGATGGATGGGCTGGGAGCCTTATAAAGTTACCTATACAAGTGACTATTTCCAAGAATTATATGAACTTGCTGTTTGTTTGATAAAGAAGGGACTAGCTTATGTCGATCACCAGACACCAGAAGAGATAAAGGAGTATAGAGAAAAGCAAATGAATAGTCCATGGAGGGATAGGCCTATAGAAGAGTCACTAAAACTGTTTGAAGATATGAGGCATGGGTTGGTTGCTGAGGGAAAGGCAACTCTTAGGATGAAACAAGACATGCAGAATGATAACAAGAACATGGCTGACTTAATAGCATATAGAATAAAGTTTACACCTCATCCCCATGCTGGCGACAAGTGGTTTATCTATCCAAGCTATGACTATGCTCATTGTTTGGTTGACTCTCTTGAAAACATTACCCATTCGTTGTGCACACTAGAATTTGACATACGTCGTCCTTCATACTACTGGCTGCTCGTATCCCTGGACCAGTACCAGCCATATGTTTGGGAATATTCAAGGTTAAACATATCAAACAATGTTATGTCCAAGCGAAAGCTAAATAAACTTGTGACAGAGAAGTGGGTAGATGGGTGGGATGATCCTCGCCTGTTGACACTTGCAGGACTACGGCGGAGAGGAGTATCATCAACAGCAATTAACTCCTTTATTCGTGGAATGGGCATAACAAGGAGTGACAACAGTTTGATACGCTTAGAACGCCTTGAGTATCATATTAGAGAAGAGCTCAACAAAGTAGCTCCTCGTGCTATGGTTGTTTTGCATCCCCTAAAGGTTGTTATAAATAATTTAGACTATGGAACAATAATAGACCTTGATGCAAAAAAGTGGCCCGATGCTCCAGGAGATGATGCTTCGGCCTATTACAAGGTTCCATTCTCAAGAACTGTCTACATCGAGCAGTCTGATTTTCGTGTAAAGGATTCAAAAGATTATTATGGGCTTGCTCCTGGTAAAACAGTACTACTAAGGTATGCATTCCCAATAAAATGTACGGAAGTTATCTATGGTGATAATTCAGATAATATCATTGAAATCCGAGCTGAGTATGACCCTTCGAAGGCTACAAAACCAAAGGGTGTGTTGCACTGGGTTGCCGAACCTTCTCCAGGTGTTAACCCGCTCAAAGTGGAAATCAGATTGTTCGAGAAATTATTTCTTTCAGAGAATCCTGTGGAGCTTGAGGATTGGCTGGGTGATCTCAACCCACGATCAAAGGAAGTGATAAAGGGTGCCTATGCCGTGCCTTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAGAACCGTTACTCTACGGGATTCCTATGGAAAAGCTGGACCCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MATGEAAAAAASPPELASFLAIGLDQRTAENALANRKVTANLTAVIAEAGVSGCDKSVGNLLYTVATKYPANALVHRPVVIQYIVSSKIKTPAQLDAALSFLSTLGPDPLDTAKFEETCGVGVVVSTEEIQSMVTDILKENMEAIVEQRYHINVGSLCGQVRKWHPWGDAKFIKEEIDKRLTEILGPKTEADNVKPVKKKKEKPAKVEEKKTAVAAPAPPSEEELNPYSIFPQPEENLKVHTEIFFSDGNIWRAHNRKDILEKHLKATGGKVMTRFPPEPNGYLHIGHAKAMFIDFGLAKERNGHCYLRFDDTNPEAEKKEYIDHIQEIVRWMGWEPYKVTYTSDYFQELYELAVCLIKKGLAYVDHQTPEEIKEYREKQMNSPWRDRPIEESLKLFEDMRHGLVAEGKATLRMKQDMQNDNKNMADLIAYRIKFTPHPHAGDKWFIYPSYDYAHCLVDSLENITHSLCTLEFDIRRPSYYWLLVSLDQYQPYVWEYSRLNISNNVMSKRKLNKLVTEKWVDGWDDPRLLTLAGLRRRGVSSTAINSFIRGMGITRSDNSLIRLERLEYHIREELNKVAPRAMVVLHPLKVVINNLDYGTIIDLDAKKWPDAPGDDASAYYKVPFSRTVYIEQSDFRVKDSKDYYGLAPGKTVLLRYAFPIKCTEVIYGDNSDNIIEIRAEYDPSKATKPKGVLHWVAEPSPGVNPLKVEIRLFEKLFLSENPVELEDWLGDLNPRSKEVIKGAYAVPSLATAALGDKFQFERLGYFAVDSDSTAEELVFNRTVTLRDSYGKAGPK</aaseq>

Gene Sequence

<dnaseqindica>1..144#222..269#380..451#544..643#907..1002#1119..1180#1291..1392#1483..1575#1677..1829#1922..1977#2105..2282#2403..2600#2677..2775#2886..3017#3100..3236#3349..3448#3555..3650#3810..3910#4010..4115#4208..4297#4377..4506#4606..4703#ATGGCGACCGGAGAAGCGGCGGCGGCGGCGGCGTCGCCGCCGGAGCTGGCGTCGTTCCTGGCGATCGGGCTTGACCAGCGCACGGCGGAGAACGCCCTCGCCAACCGCAAGGTCACCGCCAACCTCACCGCCGTCATCGCCGAGGTAACCGCGCCGCCCTCCCGCTTCGGTCTCGCCGCCTTGCGTTTGGGGGACTAGCTAACCCATGCTTATGCCTGCAGGCTGGTGTTAGTGGGTGTGACAAATCTGTGGGGAATCTTCTCTACACTGTGAGCATCCGTCGCTGCTGAGTTATTATATGATAGTAGTATTGATCTAATTAAAATCTGTGAATTGGTGATAGTTAGTTTGTGTGTTAATTGGTTGCGCATTGGAGTAGGTCGCGACGAAGTATCCGGCGAATGCCCTGGTGCATCGTCCCGTTGTCATCCAATACATTGTGTCGTCAAAGGTGAGTTCTGTTGTGTGTGATTGTGTTGTAAACACTGCTGCTGTGTGGCTGAGTTCGTAAGTGTTGTGAACTTGACAAATTGTGGTTTCCAGATCAAGACCCCCGCGCAATTAGATGCTGCTCTGTCGTTTCTTTCTACTTTGGGTCCTGATCCATTGGACACAGCAAAGTTTGAAGAGACATGTGGAGTGGGTACGTTCTGTCTGGTTGAAATTACATTTATATTTATATGATTTCTCATCTTCTACAGTACTAAAGCTTGAAAGCTGTAGTGCCACAAGCTTTTGAAAAGTTGATGAATTCATACCTTGCAGGGCTAAAACAACTCTTATGTTGATAAGAGTCAACCACAATTTATTTTGCACATACTATAGTTGGCTGATAAATCAATAGTCCTTCAAATGCCCATTTTCAGCTCACTGTTGTTTAAGGGCCTGCGTTTTTTTCCCCTGCAGGGGTGGTTGTTTCAACTGAAGAGATTCAGTCAATGGTCACTGATATCCTGAAGGAAAACATGGAAGCCATAGTTGAACAGCGATATCATATAAATGGTTTGTTTTCTGCTTCATTTTCATTTTACTTTGTTATTGATGGTTTTGTTTTATCTTTCGATTTGTGATGTCGGGAAAGCTGGGCATCATTTGCTCCTGACTTTCTTGTTTTCCAGTTGGCAGCTTGTGCGGACAGGTTAGGAAGTGGCACCCCTGGGGCGATGCTAAGTTCATAAAGGTTTAATACATTTCATGGCTGAAATTATGGAGTTTTTTGTTTAATTGCTACTATTTATTACTAGTAACTTTGTGATATGGCTTGTACTAATTACTTCTGTTAATCTACAGGAGGAAATTGATAAAAGGCTTACAGAGATTCTTGGTCCAAAGACAGAAGCTGACAATGTAAAGCCTGTGAAAAAGAAGAAGGAGAAGCCCGCAAAAGTTGAGGTTTGTTACCTGAAATTCAATCAAGTTTTATGGCAGGACTGTTTAGTTATTAGCTCTGCCTCATCCAGTTTTGTTTCTGACAAAATATAGGAGAAAAAAACTGCGGTAGCTGCTCCTGCTCCACCATCTGAGGAAGAACTTAATCCCTACTCCATATTTCCTCAACCGGAGGAAAACTTAAAGGTAAGATGATTGTTATATAGGATATGCAATGATACTCCATATTCCTCAAAATAAAGAATTCTCTAATGGCCTTGAAGCTGAAAATTGTTCTTTACGAGTAGGTCCATACAGAAATTTTCTTCAGCGATGGAAATATATGGAGAGCACACAACAGAAAGGACATTTTAGAGAAACATCTTAAAGCAACTGGAGGAAAAGTGATGACCCGCTTTCCCCCAGAGCCTAATGGCTACCTTCATATTGGTCATGCTAAGGTTGTGACTATCCCTTTCACCTGTGATGTCAATTCTGCAAATGCTGGTTTCTCAAAATCTGAAATGATGCTTACAAGATTTTTGATGCACAGGCTATGTTTATTGATTTTGGACTGGCTAAAGAGCGCAACGGACATTGTTACCTTAGGTACGAAGGAATAGTTAGATGTTATGGTTCCAAAGGAGCCTTCAAGTCCATTGATTTGCCCTTTTCTTCCTTATATGGACATACTGCATTGCAAAACATGCTGACATGATTAATATCTGAACAACAGGTTTGATGATACAAACCCTGAGGCGGAGAAGAAAGAATATATAGATCACATTCAAGAAATTGTCCGATGGATGGGCTGGGAGCCTTATAAAGTTACCTATACAAGTGACTATTTCCAAGAATTATATGAACTTGCTGTTTGTTTGATAAAGAAGGGACTAGCTTATGTCGATCACCAGGTTTGTTTTCCTTGGATTGATAGTTGACTGCATTAATCATATAGCTTTTTAAATTGTTATCACTGAACGCCTCTTGAGAAAGCAACAGTATGTGTAAATTGACTATTGTATGCTTGCCAGACACCAGAAGAGATAAAGGAGTATAGAGAAAAGCAAATGAATAGTCCATGGAGGGATAGGCCTATAGAAGAGTCACTAAAACTGTTTGAAGATATGAGGCATGGGTTGGTTGCTGAGGGAAAGGCAACTCTTAGGATGAAACAAGACATGCAGAATGATAACAAGAACATGGCTGACTTAATAGCATATAGAATAAAGGTAAACAATTCGACATTATGGAGTTACTGTTTTCTGTGAAGTGTAGAATTTAATATATTTCTATATATCTACACAGTTTACACCTCATCCCCATGCTGGCGACAAGTGGTTTATCTATCCAAGCTATGACTATGCTCATTGTTTGGTTGACTCTCTTGAAAACATTACCCATTCGGTAATAGTTTCTCTCTAACTACTTTTGGTTGTGTGAGCCTTAACATGTTATCAGTTGAAATTATCAGTTGTACACACTAGAATTTGACATATGGCTGTTGCAATCACCAGTTGTGCACACTAGAATTTGACATACGTCGTCCTTCATACTACTGGCTGCTCGTATCCCTGGACCAGTACCAGCCATATGTTTGGGAATATTCAAGGTTAAACATATCAAACAATGTTATGTCCAAGCGAAAGGTATAGCGCTGATTCTTGTGGAGAATTATATCAATCTTATGATCCTTGATATATGGTTCTATAATATGGATTGGATTTGCAGCTAAATAAACTTGTGACAGAGAAGTGGGTAGATGGGTGGGATGATCCTCGCCTGTTGACACTTGCAGGACTACGGCGGAGAGGAGTATCATCAACAGCAATTAACTCCTTTATTCGTGGAATGGGCATAACAAGGAGGTAAGGAGAAATGTTTTACCCAAAGACATGCTTCCATCTTTCGATATCAGCAGAACTTTTTCTAGTTGTCAACATAATATACTGATACCATTATTTTATCCTTTCAATGCAGTGACAACAGTTTGATACGCTTAGAACGCCTTGAGTATCATATTAGAGAAGAGCTCAACAAAGTAGCTCCTCGTGCTATGGTTGTTTTGCATCCCCTAAAGGTTTAGCAATTGGCATTCTCTTTTTTTTTTTGGCAAAAGTTTTGTTATTTTTCTCTTTGTTAATTGACGCACTGATAGTATTTTCTTTTAATTTGGTAAATTTTAGGTTGTTATAAATAATTTAGACTATGGAACAATAATAGACCTTGATGCAAAAAAGTGGCCCGATGCTCCAGGAGATGATGCTTCGGCCTATTACAAGGTAATTCTTATGTCTGAATGACTTAATCATTTTGAGAATTAAAAATCTGGTTTAGTGGTTACAGAGTCCCTTTGGTTCTGCACTTCTGCTCAAAGATTAGACACATTGAGCAATATAAGTTCATCACTTCTCTGATTCTGGAACTGTGGTCATCCCTAGGTTCCATTCTCAAGAACTGTCTACATCGAGCAGTCTGATTTTCGTGTAAAGGATTCAAAAGATTATTATGGGCTTGCTCCTGGTAAAACAGTACTACTAAGGTACTAGTACATTATACATCTGTAGACTCTGTACTTAATTAGTTTGCTTACTTTGTATACTTTGTGGTCTCATCTATGTTTGCCGTCTGAAACTGATAGGTATGCATTCCCAATAAAATGTACGGAAGTTATCTATGGTGATAATTCAGATAATATCATTGAAATCCGAGCTGAGTATGACCCTTCGAAGGCTACAAAACCAAAGGTAACTAGGCAATTGAAATTCTTTTAGATCAGATGAGAATATTATTCTGCTATTTGAATTTATGAGATCATGATGTTGTGTACAATATGTAGGGTGTGTTGCACTGGGTTGCCGAACCTTCTCCAGGTGTTAACCCGCTCAAAGTGGAAATCAGATTGTTCGAGAAATTATTTCTTTCAGAGGTATAGCATTACACTCTCTTGCAAGTCCCTGTTGTACCGGAAATTATCCTTGCTGACATCACTTCTTGGTCTACATTAGAATCCTGTGGAGCTTGAGGATTGGCTGGGTGATCTCAACCCACGATCAAAGGAAGTGATAAAGGGTGCCTATGCCGTGCCTTCGCTTGCAACTGCAGCGCTGGGGGACAAATTTCAGTTTGAACGCCTCGGTAAACAATATTTGGATGGTGTCTTAAATCGGAAATAAAAAATAAAAAAAATGTTATGGTGTCTTTGTTGCTCACTGCCATAGTGTTATGCAATTACAGGTTACTTTGCTGTGGATTCCGACTCGACGGCTGAGGAACTTGTGTTCAACAGAACCGTTACTCTACGGGATTCCTATGGAAAAGCTGGACCCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018678

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018678&oldid=47434"