BGIOSGA018709

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Revision as of 02:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018709| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018709, complete gene.| tag = BOR4| ...")
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Gene Name

BGIOSGA018709

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018709, complete gene.

LocusTag

BOR4

Ensembl Transcript ID

BGIOSGA018709-TA

Ensembl Protein ID

BGIOSGA018709-PA

Length

4394

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4806157..4810550

Sequence Coding Region

4810447..4810550,4810281..4810363),complement(4809819..4810011,4809584..4809722),complement(4809330..4809495
,4809083..4809249),complement(4808812..4808985,4808509..4808622),complement(4808296..4808412
,4807629..4807951),complement(4806874..4807141,4806157..4806330

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4806157..4810550 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4806157..4810550 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAACTGTGAAAGCCCCATTTGAGGGAGTGGTTAATGATTTCAAAGGAAGATTATCTTGCTACAAACAAGATTGGATAGATGGGTTCCGTACTGGATTCAGGATATTGGCACCTACATTGTATATCTTCTTTGCATCTGCACTACCTGTTGTTGCCTTTGGGGAACAATTGAGTAATGATACAGATGGTGCACTGACCACAGTTGAGACATTAGCATCAACCGCTATATGCGGCATCATACATTCAATATTGGGCGGGCAACCACTGTTGATTGTAGGAGTTGCGGAGCCAACTATAATCATGTACACTTATATCTACAATTTTGCCAAAAATCACCCAAACCTCGGAGAAAGACTATTTCTGGCATGGGCTGGATGGGTTTGCATCTGGACTGCCTTCATGCTATTCCTCATGGCAATGTTTAATGCTGCAGTCGTTATAAACAGATTTACAAGGTTTGCTGGAGAACTATTTGGAATGTTGATTACGATTTTGTTCATGCAGGAAGCAGTCAAGGGGATGTTGGGTGAATTCAGTGTGCCCGAGGGTAAAGACCACAGTCTACCGATATACCAATTCCAATGGGCTTATGTTAATGGTCTGCTTGGAATTATCTTTTCAATGGGCCTGCTATACACAGCAATACGTAGCAGGAGTGCAAGATCATCGCTATACGGCACTGGGTGGCAAAGAAGCTTCATTGCTGACTATGGCGTTCCACTCATGGTTGTAGTCTGGACAGCTTTGTCGTATTCATTGCCAAGCAAGATCCCTTCAGGGGTTCCTAGGAGGCTCTTCACCCCACTTCCTTGGGAACCAAAGTCATTGCAGCATTGGACAGTAGCAAAGGATTTGTTTTCTGTCCCTCCACCATACATATTTTTGGCTATTGTGCCTGCTGTAATGGTTGCCGGGCTCTATTTCTTTGATCATAGTGTAGCTTCACAACTGGCTCAGCAGAAGGAGTTGAATTTGAAAAACCCATCGGCTTACCATTATGACATTTTGGTCCTCAGCTTTATGGATACAAATGCCCTGCAGGTCTTGATTTGTGGTCTTATTGGCATCCCTCCATCTAATGGAGTACTTCCCCAGTCCCCCATGCACACTAGAAGCCTTGCCGTCCTCAAGGGGCAGTTGCTTCGCAAAAAGATGGTCCAAACTGCCAAGGAGGGTATGATGAACAATGCTAGCAGTTCAGAAGTTTATGGAAAGATGCAAGAAGTTTTTATCAAAATGGATGATAAATCCAATGCCAAATCTGTACGCAAAGAGCTGAAGGAATTGAAGGATGCAGTTATTCCAGAGGGAAATGGAGCAGGGAGGGTGTCTGAGGTATTTGATCCTGAAAAGCATATAGAAGCTTACTTGCCTGTCCGGGTGAATGAGCAGAGAGTGAGCAATCTGTTGCAGTCCCTGTTGATCGCTGGTTGTGTTGGAGTCATGCCAATCATTCAGAAGATACCAACATCAGTCCTTTGGGGTTACTTTGCTTATATGTCCATTGACAGCGTTCCGGGAAACCAGTTCTGGGAGAGGACACAACTTCTGTTCATTTCACCTCAACGGCGCTACAAGCTTCTGGAAGGCGCTCATGCATCCTTCATGGAGTCAGTACCTATCAAGAAAATATCTGCCTTCACTATTTTCCAGCTGGTTTATCTCTTGATCGTCTGGGGGATGACATGGATACCAGTAGCTGGAATCCTCTTCCCACTGCTGTTCTTCTTTCTCATTGTCATTAGACAGTATATCCTCCCGAAATTCTTCGATCCACGCCACCTGTGGGAATTGGATGCCGCTGAGTACGAAGAACTTGAGGGAGTGCGGCGTGATCCGTCTACGGACGAAGATGCTTCCGTTTCGCGCTGCAGCGATGCCAGCCCTGAATATGCTTCTGAGATATTGGATGAATTCACGACTAATCGTGGTGAACTGAAGCACAGGACCAAGAGTTTCCGTGACGAGAGGCTGATACAGGTACCGACTCATATCCAGCGATGGGGTTATTTCCCCTAA</cdnaseq>

Protein Sequence

<aaseq>MGTVKAPFEGVVNDFKGRLSCYKQDWIDGFRTGFRILAPTLYIFFASALPVVAFGEQLSNDTDGALTTVETLASTAICGIIHSILGGQPLLIVGVAEPTIIMYTYIYNFAKNHPNLGERLFLAWAGWVCIWTAFMLFLMAMFNAAVVINRFTRFAGELFGMLITILFMQEAVKGMLGEFSVPEGKDHSLPIYQFQWAYVNGLLGIIFSMGLLYTAIRSRSARSSLYGTGWQRSFIADYGVPLMVVVWTALSYSLPSKIPSGVPRRLFTPLPWEPKSLQHWTVAKDLFSVPPPYIFLAIVPAVMVAGLYFFDHSVASQLAQQKELNLKNPSAYHYDILVLSFMDTNALQVLICGLIGIPPSNGVLPQSPMHTRSLAVLKGQLLRKKMVQTAKEGMMNNASSSEVYGKMQEVFIKMDDKSNAKSVRKELKELKDAVIPEGNGAGRVSEVFDPEKHIEAYLPVRVNEQRVSNLLQSLLIAGCVGVMPIIQKIPTSVLWGYFAYMSIDSVPGNQFWERTQLLFISPQRRYKLLEGAHASFMESVPIKKISAFTIFQLVYLLIVWGMTWIPVAGILFPLLFFFLIVIRQYILPKFFDPRHLWELDAAEYEELEGVRRDPSTDEDASVSRCSDASPEYASEILDEFTTNRGELKHRTKSFRDERLIQVPTHIQRWGYFP</aaseq>

Gene Sequence

<dnaseqindica>1..104#188..270#540..732#829..967#1056..1221#1302..1468#1566..1739#1929..2042#2139..2255#2600..2922#3410..3677#4221..4394#ATGGGAACTGTGAAAGCCCCATTTGAGGGAGTGGTTAATGATTTCAAAGGAAGATTATCTTGCTACAAACAAGATTGGATAGATGGGTTCCGTACTGGATTCAGGTTTGTGTAATCGAACATTTCCAATGTTAATTTTTGCATGTTTGTTCTTAATTCTGGCTGCTGTATTGATTATGTTATTTCAGGATATTGGCACCTACATTGTATATCTTCTTTGCATCTGCACTACCTGTTGTTGCCTTTGGGGAACAATTGAGTAATGATACAGGTTGGATTGTCTTCCTTGTACTTACATCAGCTCTGAGCTTCGCCATTCCTAGTTATTGACACGATGTTCTACATACTTTAGCTCTCCGTAATATTTGAGTTGGAAAAAGGGAAACAAGTTATTAACTCTTCTTTCAAAACGGGGGGACAATAGAAAGTAATAACAGTTTCCTTTCTCTATTGGTCGGAGTCAAGGAACAATCAAACGGATAACTGTGGCTCCTTCAGAGTTTATACGCAGTTTCTGACATCTGAATTGTTCATGTTCAGATGGTGCACTGACCACAGTTGAGACATTAGCATCAACCGCTATATGCGGCATCATACATTCAATATTGGGCGGGCAACCACTGTTGATTGTAGGAGTTGCGGAGCCAACTATAATCATGTACACTTATATCTACAATTTTGCCAAAAATCACCCAAACCTCGGAGAAAGACTATTTCTGGCATGGGCTGGATGGTAAGGGCTGATAAATATAACAATCCTTCCTTCAGTTTTCTTTTTGGTTATACTAAATGTTATCTAAATTTCTCACTTTTCTTTGGCCACTGATAGGGTTTGCATCTGGACTGCCTTCATGCTATTCCTCATGGCAATGTTTAATGCTGCAGTCGTTATAAACAGATTTACAAGGTTTGCTGGAGAACTATTTGGAATGTTGATTACGATTTTGTTCATGCAGGAAGCAGTCAAGGTATTCGTCATTTGTTTTCTTACCGTTAATAACATATAAAGTGTGCTCTAATTTAGTTTACTGTTACTACATGGTCTTTGTTCTGCAGGGGATGTTGGGTGAATTCAGTGTGCCCGAGGGTAAAGACCACAGTCTACCGATATACCAATTCCAATGGGCTTATGTTAATGGTCTGCTTGGAATTATCTTTTCAATGGGCCTGCTATACACAGCAATACGTAGCAGGAGTGCAAGATCATCGCTATACGGCACTGGTTTGTCATAAGTACCTTCATTTTTTTTTTATCTCAGTCTCCAAATATCAACTACTCATACGCCAGCTAATAACCTGCAGGGTGGCAAAGAAGCTTCATTGCTGACTATGGCGTTCCACTCATGGTTGTAGTCTGGACAGCTTTGTCGTATTCATTGCCAAGCAAGATCCCTTCAGGGGTTCCTAGGAGGCTCTTCACCCCACTTCCTTGGGAACCAAAGTCATTGCAGCATTGGACAGTAGCAAAGGTTGTGATGCAGTTTATTTTGATTCCAGGATCTAATGTAAAATGTAGATATATTCGATGTTGGAATTTTGATGTGCTTTTCGCTATTGATTTTGCAGGATTTGTTTTCTGTCCCTCCACCATACATATTTTTGGCTATTGTGCCTGCTGTAATGGTTGCCGGGCTCTATTTCTTTGATCATAGTGTAGCTTCACAACTGGCTCAGCAGAAGGAGTTGAATTTGAAAAACCCATCGGCTTACCATTATGACATTTTGGTCCTCAGCTTTATGGTATGATTTGCCATTTGTAGTTGCCTCTGTAGCATACATTTTCTTATTTTGCAGTAAGGATGCAATCCTTTGATTCCTACTGCTTATGGGAACACAAAAATATAAAATAATTGGTGATAGGTGGAAGTTGTTGAGACATGTATACACGATCTTACAACTTTGCTATAGAAATGGCTCTTTTCTCAATAGGATACAAATGCCCTGCAGGTCTTGATTTGTGGTCTTATTGGCATCCCTCCATCTAATGGAGTACTTCCCCAGTCCCCCATGCACACTAGAAGCCTTGCCGTCCTCAAGGGGCAGGTTAGTGATTTTGACGTGTTTATACTCCTTACGTATTTCTGTTTATGCTATTCAGTTTGCCTTTGCTCAAGTGCTATCTCTATTTCTTTTGATTAGTTGCTTCGCAAAAAGATGGTCCAAACTGCCAAGGAGGGTATGATGAACAATGCTAGCAGTTCAGAAGTTTATGGAAAGATGCAAGAAGTTTTTATCAAAATGGATGATAAATCCAATGTGAGTATAAAGTATACAGTATACACCAGAATATATTCATTCCTCAGTACAATACTAATTATACTGTTGCTTCATACTGCTTGATTAATCATATCCGCTTCGTTTTTTCAAAGAGGGCCTTTTCCCCTTGTGAACATTTTAATTAGTAACTACCAGCGTCATCAGTGAGATTATTGTCCTAATAAAATAGTATCTCTGTTAGATTTTATTAAGTTATTCGAAGAAACAATATAATCATTCATTCCGTTCTGTCTGCAAGACAAAATAAATGCACCACTTAGCCCCATGCAGTAAAAATCTCTGTTAATATTTTCCTAAAAAAAATCTCTGTTAATACCCTGCAGGCCAAATCTGTACGCAAAGAGCTGAAGGAATTGAAGGATGCAGTTATTCCAGAGGGAAATGGAGCAGGGAGGGTGTCTGAGGTATTTGATCCTGAAAAGCATATAGAAGCTTACTTGCCTGTCCGGGTGAATGAGCAGAGAGTGAGCAATCTGTTGCAGTCCCTGTTGATCGCTGGTTGTGTTGGAGTCATGCCAATCATTCAGAAGATACCAACATCAGTCCTTTGGGGTTACTTTGCTTATATGTCCATTGACAGCGTTCCGGGAAACCAGTTCTGGGAGAGGACACAACTTCTGTTCATTTCACCTCAACGGCGCTACAAGTAAGCCCTCATCTAGCTGCGTTCTGTATCTATTCAGACGAGCCCTTTTAAAAACTTTAGGGCATGTTTAGATTGTAGCCAAAATAAATCTTACCGAATGCCAAAATTTTAGCAAGATGTTAATATTGTCAAAATATTGGTAGGATTTCTTATGTATTTACTAAATTTGGCGACAAACTAAACATAGCCAAAATTTTGACAACTTTAAAATAGTATGGTTGAAAATGGCATCAAAGTAAACAGGCCCTTAAAGATACGAGGGGCCGTGTTACTATAACTTGGGAGATACCAAATACTGTCAAAATGTATTATTTAATGGTGCCTCTAAAACCTCCCAAGGATCGTAGAACTTGTCTATTCATTTCTTGTCAGCATGCTATGCGTGTTTAGTTCTTGCTATGTGTGTTTAGTTCTTGCTAAGCCAGTTTTGAGTGCAGGAACATAAGTTTCAGTACTAATTATTATTTGTTCTTGATAAATTGGACAGGCTTCTGGAAGGCGCTCATGCATCCTTCATGGAGTCAGTACCTATCAAGAAAATATCTGCCTTCACTATTTTCCAGCTGGTTTATCTCTTGATCGTCTGGGGGATGACATGGATACCAGTAGCTGGAATCCTCTTCCCACTGCTGTTCTTCTTTCTCATTGTCATTAGACAGTATATCCTCCCGAAATTCTTCGATCCACGCCACCTGTGGGAATTGGATGCCGCTGAGTACGAAGAACTTGAGGGAGTGCGGCGTGATCCGTCTACGGTATGAATTCTTTGTCCTCTTTCTTTTTTTTTCTTTTTGCACATTATTTTTCCCACATATATTTGACTGCGGAGCACTTAAACTCTAGTAGCTCATATATTTGACTGAAATTTAAAATCCTTTTTGGTCTGCTAGGTTCTTTTCACGTCTTTCTAATACATACCATTCCTTTTTTTTTGACCAAATCGAGTATTATGGTTTAATGCAGTCAAAATATTAAATTACTCGAACAGTATAGCCTTATGCATATGTGTGGTTTGGCAATTTTCCTACATCTGTGACTGAATTTAGAATGCCTTTTGGTCTGCTAGGTTCTTTGCACGTCTTTCTAATACATAGCCTTTTTTTTTTCTTTTGGACCATATTGAGTATTTTAGTTTAATGCAACCAAAATGTTAAATTATTGGAATATACGAACAGTATAGCCTTACGCATGTGTAGTTTGGCAATTTTCCTACCTCTAGTGGGCTTTAGCTATCACTCTTAAAGTCATAACTGCTTTCTAAGATGATCTGAATCTTCTGGCTTTGGCTCTTTACACAGGACGAAGATGCTTCCGTTTCGCGCTGCAGCGATGCCAGCCCTGAATATGCTTCTGAGATATTGGATGAATTCACGACTAATCGTGGTGAACTGAAGCACAGGACCAAGAGTTTCCGTGACGAGAGGCTGATACAGGTACCGACTCATATCCAGCGATGGGGTTATTTCCCCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018709

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018709&oldid=47465"