BGIOSGA018720

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Revision as of 02:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018720| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018720, complete gene.| tag = OsI_186...")
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Gene Name

BGIOSGA018720

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018720, complete gene.

LocusTag

OsI_18639

Ensembl Transcript ID

BGIOSGA018720-TA

Ensembl Protein ID

BGIOSGA018720-PA

Length

2298

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4463627..4465924

Sequence Coding Region

4465816..4465924,4465619..4465699),complement(4465319..4465536,4464674..4464897),complement(4463627..4464314

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4463627..4465924 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4463627..4465924 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAAGACATTGAAATCCGGTTTATGCGTGCTGCAGAAGCTGGGAATGAGGTTTCCAGAATGCTTGAGACAAAGAAGATCAGACTTGATATATGTGCTAAGATTCCAGGTTCTCCAGGCAAGCCACCTACTGCCCGATTTGTGTCAGCACTTCGAGTCTGCTTCAATCGTGAGAATATTCTCAACCAGGAAACTGCACAGCATGTTTCAAAAGTTGTCACTTGGAAGCGTTCTGTATCATCTTTGTCCTCATCATCTAAGAGTCCACTTACAGCAGCAATGATTACCGATGATGTGGGTGATAGTAACAGTGATTTTGTTGAGCAATTTGCCATGGTATCTGGAAGCCACTCGTCTACCTTGGATAGGCTACATGCATGGGAGAGAAAACTACATGATGAAATCAAGGCTAGTGAACATGTTAGAAAGACTTATGATGAGAAATGTAACCTTCTCCGGCACCAATTTGCACGAGGTCTAAATGCTCAACTGATTGATAAGACCAGAGCTATTGTGAAGGATCTTCATTCCAGGGTGTCTGTTGCGATCCAGGCTGTCGATGCAATATCAAAAAGAATAGAGAAGATAAGGGATGAAGAACTGCAGCCACAACTTGTCGAGCTGATTCAAGGGTTAATAAGAATGTGGAAAACAATGTTGGAATGCCACCACAAACAATTCATCATAATATCACTGGCATACCATGTCAAGAGTGTGACCACGGTGCAGCAAGGTGAGCACCACCACAGGGCCGCAACGCATCTCTGGAACGAGTTGGACTGCTTTTCGTCCAGCTTCAAGATCTGGGTCACTGCTCACAAGTCCTACGTCGAGTCCCTCAACGCTTGGCTCCAGAAGTGTGTCCTGCAGCCAGCCCAGGACCGATGGAGGCGCAAGCGCAAGGTCTCTTTCCCTCCCCGCCACGCGCTCTCCCCTCCGATCTTCGTTCTCTGCAGAGACTGGCTCACCATGATGGAGTCACAGTCACTCCCCACAGATGAGCTCTGCAAGTCTATCAAAGAGGTGGTGCAGCTCCTGCGCGGTTCGTTCGACCACCAGGCTGATCATCAGAACAAAATGACGACTGAATCGCACTTGAGAAACGAGTCGCAGGAATGTGGGATGCTGGAGAATAACGAGCAGGAGGTGAGTGGAAGCGTAGAAGCAGTGGAAGGGTTGCAGTCAAAGCTGACTACGGTTCTGGATCGCCTGACAAAGTTCTCAGAGGCTTCACTGAAGCATTACGAGGAGCTCAAGCAGAATTATGAGATGTCTCGTGATGACTACAAGATGGGTCGATCAAATGCACATCTTGTTTAG</cdnaseq>

Protein Sequence

<aaseq>MKDIEIRFMRAAEAGNEVSRMLETKKIRLDICAKIPGSPGKPPTARFVSALRVCFNRENILNQETAQHVSKVVTWKRSVSSLSSSSKSPLTAAMITDDVGDSNSDFVEQFAMVSGSHSSTLDRLHAWERKLHDEIKASEHVRKTYDEKCNLLRHQFARGLNAQLIDKTRAIVKDLHSRVSVAIQAVDAISKRIEKIRDEELQPQLVELIQGLIRMWKTMLECHHKQFIIISLAYHVKSVTTVQQGEHHHRAATHLWNELDCFSSSFKIWVTAHKSYVESLNAWLQKCVLQPAQDRWRRKRKVSFPPRHALSPPIFVLCRDWLTMMESQSLPTDELCKSIKEVVQLLRGSFDHQADHQNKMTTESHLRNESQECGMLENNEQEVSGSVEAVEGLQSKLTTVLDRLTKFSEASLKHYEELKQNYEMSRDDYKMGRSNAHLV</aaseq>

Gene Sequence

<dnaseqindica>1..109#226..306#389..606#1028..1251#1611..2298#ATGAAAGACATTGAAATCCGGTTTATGCGTGCTGCAGAAGCTGGGAATGAGGTTTCCAGAATGCTTGAGACAAAGAAGATCAGACTTGATATATGTGCTAAGATTCCAGGTGAAAATCATGTGGGGGAATCATTATCTTGTCTTTCCCCCCCCCCCCCCCCCCCCGCACCGTGTGGGCATGGTTTGATGGAACTTCATTTCTTTGTTTTATTCCTCAAATTCCAGGTTCTCCAGGCAAGCCACCTACTGCCCGATTTGTGTCAGCACTTCGAGTCTGCTTCAATCGTGAGAATATTCTCAACCAGGGTAAGTAGGATGCTTTACTGATCTCTTCTCATATTTTTACCATAACATTTGTTTGAAGTACTAATTTTGAGGTTTTCTGTAGAAACTGCACAGCATGTTTCAAAAGTTGTCACTTGGAAGCGTTCTGTATCATCTTTGTCCTCATCATCTAAGAGTCCACTTACAGCAGCAATGATTACCGATGATGTGGGTGATAGTAACAGTGATTTTGTTGAGCAATTTGCCATGGTATCTGGAAGCCACTCGTCTACCTTGGATAGGCTACATGCATGGGAGAGAAAACTACATGATGAAATCAAGGTACATTTTCAGTACATGTGCACTTGTGCAGTGAAACTTCTTACTATTGCGTGCAAGTCTCTACTCCTGGCTGTTGATTGGGAATTCATCATTAGTGTCACTTGTCTACATAAGATTTTTGCTTTATTGTATACCTCAGTCCTCAAGTGAAATTTGGTCTATTTTATTCTTGCAGTTCTCAACATTTTGTATAAAAGATATCTCTTGCCAGTAGACTTGACAATACAAAAGCATATTTTGTACAGTTATTTGTATTGATAATACAATTTGATTTCTAATTTGCCAGCAGAATTAAAGTCTTGTACAATAACTAGCAAAAACAGTATGCAGGTGGAAAGTTATCAATATGAAATTTTGCCCTCTCTTTAGGACTGTTATTGGTATAATGGATCACTGATACTACACTATTTTGTTTCTGTAGGCTAGTGAACATGTTAGAAAGACTTATGATGAGAAATGTAACCTTCTCCGGCACCAATTTGCACGAGGTCTAAATGCTCAACTGATTGATAAGACCAGAGCTATTGTGAAGGATCTTCATTCCAGGGTGTCTGTTGCGATCCAGGCTGTCGATGCAATATCAAAAAGAATAGAGAAGATAAGGGATGAAGAACTGCAGCCACAACTTGTCGAGCTGATTCAAGGGTATAAACTTAAACATCACCTAGTGGCCATCTTTTAGCTATACAATAACTTAGTCTTGCATATTTTATCAGAATTGTTATACAGTGCATTTGTTGAAGTTCGATATTTCCTTTTTAGTGCGTTTGATGGGAACATTTGAACTGTCAACATTACTCATAATTTAAGTTTGGTGCTAGAACACTGAAAATAAGAATATAATGATTCACTATCTTTCAAGAACCATGTTTTGTTGGACAATTTGAAGTCTCACATTTCTAACTTAATCTGTAGTGAAAAATCAACTTGGATTATATTGACTTTAAAGTTCAATGCATTTCTTGCATGTTAAACCTTGAACTGACCGCACATAACTCATGCAGGTTAATAAGAATGTGGAAAACAATGTTGGAATGCCACCACAAACAATTCATCATAATATCACTGGCATACCATGTCAAGAGTGTGACCACGGTGCAGCAAGGTGAGCACCACCACAGGGCCGCAACGCATCTCTGGAACGAGTTGGACTGCTTTTCGTCCAGCTTCAAGATCTGGGTCACTGCTCACAAGTCCTACGTCGAGTCCCTCAACGCTTGGCTCCAGAAGTGTGTCCTGCAGCCAGCCCAGGACCGATGGAGGCGCAAGCGCAAGGTCTCTTTCCCTCCCCGCCACGCGCTCTCCCCTCCGATCTTCGTTCTCTGCAGAGACTGGCTCACCATGATGGAGTCACAGTCACTCCCCACAGATGAGCTCTGCAAGTCTATCAAAGAGGTGGTGCAGCTCCTGCGCGGTTCGTTCGACCACCAGGCTGATCATCAGAACAAAATGACGACTGAATCGCACTTGAGAAACGAGTCGCAGGAATGTGGGATGCTGGAGAATAACGAGCAGGAGGTGAGTGGAAGCGTAGAAGCAGTGGAAGGGTTGCAGTCAAAGCTGACTACGGTTCTGGATCGCCTGACAAAGTTCTCAGAGGCTTCACTGAAGCATTACGAGGAGCTCAAGCAGAATTATGAGATGTCTCGTGATGACTACAAGATGGGTCGATCAAATGCACATCTTGTTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018720