BGIOSGA018738

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Revision as of 02:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018738| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018738, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018738

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018738, complete gene.

LocusTag

OSJNBA0086E02.13

Ensembl Transcript ID

BGIOSGA018738-TA

Ensembl Protein ID

BGIOSGA018738-PA

Length

3720

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4216156..4219875

Sequence Coding Region

4219774..4219875,4219589..4219681),complement(4218854..4218922,4218645..4218749),complement(4217844..4217898
,4217406..4217479),complement(4217085..4217168,4216858..4216998),complement(4216672..4216737
,4216477..4216586),complement(4216156..4216324

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4216156..4219875 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4216156..4219875 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGTCGTGTAGCTTCCGCACCGCCGCCTCGCCATCGCCATTCCCCTCGCTTCCCTCCTCCTCCCGACAAGCGCCACTATGCTCCAGCCTCCGATTCCCCAGACCAAGAAACGGGAGGATGGTGGGGGTGCGGAGGAGGGCGTCCGGATTCGAGGCCTTCCCTCCCCTACCTGGTAAGGTGTTCGTCGAGGAGGCAATTGGAGCTGAATATGGGGAAGGTTTTGAGACATTTAGGATGGATGGACCACTCAAGGTCGATGTGGATTATCTGAACGAAAAATTGCAAGAATGCTTCCTTCAAAGGATAAGACATGCTATGAAGCCAGATGAAGCATGTGGGCTTATTTTCTCATGGGACAACGTAATTGCTGATACAGACTCACTAAAGTTGGATGCCTGGAGACAGCTTGCTTTGGAAGAAGGGAAGGATATCCCAAATGCTGGTCATCTCCAAAAGAGTATTCTTCATGGTGCTGCTGACCATGTGCTTAGAAAGGTTTTATATTGGGCAAAAGATGAAAGTCAAATGGAAAGACTGAAGGCACGGCTTATAGAGTTATACTACGAAAATCTCTTCAAACTTGATACACCAGTAAATGGATTGCGGGAATGGTTGGATGCTGTCCAGACAGCAGGCATCCCTTGTGCTGTCGCATCGTCCCTGGATAGGAGATGCATGATTGAAGCTTTGGATCGAATGGAACTAAGCAAATATTTCAAGGCAATTGTGACTGACGAGGATGATATGGAGTCAATAGCACATAGGTTCCTCTCAGCTGCTATGAAGTTGGATCGGAAGCCCTCAAAGTGTGTAGTGTTTGAGGATGACCCGAGAGGTGTAACCGCTGCTCACAACTGTACCATGATGGCAGTTGCACTCATTGGTGCTCATCCTGCGTATGAGCTGGTACAGGCGGATCTCGCCATCGCAAAATACAGCGAGCTCTCGGTGATCAATCTCAGAAGGTTGTTTGCTCATAAGGGGTTAAGTTTCATGGACTTGCAGAAGCAGATCATCGAGAGGTCACCTCCAAAGAGGAAGCTGACAGTAGACACCATCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MESCSFRTAASPSPFPSLPSSSRQAPLCSSLRFPRPRNGRMVGVRRRASGFEAFPPLPGKVFVEEAIGAEYGEGFETFRMDGPLKVDVDYLNEKLQECFLQRIRHAMKPDEACGLIFSWDNVIADTDSLKLDAWRQLALEEGKDIPNAGHLQKSILHGAADHVLRKVLYWAKDESQMERLKARLIELYYENLFKLDTPVNGLREWLDAVQTAGIPCAVASSLDRRCMIEALDRMELSKYFKAIVTDEDDMESIAHRFLSAAMKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAHPAYELVQADLAIAKYSELSVINLRRLFAHKGLSFMDLQKQIIERSPPKRKLTVDTIF</aaseq>

Gene Sequence

<dnaseqindica>1..102#195..287#954..1022#1127..1231#1978..2032#2397..2470#2708..2791#2878..3018#3139..3204#3290..3399#3552..3720#ATGGAGTCGTGTAGCTTCCGCACCGCCGCCTCGCCATCGCCATTCCCCTCGCTTCCCTCCTCCTCCCGACAAGCGCCACTATGCTCCAGCCTCCGATTCCCCGTAAGAAGTTCCCTCCTTTTACGGCGGGTTTATGGAAACTTTTGGGGTTTTTTTTTCTGATGTTTTTGTGATTTTTTCTTTGGTTGTTGCAGAGACCAAGAAACGGGAGGATGGTGGGGGTGCGGAGGAGGGCGTCCGGATTCGAGGCCTTCCCTCCCCTACCTGGTAAGGTGTTCGTCGAGGAGGTGAGCTTTTCTTGCTTTTTGTTTGATTCATGGGTGTAAAGATAAGAGTTTTCTTGGTTAATTTCTTGTTTGGTTTCAAGAACTCTGGCTTGCCCTAGGTGCAAATGTGGTATTAACTTCGATTGGGGTTGGATTTTCTCTGTGTGACCTCCGGATTAGGCAGGGATTCAGCTTGCTCTGATGCTTCTTTAGAATACAAACTGCGCATCTTTGGGAGAAATTAGTGCCATTTATATGGTTCATGGGTTAATTTCCATCTTTTCTTATCTTGGTTGTACTAATAGGGTAGAAAGTTAGCTCATGCTTCTTCCATTTCGGAGCATTGGCGAGTTTCCTCTAAAACAGAGCAAGTGACTAAGTGAGTTTCATTTGAGTTTGATGGTTCCCTTTGGTGAATTATCCCCAGTATTGCTGTTCTTGTAGTTGGTGGGTTCGATGATGTAGTACTCTTAGCTAAGGAGTAGATTTTTAGTTCTGTTGCTTGGAATCTTGGTAGTCAGTTAATTACCATATTCATATACTTGGATCACTTATGACTAACATTTCTCAACGTTCCCAAGCTATGGTTTATATTGTTCCATTACATGATACACTCTTCGAGGATAAGAGCTGTTTACCTTTCATTTTTGTAGGCCAGGACTAATTAGATGTGCATTTGTTTTTTAGGCAATTGGAGCTGAATATGGGGAAGGTTTTGAGACATTTAGGATGGATGGACCACTCAAGGTCGATGTGGTGAGTATACGTCATTTAACTTACATCGCAATTTTTTCTATATCTAGCATCCTGTATTACTTCCTTAAGTTACATTTTGTATAAGTTTCCTTTCATTGTTTCAGGATTATCTGAACGAAAAATTGCAAGAATGCTTCCTTCAAAGGATAAGACATGCTATGAAGCCAGATGAAGCATGTGGGCTTATTTTCTCATGGGACAACGTAATTGTGAGTTTTTCTTTTTTGTTCTTGTGCTAGTTTGTAATAGTGCAATGTCTACTAGCCTACTAGTGATATTTATTTCTTCTAAGTGGCACATTAGGCCTTCTCATCTGCAGTTACTCGTTGTGATGATCATTCAAACAAACTCTACCTTACGTGTTAATAATTTAAAATTTGTTTCTGTTTCAACTTCATTACGGGATGCTTTGTTTTTTTGGTTTGAACTACACTGGTTGATTGGTAGAGAAGAACAAGAGTCAGCTTCCTTAAGTCCATTCTTCTCAGTAGTTTATAGAGCTGTTACAATGGGGAAACACTTTTAATCACCTAGGTGGACATCCACCCATTTGTTGCATGTCAACTAAATGGGTATGAAAAAAAATAAAAAAAATTTGACAAGATATATTCATATGTAATATATCACCCCACAAACATGCAAGTTCAAATTCGACTTCTACAAGTTGTAATAAAAATAACAAATCAAACTCTGATTAGTATACGTATATTCACAGTTAATTTTGTTATTTTTGTTTCAACTTATAAAAGTTGAATTTTAAGTTGCATGTTTGTGTAGTGATATATTTTATATCAATCTATCTTGTAAATTTTTTTGAAATTTTTTCATGATCATTTAGTTGACATGCACTAAATGAGTGGACGTCCACTCAAGTGATTAGAATCCACCTCCGTTACAATGCCCATTGTTGCATCTATAATTGACTCAGATTTGTCATCCTCTTCTGTTCTCTTAGGCTGATACAGACTCACTAAAGTTGGATGCCTGGAGACAGCTTGCTTTGGAAGAAGGTATACCTTTAAAATAAAAATACAGTGTAAAGTTTTATGAAACATACTATTCCTATAATGTTATTGTATGGGTCCTTTTCTTTTTTCCGACAATGCAAACTGTAGAAATCATTTTCTTACTCGTTTAAGTTCATATTTTGTCTTCACATTCAGATTCTCAGTGGTATATTGTCTGCAAGGTCTGAGGAGCACATACATTAACTTACTATAAATATAAGATTCTTATTGTGCAACCTTTTATGACTTCTCATTCAATTTTGACTGAATAAAATCGGTCTAAACTACTTATTTGTCATTGAGGTTTGTGTTTACCTCACTGCCAGGGATGCTACCTTGATATTGCTAATAAATTTATTTCATGCAGGGAAGGATATCCCAAATGCTGGTCATCTCCAAAAGAGTATTCTTCATGGTGCTGCTGACCATGTGCTTAGAAAGGTATGAGTTTTCTTTATACATACGGAAGGTCTATGTTTTAGAGTTGATACCATGCTTGCATCATCAATTAGCTTTGGTACTTTTTAGTAACACTAATTTGCCACTGAAAGTTATTTTGCTGCAAACAAAATAATAATAATAAAAGCATACTCTTTGTTGGGCACATTCTTTCTATTGTGCATATGGCTTTCCTTTTGCAATTTGCACCCAGTGGCAACTCTACCTGTCCTTATTCAGGTTTTATATTGGGCAAAAGATGAAAGTCAAATGGAAAGACTGAAGGCACGGCTTATAGAGTTATACTACGAAAATCTCTTCAAAGTAATTATTTCTACGCTTCTTTTGGGATAAAAGATGGCTTAAATTATACATAATTGTTTCTGATTAAGTGTGTTCATTTCATTCAGCTTGATACACCAGTAAATGGATTGCGGGAATGGTTGGATGCTGTCCAGACAGCAGGCATCCCTTGTGCTGTCGCATCGTCCCTGGATAGGAGATGCATGATTGAAGCTTTGGATCGAATGGAACTAAGCAAATATTTCAAGGTTCTTTTTTTATATCATCCTAATTCCCAACTTTTACCAAAACATTATTTTCTGAAATACATTCTTCGAATACGATGTATATCAGAAGTTAATTTTATTCATTCCTCCTTTATATTGCAGGCAATTGTGACTGACGAGGATGATATGGAGTCAATAGCACATAGGTTCCTCTCAGCTGCTATGAAGGCATGTTTCTGCTCCACTTCAAAATATTTAGCTGTTTTCAAGATATATCGCTCACATGTTTGTCAAATCTGTTGTTTCTCACCAGTTGGATCGGAAGCCCTCAAAGTGTGTAGTGTTTGAGGATGACCCGAGAGGTGTAACCGCTGCTCACAACTGTACCATGATGGCAGTTGCACTCATTGGTGCTCATCCTGCGTATGTAGTTCTCTCTTTTTTTTTCTTTTTTTGGAATAATATTCTTTGAAATTAGAGCACAGTTTTTTCCGTTGCTTTCAGATCTTTCTGTTGAACTACATAGCAAATCTTGGCTACTTACCTGTGGAATATACATTTTGTATGACATGTAGGTATGAGCTGGTACAGGCGGATCTCGCCATCGCAAAATACAGCGAGCTCTCGGTGATCAATCTCAGAAGGTTGTTTGCTCATAAGGGGTTAAGTTTCATGGACTTGCAGAAGCAGATCATCGAGAGGTCACCTCCAAAGAGGAAGCTGACAGTAGACACCATCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018738

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018738&oldid=47494"