BGIOSGA018748

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018748| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018748, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018748

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018748, complete gene.

LocusTag

OSJNBA0027N19.10

Ensembl Transcript ID

BGIOSGA018748-TA

Ensembl Protein ID

BGIOSGA018748-PA

Length

5780

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:4002939..4008718

Sequence Coding Region

4008600..4008718,4007693..4007856),complement(4007289..4007470,4005405..4007183),complement(4005213..4005269
,4004425..4004770),complement(4004141..4004340,4003723..4003794),complement(4003590..4003666
,4003410..4003511),complement(4003116..4003302,4002939..4003028

Genome Context

<gbrowseImage1> name=IndicaChromosome05:4002939..4008718 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:4002939..4008718 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTTTACTTCGTTTGTAGCAGTTTGGTTTGCCGAGATTTTTGGGGGGATCGACGTGTTCGACGACTGGGTGTGTGTGGGTGTGGGTTTTGTTTGGGTTGAAGGGTTTTTGCCGTTTTGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCTTCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGTATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCAAGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGCTATCCCTGACCAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGACCAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACACAGTTCAATGTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCTTGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGACTTAATCAAGAAGACTGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGGTAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCTGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAATATATGCTATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTGATAGCAGGAAAGGGTCATTGAGTTTTTTCTTTTTCTTTTCTAATGTTGGTGGTTATCAAAAGACTGGTCGACGATTTGCTCTTGGTGCGGCAGAAATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCAGAAAGGTATGACCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGGGATAGAATGGTGTCTAGCGTAGAGATCTTTGACCCACGTCGCAACTCCTGGAGGGTGGGTGATTCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCGTTTAA</cdnaseq>

Protein Sequence

<aaseq>MFTSFVAVWFAEIFGGIDVFDDWVCVGVGFVWVEGFLPFWVLEEREANGLTMQGQHLNSQTVDLARNLRENQLGGVIFGCKHNTIEECFEKQLFGLPSVHYSYVRNVKPGLPLFLFNYSDRKLHGIFEAASPGQMCIDPYAWSHDGSLRTSFPAQVRICTKTRYPPLMESQFRTVLGDNYYNHHHFYFELDHAQTKALIAVFKSLAPANFTQVPAVSSKRTIAPLPSTKRQAPAIPDQKKGSASPKDINPFSVLSQSGGAVKDNWADSDVENGSISRSSDEKESRELVSDWEDLDDNVLHGQLGLCSNPDEISQNSSYNSVAKGAEFVECSHLVVNPVNGGIQSSDGDMLVISDDVHSGAVGVDGIESGGQNEPDDVSIQPERLSILQKLKELFVLRQQAVLSDQNLAYSNSDEYAPEETQANVSLSCPEQCAPEEPQANTTPSCPELHVLEETQANVSLLCPEQYVPEEPQANASLSCPEQHVPEEPQANASLSCPEQHVLEETQPNVSLPCPGQYVPEEPQANASLSCPEQHVPEEIQANASLPCPDQHVPEEPQDDASFSCPEQHVPEETQTNASLPCPDQHVPEETQDDASFSCPEQHVPEETQANASLPCPDQHVPDNASLPCPEQHVPEETQINAGLSCPDQHLPEETQFNVSLAYPDQHVPEETQVTAGISCPDQHVPEETQVNASLPSPNQHVPEETKATAAISCPDQHVTQANASLSQHEFGAKVEDNTSLEQNQGNAELIKIVLDLIKKTDSLDMRQNKSHEEILSLKEVVKDSGTKVKQLEYRIDELQFKLDSSLSLVGDACDTLDKPSIFLIGGYNGVSWLSSLDAFSPEKDILVPLAPLSSARSYASVATLEGCIFVCGGGVGDSFGNTVECYNTMCNEWMACPCLNNKKGSLAAVSLDGKIYAIGGGDGIVTYSDVEMFDPFLGKWICSPSMMNSDSRKGSLSFFFFFSNVGGYQKTGRRFALGAAEMNSVIYATGGFDGFSYLQSAERYDPREGFWARLPSMNVRRGCHTVAALGGVLYAIGGYNGDRMVSSVEIFDPRRNSWRVGDSMNFPRGYASTVTLGDNVFVIGGLQSSEKFMDSVEVYNVKCGWSVPGFSSIGVRCFASAAVV</aaseq>

Gene Sequence

<dnaseqindica>1..119#863..1026#1249..1430#1536..3314#3450..3506#3949..4294#4379..4578#4925..4996#5053..5129#5208..5309#5417..5603#5691..5780#ATGTTTACTTCGTTTGTAGCAGTTTGGTTTGCCGAGATTTTTGGGGGGATCGACGTGTTCGACGACTGGGTGTGTGTGGGTGTGGGTTTTGTTTGGGTTGAAGGGTTTTTGCCGTTTTGGTGGGTGGGTGTGGTTAGGGTTTTAGCTGGGTGGAGGTGGGTGATCTGTGCGTTGATCGCGATGGCTGGGGGGCACTGTTTCCTCACGGGGGTTTTTGTTTTGTTTCGGTTCGATCGCTTGGTTGTTACTCCCCGTGATTGTTTATGATCTGGTTGCTTCTGATTGGCTACATGCTGGTCTCGCGTTTTAAATTTTTTTTGGGGGAACTTTTGTGGTTTCCTTTAAATCGGAACAGAAGTTTCAAAATTTCGAGCTGGTTTTGCACGTTTTTTTTTTTTAAAAAAATTTCGGTTAGATCGTTGAGGTTATTACGCCCCGGGATTATTTATGATTTGGTTACTGTTGATTGGCTACATGGTGGGCTCATGTTTGCCCTTTTGTTTCGAGGGGGAAATTTTGTGGTTTTCCATTTAAATCGGAACCAAAGTTTGCAAAATTTCAAGTTGTTTCGGCACGGGATTTTGTTTCGGTTCGATCATTCGGTTGTTACGACCTGTAAATTTTTCTGGATTGGTTGCTTTTGGTTGGCTACGTGGGGAGTGGGGGTGCTCTTCTTTGTCTTTTTTTTTTTTTGCATTTAGATCGGAATTTTGTTTTTCAAAATATCAAGTTGTTTGCACGTTAGAGAGGGCATATGTTAACGATGATTGGAGCCACTGTACTTCAATTCTGTGATAGAGATATGAGTTGCATATACGAATGCTTCCCCAGTGTTTTTAATTTTATACCTTTGAATCTACAGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTTTGTCAAATCCACCTTTCACCTCTTGTTTTGAACACATCTGTCATTTCTCACATTTGTATAATTTGGTGATTGACAGCGTCATGTTTGTTTTGTATATGCATTACTATCCTTTACAATCATGGTGTAATTGTGGGGTTTGTGAAGTAAAGACTAGCTAAGCATTGAAACTTTGTTTGATTTCACATCTTAATCAGTTTCTGCATCTTGCTTGTTTTACAGGTCTGCCTTCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTATCACAAAATTATGAATGTCTAAATAACTGGCACAGTTTATTTGATCTGTAGTTAAGTTCCAGTTCATTTCTACTAATGAAAAATGGACATTTGTGTTTTAAGGTTCGTATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCAAGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGCTATCCCTGACCAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGACCAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACACAGTTCAATGTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCTTGAGCAAAATCAAGGAAATGCTGAGGTATGTGTCCCATTCCTTTCTGTTCGCCTGTTCCCTAGTCTTCATTATCTGATTACACTTGATAACCCAGTGACTCACATGATGCTTGTTGTTGTGCAGTATTCTCACATCATTTTTTTTTTCACTTGTCTACAGCTGATAAAAATCGTCCTTGACTTAATCAAGAAGACTGATTCATTGGATATGAGACAGGTCTGCCATTTGTTCCTGAGCACTTGTGATGTAAAAGTTGTTCGGAGGTTTATTTCATTGTTGGATAGAAACATACAAATGAGTGGTGCTGTGGGGCTTGACAGTATGTTCTCAATAGTTACAAGGAATCACAGATGTCCAATGTGGTTTCTTTTTACCAAATTTTCTAATTGTGGCTACTATTGATATTGGTTCAAGTAGCACATAAATTCCTTTGGTGTGAACATGAAGTTTTCTTTTAAGGGCCATTTAGCTTGTCTATACAATATTTTTCTTTCTTGCAGAACACAAACTGACCTGCACACCTGTAGTTGGCCATCTTACCTTTCTTTTTACTGCCAGATGCTGGATGTATTCACGATCAAAACTGTCTAGCTACCATTCTAGATGCAAATGCTGGATACTTAGGTTTTTTACTAATCATTGTTCTGTAATTTTCCAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGGTAACACAGGTATATCATGGTATTTTGAATGTGCTCTGTCAACTTCTTTTCTATTAGCTTCAAATTGCAGTTACTTACGCATTTTCTGTGTAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCTGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAATATATGCTATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTGTATGTTATCAGGCTCTTTTACTTGCTTCTAACGATTGTCTTGTTTCGAGTATTTTGCAACCTGCTTTGTAGTAAAACTTATACTCTACCCTAGTCAGCATCATGATTGCATTTTGATCATCTTTATGACCTTATAACGATAAGTTAGGACATGCATTTATTTTAGAACATGTAATTTTAGGACATGCATTTATTTTAGAACATGTAATTTAGTTTCAGCTTAATTTTGCCTCAAAAAATAATTTAGTTTCAGCATAACAGCATAGCTTTTCAGAAAAATTATGTACGACACTGCACTGCAACCTCCATTGCAGGCTGTAACATAGTTGTTGCTACATAATGGCAGGATAGCAGGAAAGGGTCATTGAGTTTTTTCTTTTTCTTTTCTAATGTTGGTGGTTATCAAAAGACTGGTCGAGTAAGATGAATTATCTTGACACTAATATATATTGTACATTCTGCTATATGTTACAGCGATTTGCTCTTGGTGCGGCAGAAATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAGTAAGATATTTTGTCAATTTTCCTCCATGTTTTTACATGATTTAGTTTCTTAGAAGATAACAAACATGCCACATACAGATCAGCAGAAAGGTATGACCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTGAGTAATTTCCTCGTGTACATTACGTGTTATTGAACAAGGAAGAAACGATTGCTGTCTTGCTTAAATCTTGTAAAGAAACTCATGTATTGGCTCTGACTTTTCAGGTATGCCATTGGAGGGTATAATGGGGATAGAATGGTGTCTAGCGTAGAGATCTTTGACCCACGTCGCAACTCCTGGAGGGTGGGTGATTCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTAAGTAGACCCATACCAACCATCTTTCTCCAAACTTCACAATTCCCAGCTCTCTTTTAAGGATAGTTTCTCTGCCCTTTGTTACAGGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCGTTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018748

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018748&oldid=47504"