BGIOSGA018750

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018750| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018750, complete gene.| tag = OsI_185...")
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Gene Name

BGIOSGA018750

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018750, complete gene.

LocusTag

OsI_18586

Ensembl Transcript ID

BGIOSGA018750-TA

Ensembl Protein ID

BGIOSGA018750-PA

Length

8518

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3981418..3989935

Sequence Coding Region

3989867..3989935,3986725..3987301),complement(3986396..3986527,3986166..3986221),complement(3984387..3984656
,3984172..3984302),complement(3983726..3983840,3983235..3983327),complement(3983082..3983159
,3981418..3981504

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3981418..3989935 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3981418..3989935 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCACACTGTTGTTGGCGCTGCTCCTTGCGCTGGCCAGGGAAGTGGCCGCGGGGGTGGTCAAGGAGAATCCCAAATCCTCTCAGTTTGCCGATCACAGGGCGGAGATCGAGGCGGTTGGCAGCGGGGACGAGCGTCTGGAGCAGGAGGCAGCGACTCGCACGCCGCTCGGGGCATCTGGGGGGCCAGGGCAGCTTCCTCATCCTCCACCACGGCAGCGGCTGGGGATGGAGTACTACCACTCATCGGATTCGGAGCAGGGCTTGCGGCTCGGTATCTCTGCCACCACAAGGCCCACCATGGACTCATCTGCTCTGCCACGTTCCACCGTTGCTCATGCAGCAGACGTGGCCACACAAGACAGGAAGGGGATGAGGAAGACGAAGACGAAGAAGAAGAGGAGGAAGAAGAGGAAGGAGAGTGTGCTGGCGTCCCTACCTCGTGATCAATTGGCATCAAAGACCACACCACTATCACCGTTGGCCATGGGCGAGGGCAGTACCACCGCTGCGGCTGAGAGGGATGCTGCTGACTCCTCATCTGAGTACAGCTCTCCTCTCCGTCGACCAATGGTTTATTATAACTCCGATGTGGCAGCAGTGGATCTCTACCACAGGCAGTTTTTCAAGTACCAGGAAAAAAAAGCTCGTCTAGAACAGTTGCCCACACTCAAGCAGTCCGATTATTATCAAAATATTGCCGATTGGCATAATCTAAATCAGAAGAGAGCAGTTCTGGGTGTAGCAAAATCAGTGCTGAGCCTTTCATCGACTCATGAAATCCTATGCAATGAGGAGTCACAGGATAACAGTATCTACTATCCCAACACCAAGATGATTGCTCACCTATTGGATGGGACTACTTCTGAGATGGAATTGCTCTACTTTAGCAAACACTATGAGATTGTCTTTTTTAAGGTCAATGGGGCATTGGATCTACAAGTCGCGTTGTTAGATACTGAGTTGGAATTTGGCAGTGAAGCTTGTGTGCTAGCCAGGGACAAAAATCTTGATTTGATCTGTAGACGAACAACAATAGTGGCAACGGACCCTTGTGAACACCAAAAGAACCATTATTTATTCATTGATGCTTCGGACTGTGAGGACTGCAATGGAGGAACACTGACAAATTTTAATAGGAATATTGTGGGTATGGTATTATATGCTTTACCCAATGTTGCTTTTATTCCAAGCTCTCTTATTCTGAAGTGCTTCGCATTATGGAAAAAGTTCAGGAAACTTGGTCGACCTCATTTGGGTTTGAAGCTGACTGTGAATTTTCTGGATATATCACATTTAGAGAATCTGTCTCGTGTTTATGGTATTAGTTCTGGCCTGATTGTAGCAAAGGTATCCAATGGTTCTCCTGCTGAGAGAAATGGCATTAGAATGGGCGATGTCATATTTCATTGTCAGCAAGAGTCCATTTCAACCACAGCTCAGTTTGAAGATGTTCTGCTAGATGTATGTGAGAAGCACTTTGAGAAGGGAATCAACTTGAACTCCAAAGTAGATGTTGAGCTCGTTGTTTATAACTTACGCAAGCGTTCCAGGAGAACCGTCAGTTTGTCCGTAGAGTTATCAGAAGGCATGGAGGTCATTGACTAA</cdnaseq>

Protein Sequence

<aaseq>MSTLLLALLLALAREVAAGVVKENPKSSQFADHRAEIEAVGSGDERLEQEAATRTPLGASGGPGQLPHPPPRQRLGMEYYHSSDSEQGLRLGISATTRPTMDSSALPRSTVAHAADVATQDRKGMRKTKTKKKRRKKRKESVLASLPRDQLASKTTPLSPLAMGEGSTTAAAERDAADSSSEYSSPLRRPMVYYNSDVAAVDLYHRQFFKYQEKKARLEQLPTLKQSDYYQNIADWHNLNQKRAVLGVAKSVLSLSSTHEILCNEESQDNSIYYPNTKMIAHLLDGTTSEMELLYFSKHYEIVFFKVNGALDLQVALLDTELEFGSEACVLARDKNLDLICRRTTIVATDPCEHQKNHYLFIDASDCEDCNGGTLTNFNRNIVGMVLYALPNVAFIPSSLILKCFALWKKFRKLGRPHLGLKLTVNFLDISHLENLSRVYGISSGLIVAKVSNGSPAERNGIRMGDVIFHCQQESISTTAQFEDVLLDVCEKHFEKGINLNSKVDVELVVYNLRKRSRRTVSLSVELSEGMEVID</aaseq>

Gene Sequence

<dnaseqindica>1..69#2635..3211#3409..3540#3715..3770#5280..5549#5634..5764#6096..6210#6609..6701#6777..6854#8432..8518#ATGTCCACACTGTTGTTGGCGCTGCTCCTTGCGCTGGCCAGGGAAGTGGCCGCGGGGGTGGTCAAGGAGGTGCCGCTCACCTAGGAGCTCGGGGTCGCCAGCGGCGATGACGACGGCTTCGCCAACACACCATCTCCATCCATCATCGCCGATCTGGTGCCCTCCATGCTCTCGCCGCCGGCTTCGTCCTCCAAACGGCGTCATGAGCGAGTCGCCGTCTTCTTCTCCCAAATAGAGGCCGCCGACTGCCCAGCGCTCAGCACCCGTCCCCACCGCCTCCGCCCCCTCCTTTTGCCGCGGCCCTAGTGACCCCACAGCCGTCCTTCCCCTTCGTCGTTGTCGGCTACCCCTTGCCTCGTTGGCGCCGATATGAAGGACTCCACTTGGACCATTGGAGCACATCCGCCACGCCGCCCCATCCTCCGCGTCCCCACCACCTCCGTCGGCCTCCTCTACCACCGGCCTTGCTAGGGATTGCCTGGAGCGGAGGGCCTCACTCCCGGCGGCCCGTCTCTGTGCCGCTGCGGAGGGACTCATCTCCACCGCCGTCCGCCGGCATGTGCGTCGCCGGGATGCCCCTCATCTCCGCCGTTGGCACCTTCTCCCCACCACCCACTGCTGAGGAAGGAGAGGAACAAAGAAAGAGAGGAGATATGAGACTGATGAGTGGGCCCGTCGGCAAAATTTTCTTTTATGAAAGTTTCTCTCTCCGTTTCCATCGAAAACAATAAAATAATAGGATGTCATGTAGCTAATTACCATATTTTTACAGTGTCCACGAGAAAATACGTGTTCTTTGAGTGTCTCTCAGCAAAGACCATATTTTTTGAGTGTACTATAGCAAATTTTGCCTAAAATCAAATTAGGAATTTCAAAAATAGAATTTTAGAGAAAAAATTTTAGGCATATGTTGGGCATAGCCGTGAGATAGCTCAAGACGAAAATTAAGTACGACCACACAAAACTAGAAAATCATTAGCACATGTTTACTTCAGTTTTAATTATTTTAAACTAGTAAAAATGAATTAGTTTGATATTTTAAAGCTAAACTTTTCGTACTAAATACACCGATTAGTAATTTAAAAATACACTCGCTCCGTCTCAAAATATAAAAATTAGGACCGGATGGAATATTTTTTAATACAACGAATCTTTGTCTGTCCAGATTAATAATACTAGAAAACATCCCATGATCTCATTTAATTATAGCTTCTTATATTTTTATATTTTGAGACGAAGGGAGTAGTTTCGAAAACCAAGATCTTGATCAGGAGAAAAAAAAACGGAAAAGGAATACACGGAGCGACCGAGCGAGGCGAAGCCGCGAGGGGCTCCGCTTCGACCTCGTTATATAGAAGTGCCCACCGGTTTTCTGTGAAATTACCCGCAAAATACCACCGCCTCACCCATCGCCACCCCGTCGTCCTCCCTGCTGACGCAGGCACTAGTGGCGGCATCGACGTAGAACGGAGGCGGCGCGGCGCCACTCTCTCGTCTCCTTCTCCACCCACCCCTGCGTTGGTCCCTCCCGCCAGCTGAAGACGATTTAGGAGGTGGTGGCGCGCAGTATTCTTCCCAAGCCCTAACAAATTCTCCCTACCTCTCTCCGTCAAATTTACACAATTTCTATGGATTTTTTTGGCTCACTAGTTGCAATTAATTGTTTTAGATATGATGAAAACCTGTATTTACTCATGTGTGATTAGTGTGAAGTTTGAGTAATTCTTTTTAGGCCACACACACAAAAAAAAGACGTAATTCCTCCGTTTCATATTATAAAACTTTCTACCATTGCTCATATTCATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTGTGTGTTTAGATTCATTAACATCTATATAAATGTGGATAATGCTAGAAAGTCTTATAATATAAAACGGATGAAGTATCATGCATGTGGTGTCATTTTCCTTTTTCTGAATTCTGAACAATCAATAACAACGTATTATTATCAGTGCATTGCATGCTCTAAAATACTGAATTTTCACCAGCATTTTTTTTTATGTATTTTTGTGTGCTACAGGTTGCTGAAAACCTGCCTCAACTGAGTCGATGAGCATATGTAATCAGTATTAAACAAACAAGCAATCGTTCAGATAGAATATTGTCAAATCTTGCTGATTGGGACGACCACAACACTAGGAGATTATAGAATATGATACCCATGTCTAGACAAATAAAATTGTCCAGATATCACATAACTGAACTAGGTCTTGCTAGTACTGCCCTTCACTTCATATGTATCCATGCCTTCTTATTCCATTATACTTTTTCTTTGTTGTTTGGCAGGTTTTCTATCAGTTCCACTGCTGCTCATTAAGCATTAAGCTGAATGGTTTTTAGATCCACTGTTTACCACTAAGCTGAAAGGAAAATATTCCAACATCTCCTATGTTAAGCTTTTTTTTTAAAAAAAAAATTCTGTAGCTAGGTAATGTTCTTTATCCTATCATTGGGAGGAAGCATTAGCTTTTGTTGTTGTCACATGGACATCCAAAGTTCATGTAAATGATCAGTGTGTATACCAATAAACCATGTTATATTAATGACTTTCGAATGTGCCGTATGCAGAATCCCAAATCCTCTCAGTTTGCCGATCACAGGGCGGAGATCGAGGCGGTTGGCAGCGGGGACGAGCGTCTGGAGCAGGAGGCAGCGACTCGCACGCCGCTCGGGGCATCTGGGGGGCCAGGGCAGCTTCCTCATCCTCCACCACGGCAGCGGCTGGGGATGGAGTACTACCACTCATCGGATTCGGAGCAGGGCTTGCGGCTCGGTATCTCTGCCACCACAAGGCCCACCATGGACTCATCTGCTCTGCCACGTTCCACCGTTGCTCATGCAGCAGACGTGGCCACACAAGACAGGAAGGGGATGAGGAAGACGAAGACGAAGAAGAAGAGGAGGAAGAAGAGGAAGGAGAGTGTGCTGGCGTCCCTACCTCGTGATCAATTGGCATCAAAGACCACACCACTATCACCGTTGGCCATGGGCGAGGGCAGTACCACCGCTGCGGCTGAGAGGGATGCTGCTGACTCCTCATCTGAGTACAGCTCTCCTCTCCGTCGACCAATGGTTTATTATAACTCCGATGTGGCAGCAGTGGATCTCTACCACAGGCAGTTTTTCAAGTACCAGGAAAAAAAAGGTATAAAAGTGCTCCACTTTTCCCCATACGTTCAATTTTGCTTACTACCTAAAACAACAATTGACTATTTCTCAAAACATCTATAAGCTTGGCCTTAGAGTTACTGTCATCCTGTGAGCTATTTTTCACTGAGTTTCATAAACAGTTATAATGCATGTAATCTTTTGATGACACAATCTTTGTCTATATATATTTAGCTCGTCTAGAACAGTTGCCCACACTCAAGCAGTCCGATTATTATCAAAATATTGCCGATTGGCATAATCTAAATCAGAAGAGAGCAGTTCTGGGTGTAGCAAAATCAGTGCTGAGCCTTTCATCGACTCATGGTATTACCTTTTTTTCTCTCCGGTATACATTCTTAGTTACTTTATCCATATGCACATATCACTAAATTTGCTAAGTTTTTATTGATATACAGATGAGAAAGAAATCTATCGCTGCACGGGTATCATCATCGAGTGGGATGAAGTCAGTAAATCTGCCATTCTTCACCTCTTCAGAAATCCTATGCAATGAGGAGTCACAGGATAACAGTATCTACTATCCCAACACCAAGGTAAATTTGTGAACAACATTACTTCTTGGACGTTTGCTCAGTATTCTTCTGTTGAGCTTAGGTTTTGCTTCTTAGTGTTTCCTTGATACTGTAATTTCGCCTTACTTTGTGGTGCTCTATTTCTCTCAGCCCTGTACTTTGGTTATTGATGATACGAATAGTATACCTGTGGCGAGTAATGATTTTTGGTGAATTTTTTTATACATTTCTGTTGCATTTATTATGGTTATTGGTTGAAGTTAAGAATGCTTAGAAATTTCATAGAAAATGCAGCTTCCTAATAGATACAAACTTTACCTAAGCAGTTCAGTGAAATGAATTAGTGCCCCTCCCACATCCACATACACACAAGGTCACACATACAAAACCTAATATGTAGCGATCTTTCAAATAAAAAAAACTGTGAATACATAATGCTAATTTGATACCCCGTCAAGACAAACTAACAATCTACACCCACTATTTCTATGTATTAAAACATAATATACAAAGTCTTTGAATGCACGCAGCTACTGCCAGGTCTTGCCCATCTTAGGCCCCGTTCGATCTCCCGTGTTGGAGATGGATATCTGTTGCACGCAAAATGAGAAACCTTATTAGCACATGATTAATTAAGTATTACTACCTCCATTTCAGGTTATAAGACTTTCTAGCATTGTCCACATTCATATGGATGTTAATGAATCTAGGCACACATATGTCTAGATTCATTAACATATATATGAATGTGAGCAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAACTATTATAAATTTGAAAAATGAATTTATTTGCTTTTTTAAACAACTATTATGTAAAATCTTTTTTTAAAAAACGCATCATTTAACAGTTTGAAAAGCGGTGCTAACGGAAAACGAGGTATGTAGCTCCATGGCCTCACAGTTGGCTGCACTACAAATCTTTCCAATTAACCTTTCTCAGTTGCTGAGCAAATTATCACAATGGCACATTCTGACTATCTTTGAAGTTCTTTTCAGCATAACTACTGGATATTTTGCATGGCTAGCAGTATGCACAAACAGTTTGCACTCACTCTTGAACACACTAAGCCCTAAGCTTTTTTTCACGGCTAACATGGTTGCCCACGAAGGCGAACAATCTGCCTTCACATGATCTTGAGCACATTATGCGCTAAACATTTTTACATGGCTAACTTGGTTACCAGTGAAGATTTCCAATCCAAGTGTAGTCTTGTAGCGTACTCATTGACTGCCCAATATAGTTGTTCAGCTCATGCATTCACCAAATGTTTCACAAATATTAATCCCTGGCATCCCTGGCTAGGAATTTACTAATTTTTCACAGAAGTCTTTTGGATGTTTTTACCTATAGTTGTTGATTGCAGGATTTTATTTCTTGTTTTTTTCTGTTTGTTTTCACCATTGTTCTCAAGACTCATAATTTGTTCTACTTTTGTATTCTCATGTAATCATCTTTTGTGAATGTCATTTACTTCAAATCACAATATTTTCTTTTCAGATGATTGCTCACCTATTGGATGGGACTACTTCTGAGATGGAATTGCTCTACTTTAGCAAACACTATGAGATTGTCTTTTTTAAGGTCAATGGGGCATTGGATCTACAAGTCGCGTTGTTAGATACTGAGTTGGAATTTGGCAGTGAAGCTTGTGTGCTAGCCAGGGACAAAAATCTTGATTTGATCTGTAGACGAACAACAATAGTGGCAACGGACCCTTGTGAACACCAAAAGAACCATTATTTATTCATTGATGCTTCGGACTGTGAGGTGATAATATAAGCAATTATCTGATTCCTTTATTATTATTTAGATAAGATTGTTTAGTATAACTTCATTGCTAATTTTATTCAGGACTGCAATGGAGGAACACTGACAAATTTTAATAGGAATATTGTGGGTATGGTATTATATGCTTTACCCAATGTTGCTTTTATTCCAAGCTCTCTTATTCTGAAGTGCTTCGCATTATGGAAAAAGTTCAGGTATTTTGATTCTTGACTGTTTCTAAAGTTTTTGAATTCTTATAAATGATTAGGAGTAAGTAGAGAGTAGTCTTCAAAACTTATTTGCTCAATTCTTGCATATATATTTATCTCTACAAAAAAAAGAGACAAAGTTGCATTTAGAGCAAATCGTAGCCTAATTGTTATTTATTTATTTATTGCTTGCTCGTGTCTGATTTATTTGATAGTGTTTTGATATGAAAATTGTAACAAATGTGAAATATTTTTATTTTTTTATTTTCATCTATGATTCTTAATTTAACTAATTCCATTTGTTCGAATCTAATAAATTGATGATAATTTGGTGTAGGAAACTTGGTCGACCTCATTTGGGTTTGAAGCTGACTGTGAATTTTCTGGATATATCACATTTAGAGAATCTGTCTCGTGTTTATGGTATTAGTTCTGGCCTGATTGTAGCAAAGGTATACCCCTTTCTCCAAGTTTTCTAATGATAAGCTCTGCAAACTGTAGGCATGTTATGCTTTTTTTTTCTATATTTAGCAAACTACATTTCTATCTTACACACACTACTACACTTTTAATTGTTCGGATCATTTCTGATGAGCTGGACCAACCAATAGCTCTCACCAGCCCAGCCTTTTTTCATTTGACTATCAGTAGGCTTGTGACTTGTGACTTTGTGAGTCCAACAAGTGGGACCAATCTTTTGAAATAATCACAATAGTCCAAGTGTAGCAATATGAAATAGATGCTTGAAAAGGTGGATTTACGATAATTTAATCAAATCTAGTGTGATTTTCTGAAGCTAACTTTTTTAGCACAGATACAGACTGTTCCTATGTTTTTAACTTGATTCTAGGTATCCAATGGTTCTCCTGCTGAGAGAAATGGCATTAGAATGGGCGATGTCATATTTCATTGTCAGCAAGAGTCCATTTCAACCACAGCTCAGGTAAAAATACGTTGCCATTATAAATGCAAGACTTGTGGGAATTTATTTTAAGTGACTTGAGCTATTTCTTTTTAGTTTGAAGATGTTCTGCTAGATGTATGTGAGAAGCACTTTGAGAAGGGAATCAACTTGAACTCCAAAGTAGATGTTGAGGTAAGCTTTTATTGAAATTAGCACATTGCTTTGTGGTTTTTTAGTACAACTTATTTTTTTTTGGCACATATACTATCTTATAGTATAAATTTCTCATAAAAAAACTGCAGTTTTTTAGTGCATTTCACAAAATTAAAACTTGACAAAAGTAATGTTCTAAAAAAATATACAACCGGGTGAGACTGGCAGGTGATTCTGCACTTTCAACTACAGAATCAGCAGAGGTTTGCATATTCGATGGATATTTTCTAATAGTTTTAGTTTTGGATGTTTTTAAAAGGGAAAAACCTGTGTTCCATTTTTTAATGGAAATGAAACAATTTTCTTCAGTTTACCATTCTTACATTCTTAGCACACTAGAACATTGTTTAATCGCGACTGACACGAGCAGAAACTAAAATGAGAACAAGTTAGATCCTGCAACATATAGTTCTAGTACAGAATAAACGAGAGAGGAAAGGACCAAGACATCATACTTATAATCTATTACCTGCCGTGAAATCTTATCCCTATCTAAATGGTACCTTTGATCGAAGAAGCCAAGAGATAAGATTCAGGTCTTGCAGGTTTGGGCACTTCTTTTCTTTTCATACCGTACCCCAATTGGAAAGGCGATACTTGTGATGACCTTAATGATTGCCCAAAAATGCCATGCCATGTGTCCGTTGATAGCTTTGATAACCCATTTCGGAAACTTAATGACTGAAAAGGGATGGATGGGGATACATATCTATTTAAGTAAAAGGAGACTTTAAGAAGCAGTTTTTCTCCATGATATTTTTCAGTCTTATTCAAGAAGTTATCAGCTAGAGACATATTTAATCAAGGTTCAACTGCAATTGGTATCATATCTTTTGTTATCATATACCAGTCCCTCAGGCCCATGCAGCATTTTAATTGTTTGCTTCTTTTTCCTCTGAGAAGAGCAGCATTATGGTCTCTCACTAGGATATCTTTCTCTCTAGATCTCTATCTATCCTTCATCTTTCCGGACTCCCGAATTGAAGAAATTCCTGGGTGATTTCTTTCATTCTATATTATCATCGACAGATAAAACGTCTCTCAGATTGTCTACCCAAAACATTATATTCATTAACCATTTTTTTTCTGTTTAGCATCGACACTCACGTTCCAACCCTTGAGAGTTTTTTTTTTCATAAAGTCTAATTTTAAACTGCACCCTATTAATTACTTTTGTTTCAGAATGCAGAGTATTCCAAATCTGTTTGACTAAGCCATGGGAATCTTTCTTTTCACCATTTTTGAAAATGAATTTTTCAGGCCTAATATCAATTGGTTATGTTTCAATGAAGAGCGTAAATATTGCCCCAATTGTAGGTAAAACAACCACAGTAGATAAAGGAAATTGCGTATCCTAAGAAGTAGATAAATAAATTCTATCCATAGCAGCCAAGACCAAAGTACATTGGTTGTTTTCACTAATGTACTGTCTTGCAGCATTTTCGAATTTGAGTTGAATAGTTCAAATATTAATCAATGAAACTCTTTTGGTTTCAGATAAACCCAAAAAGTCAGGATTACATTTCTGTTGACAAATATACTTTTTGCCTTTACAGCTCGTTGTTTATAACTTACGCAAGCGTTCCAGGAGAACCGTCAGTTTGTCCGTAGAGTTATCAGAAGGCATGGAGGTCATTGACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018750

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