BGIOSGA018767

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018767| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018767, complete gene.| tag = OsI_185...")
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Gene Name

BGIOSGA018767

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018767, complete gene.

LocusTag

OsI_18554

Ensembl Transcript ID

BGIOSGA018767-TA

Ensembl Protein ID

BGIOSGA018767-PA

Length

2971

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3700093..3703063

Sequence Coding Region

3702912..3703063,3702368..3702488),complement(3701612..3701752,3701376..3701521),complement(3701116..3701192
,3700658..3700813),complement(3700428..3700571,3700093..3700244

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3700093..3703063 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3700093..3703063 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTGTCGCGTGCACAACGCAAACGGAGAATTGAACAACGATGGCATCCTTGTAATGACGCCATGATCCCACGCACTCAGGCCCACATGCCAATGACACAGAATGGACGCGGGACGCGTCCTCCACGGGCAGAGCTCATGCAACCGCGGGACCGGTTCAAGGTTCTTAAGAACCACGCCATGCAGGAGGACATAAATCCATGTTTTTTCTATGCTGTAACTGGTTACTTCGATTATCGTGCAGAGAACAGACCCCGTCATAAAGAAAGTGCAGCAAGTTCAATCCTAGGAGAGATTCCAAAACCATTGAAATACACACATCTTGTAGGGGGGCAACAAGATAGAGATTCTTTGAAGAGACAGACAGCAGATTGTAGCATGAGTCTTGGTGAATCATCTAGTATTCCAAAGATAGCAAGATCAATCCTAGGAGAGATTCCAAAACCATTGCGATACACACATCAGTATAACCGGGCTGACTTGGCAGTAGTGTATGAGGAAGCAATCTTTTTTGTGCTTCAGGCATATAATGAGGAGGTTATCCATCTGTCCATGAGGATTTACAGGTGGGTAAGGATTCCTATTTCCGCGGAGTTGCAGAAATGGTCAGTCCCATCTACCATAAAAAGCATTGGTTCATTGACTGTTCCTAATGTGCTTGTTGGAATGCAAACTCTACCAGTGGAGAAGAAGGCTGGTTCAAGCTGCTCTCCTGCTATGAATTCAAAAGGAGAGGAAGATTCTTCAAAGTTGGAGGAACCAAAAGCATCCAAGACTCCTGAGTACAGAATGGAGAAGAAGGCTGGTTCAAGCTGCTCTCATGCGCTGAACTCAAAAGGAAAGGAAGAATCCTCAGGACGTTTGGGAAAAGAGCCACAAGCATCAAGGGCTAATAATCCGGTGCTGCTATCAACACCAAAGAGTAGAAGCCAAGGAATTAAACACAAACCTCAAACAGGGGAGAAGGCGGCCAGTTCAAGATGCTCTACTGCTTTCAACTCAAAGCGAGGGGAAGATTCGTCCGGATGCTCGTCTGTGTCTGTGCCCATTGGGGCGATGATGATAAATGTAAACCTATTAGACTAG</cdnaseq>

Protein Sequence

<aaseq>MPLSRAQRKRRIEQRWHPCNDAMIPRTQAHMPMTQNGRGTRPPRAELMQPRDRFKVLKNHAMQEDINPCFFYAVTGYFDYRAENRPRHKESAASSILGEIPKPLKYTHLVGGQQDRDSLKRQTADCSMSLGESSSIPKIARSILGEIPKPLRYTHQYNRADLAVVYEEAIFFVLQAYNEEVIHLSMRIYRWVRIPISAELQKWSVPSTIKSIGSLTVPNVLVGMQTLPVEKKAGSSCSPAMNSKGEEDSSKLEEPKASKTPEYRMEKKAGSSCSHALNSKGKEESSGRLGKEPQASRANNPVLLSTPKSRSQGIKHKPQTGEKAASSRCSTAFNSKRGEDSSGCSSVSVPIGAMMINVNLLD</aaseq>

Gene Sequence

<dnaseqindica>1..152#576..696#1312..1452#1543..1688#1872..1948#2251..2406#2493..2636#2820..2971#ATGCCGCTGTCGCGTGCACAACGCAAACGGAGAATTGAACAACGATGGCATCCTTGTAATGACGCCATGATCCCACGCACTCAGGCCCACATGCCAATGACACAGAATGGACGCGGGACGCGTCCTCCACGGGCAGAGCTCATGCAACCGCGGTGTGCTTCGCTTCTCCACGCCACGCCACGCGCGCGCCTCTCGCCGCCTCTGCCGCGGGTGCTTCCTCTCCAGCTAGGGTTTCCACGACGATCATCACCGGCGACGAAGGCCGCGGGGGAAGCTGTCGCGACGCGTTCCGGTGAGCTCTCTCTCCTCATCTCCCATCCTGGTCTCCCGGAGTTGCTTGCCCGTAACGCTGCCCTGGTACTTAGCTTGTGGGGGTTGGGGGGGGGGGGTTGGGGTTTTGCTTCGCCACGCGAGGGGTAGTTTAGCGGCGGCGATCCGCCCGCTCACCCACCATCATCGCGATTCCCCTAACCGCCCCGCGCCGCCGCCGCCATCGATCCTCCTCGTCGCCCTCTCTGTCCTCCTCCACCAGCTTAATTGATGGGGAATAGTTCCACATTTTTTGCAATTTTCAGGGACCGGTTCAAGGTTCTTAAGAACCACGCCATGCAGGAGGACATAAATCCATGTTTTTTCTATGCTGTAACTGGTTACTTCGATTATCGTGCAGAGAACAGACCCCGTCATAAAGAAAGTGTATGTACACAACATATCTCCTGATTATTGTTGGAATAATTTATTTTATCCATTACCTGGTCAGTGATAATCATTCTCCCTTGATAGGACCAGCGCACAGATGGTACTCCATCCACATGCCAGTATGAGGATGATGTTCTATGTCCTGAAATGCCATATCATGTAGAAGATTATGGAAGTTTTGCTGGAGCATAGAGGTAACTTGTACCATCTGCCGTAGAGAACAGGCAAACTGACTCTCTATGCATGGGCTGTTTGGCTGCTCGCGTTGCGGCTGCACCACAGCCAACAACAACAATGTTGCATGGAGCAAGGCAATGGCAAACATCAGCAGCCACGGCAACAAACCAACCACCTGAACGGTGTGGCATGACACATACTCAGTATGTCCGATCCAATGTAAACTCACTGAAGATGTTCCAGGATGGTGCAACGCTTGTAGGGGGCCAACAAGATAGAGATTCTTTGAAGAGACAGACAACATATCGTAGCATGAGTCTTGGTGAATCGTCTAACGCTCCACATGTACTGCCTAACTTTCTATTTCAATTTTGTGCATTGTTCATATTCTTGTTTTTACATTGTTTCTTATTTATAAATATTTGTTATTCTCAGGCAGCAAGTTCAATCCTAGGAGAGATTCCAAAACCATTGAAATACACACATCTTGTAGGGGGGCAACAAGATAGAGATTCTTTGAAGAGACAGACAGCAGATTGTAGCATGAGTCTTGGTGAATCATCTAGTATTCCAAAGGTACTGGCTAACTTTCTATTTCAATTTTGTGCATTGTTCATATTCATGTTTTTACATTGTTTCTTATTTATAAATATTTGTTATTCTCAGATAGCAAGATCAATCCTAGGAGAGATTCCAAAACCATTGCGATACACACATCAGTATAACCGGGCTGACTTGGCAGTAGTGTATGAGGAAGCAATCTTTTTTGTGCTTCAGGCATATAATGAGGAGGTTATCCATCTGTCCATGAGGTATGACATGTTATGGACCTGTTCTGCTGGCAATCATGCTCTTGACGATGCATTTCGACTTGCCCACCAGATATGTTCCCAAAAGAATTGCAAATGCCCAATTATACTCTTTTTGAAAGTGAGTTCTTGATCTCATTTGTTCAACCTTTTGTCTTAAAACTTAGATTATGATTCTAAAATTAGGATTTACAGGTGGGTAAGGATTCCTATTTCCGCGGAGTTGCAGAAATGGTCAGTCCCATCTACCATAAAAAGCATTGGTTTGAGAGTTGTGAAGACCTCTCAGGAAGCTTCCACGTGAGGTGGCACATCGTAAAAGATGTGCCTACCTCGTGTTGTTTACAAAGGATGAGAAGGAGAAGCTATTTGATTATGTTCCTTGTTCAATGTTATGGCATGTTCCTTATTGAAAGGGAACAGGCATGTTCCAAACTTACAGAGATTATCCAAACCATCGACCTCCTCATCTGAGTAGATTTGTGAAGTTGGAGGAACCAACAAATTAAGGATTCCTAAGTGCAGAAGTAAGGTTCTTCCCTTTCCATGCTTTCAATGTCAGTAGGTTCATTGACTGTTCCTAATGTGCTTGTTGGAATGCAAACTCTACCAGTGGAGAAGAAGGCTGGTTCAAGCTGCTCTCCTGCTATGAATTCAAAAGGAGAGGAAGATTCTTCAAAGTTGGAGGAACCAAAAGCATCCAAGACTCCTGAGTACAGAAGTAAGGTTCTTCCCTTTCCATGCTTTCAATTCCAGTAGGTTCATTGATTGTTCCTAATGTGCTGAATGAAACACAAACTCTACCAGTGGAGAAGAAGGCTGGTTCAAGCTGCTCTCATGCGCTGAACTCAAAAGGAAAGGAAGAATCCTCAGGACGTTTGGGAAAAGAGCCACAAGCATCAAGGGCTAATAATCCGGTGCTGCTATCAACACCAAAGAGTAGAAGCCAAGGTTCATTCACAGTAGGGTCATTGACGGTTCCTGTTGGGCTCAATGAAAAGAAGGCCGTGTTTAGTTTCCCCCTATTCCCAACTTTCTATCACATTATATCACATCAAAAACTTTCCTACACACATAAACTTCCAATTTTTTTTCCAAATTCCCAACTTTCTTCAAACTTCCAACTTTTTTCAGGAATTAAACACAAACCTCAAACAGGGGAGAAGGCGGCCAGTTCAAGATGCTCTACTGCTTTCAACTCAAAGCGAGGGGAAGATTCGTCCGGATGCTCGTCTGTGTCTGTGCCCATTGGGGCGATGATGATAAATGTAAACCTATTAGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018767