BGIOSGA018772

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018772| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018772, complete gene.| tag = P0676G0...")
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Gene Name

BGIOSGA018772

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018772, complete gene.

LocusTag

P0676G05.13

Ensembl Transcript ID

BGIOSGA018772-TA

Ensembl Protein ID

BGIOSGA018772-PA

Length

3418

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3578875..3582292

Sequence Coding Region

3582122..3582292,3581749..3581797),complement(3581393..3581545,3580988..3581124),complement(3580828..3580897
,3580547..3580637),complement(3580380..3580449,3580201..3580296),complement(3579805..3579904
,3579622..3579708),complement(3579288..3579358,3578875..3579021

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3578875..3582292 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3578875..3582292 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCGCCGCCGCCGCCGCCGAGGCTTCTGCTCGCCTCCCACGCCGCCGTCCGAGCCGCGGCGTCCGCTCGCCGGGGCCGCCTCGCCGGCGACCACCACCCGCCGCAGGTCGCCGCCCTCCGGCGCGGGGACTGGGTCAAGCTCATCTGCGGCGCCAGCTTCGAGGATGCTGCCGATGTCAGAAATCTCTCCCTTGTGTACACGCTTGCCGGAGTGGATTGCATCGATTGTGCAGCAGACGCATCGGTGGTGGGTGCAGTGAATGAAGGTATTGATGTAGCAGCCTCAATTGTGCCATCAGTTCAAAGTCCATGGGTGATGATTAGTGTTAATGACGATTGCAGAGACCTTCATTTCCGTAAAGCTGAATTTGATCCTGAGGATTGCCCACCAGATTGCTCAAAGCCATGTGAGAAAGTCTGTCCTGCTGATGCAATATCATTGGAGAGGGTTATGATTGAGGGAAAGCACTCTCAGTCTGATCCTTCATCTGGTAAACTTGAGGGTGGTGTAATTACGGAGCGGTGCTATGGCTGTGGTCGATGCTTGTCAGTTTGCCCTTACGACAGAATAAGAGCTATGTCGTATGTTCGAGATCCTACTAAGACTGCGGAACTGTTGAAAAGGAATGATGTCGATGCAATAGAGATACATACCACTGGAAAGGGAACTGATATGTTCAATACCCTCTGGAGCAACCTGGGTGACTCAATCAATAATGTGAAACTGATTGCAGTCAGCCTGCCTGATGTTGGTGATTCAACAGTTAATTTCATGAATGCAATATACACAACAATGCAGTCCCATCTTCAAGGCTATAATCTTTGGCAGTTAGATGGCCGGCCGATGAGTGGCGACATAGGCCGAGGTGCAACGAGGGAAACAGTATCCTTTGCTGTTCATTTGTCTTCAATGTCAAATAGGCCTCCTGGCTTCTATCAGTTGGCTGGTGGCACCAACTCATACACCATAGAATCCCTAAAGAAAGCTGGTCTTTTCCAATCTACAACTTTTGCTGCAACATCTGGAGTGACCGATTGTCAGCAAGCCTTTATTGGAGGGATAGCTTATGGCGGCTATGCTCGCAAGATTGTTGGAAGAGTTCTACGCAAAATACCAGCACAATTTGGCCATGCACGCATTGAGGACCACCCAGATTATCTCCTGGAAGCGTTACAAGAAGCTCTATCACTAGTCGGGCCTGTGAAAGGTTATCCAACCTTGCCAAGTCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPPPPPRLLLASHAAVRAAASARRGRLAGDHHPPQVAALRRGDWVKLICGASFEDAADVRNLSLVYTLAGVDCIDCAADASVVGAVNEGIDVAASIVPSVQSPWVMISVNDDCRDLHFRKAEFDPEDCPPDCSKPCEKVCPADAISLERVMIEGKHSQSDPSSGKLEGGVITERCYGCGRCLSVCPYDRIRAMSYVRDPTKTAELLKRNDVDAIEIHTTGKGTDMFNTLWSNLGDSINNVKLIAVSLPDVGDSTVNFMNAIYTTMQSHLQGYNLWQLDGRPMSGDIGRGATRETVSFAVHLSSMSNRPPGFYQLAGGTNSYTIESLKKAGLFQSTTFAATSGVTDCQQAFIGGIAYGGYARKIVGRVLRKIPAQFGHARIEDHPDYLLEALQEALSLVGPVKGYPTLPSL</aaseq>

Gene Sequence

<dnaseqindica>1..171#496..544#748..900#1169..1305#1396..1465#1656..1746#1844..1913#1997..2092#2389..2488#2585..2671#2935..3005#3272..3418#ATGGCGCCGCCGCCGCCGCCGCCGCCGAGGCTTCTGCTCGCCTCCCACGCCGCCGTCCGAGCCGCGGCGTCCGCTCGCCGGGGCCGCCTCGCCGGCGACCACCACCCGCCGCAGGTCGCCGCCCTCCGGCGCGGGGACTGGGTCAAGCTCATCTGCGGCGCCAGCTTCGAGGTAGTAGCATATACTTCCGCTTCCTTCCCTGCTGGAGACTGAGTAGTGAATTGTAGTGGGATTGAGCTTGAGCTGTGCTACGTATGGAGTGGATGATGAGAAATGAGAGAGATTTTTTTTTTTCCCTTCTTGTCAATTGTCAATTTTGCAAAGGGAAACCCAGCTCAATTAACCTGTCAAGGAACGATTTCTGATGAAGTTGGTGCAAATCCCTCGTCTCGGGGACATCGATTTTGAATTTATTGAGCAATGAAACTAGCAATGGTGATAGTGTGAATGGAAATTGTGAAATGCTTGGGATGTGATTTTCTTGTTCTTGTGTAGGATGCTGCCGATGTCAGAAATCTCTCCCTTGTGTACACGCTTGCCGGAGGTATGGTTGTTGCTCTAATTGTAAATATTCCCGTGGAGTACATATGTAGCATTTCAGACTGGCATCATAACATAATGGTAAAATTTGTTCAAAATGATCATCTCAACTTGGTAAAATATCTGTATATTTATCTACGGTGATTTAATTGGAATATGATAGTCTACCCTTAGAAAAAAAATCATGGATAGATTTTGCGTATGCAGTGGATTGCATCGATTGTGCAGCAGACGCATCGGTGGTGGGTGCAGTGAATGAAGGTATTGATGTAGCAGCCTCAATTGTGCCATCAGTTCAAAGTCCATGGGTGATGATTAGTGTTAATGACGATTGCAGAGACCTTCATTTCCGTAAAGCTGGTAAATGATATGCTCTTTACAAAAGTTGTACTCTATATTTTGAGTTTAGTTTAGGAAATTTGTTAATACCACTTTGACATAATAGACTTGTTTTGATTATCCTCATTTGAGTCTGGAAAGTTGGAAGTAAAAAAACAGTTCTGCTATATGCTGTTTGTAAACTTGGTTTCCTTCTTTCACTAGCAAGACCTGCCTCATGTTTATGGATTCCATAACACATTTTGTATTTTGCTTCTAAAGACTTCCATTTCTATTTGCTGTTCTCTAGAATTTGATCCTGAGGATTGCCCACCAGATTGCTCAAAGCCATGTGAGAAAGTCTGTCCTGCTGATGCAATATCATTGGAGAGGGTTATGATTGAGGGAAAGCACTCTCAGTCTGATCCTTCATCTGGTAAACTTGAGGTATCGATTGGTTTGTTTACTTTATTCAGCTACTGTTTATTCTCTTCATGAAATTAACTTTTATTTTATGACCTCTGCTGCTTTGTGTAGGGTGGTGTAATTACGGAGCGGTGCTATGGCTGTGGTCGATGCTTGTCAGTTTGCCCTTACGACAGAATAAGTGAGCACTGACTGCTGCCTTTCTTTGTTTTACCTTTATGTCATCATCACAATAGCTTACATGATAGTTGTTCCCACAAAGTGTACTTTAATTGAACATGTAACATCACCATGTTTTTAATCATAATCTGATACTTCCACACCTTTGTGTATCTTATAGAAGCTACAAGCCTTGCTTGAAACCATTTCAGGAGCTATGTCGTATGTTCGAGATCCTACTAAGACTGCGGAACTGTTGAAAAGGAATGATGTCGATGCAATAGAGATACATACCACTGGAAAGTATGTTCCCTTTTCTTTGAGGGTTTTTGTACCAAGGGACATTTGTCTTATTCTCTGTTACTCGGATCAATTGATCTAATATTTGTCACTACTATAGGGGAACTGATATGTTCAATACCCTCTGGAGCAACCTGGGTGACTCAATCAATAATGTGAAACTGATTGCAGTAAGTTTGCACTTTGTTTCTTGATGGATGTGTTTACTATTGCATTTATCATCATAATCAATAAAAAAACTCACACATTTCAGGTCAGCCTGCCTGATGTTGGTGATTCAACAGTTAATTTCATGAATGCAATATACACAACAATGCAGTCCCATCTTCAAGGCTATAATCTTTGGCAGGTTTGCTATGAAGAAAACAAATGTATCAACTGCAGATTCTAATTTGTTTGTACATGATTATACTGTTCATAACTATACTTTTATCAATTTGAAATTCTACTAGCACTATTGTTTTCTTGATGTTGGATAGTTCATTCTACATTCTGTTTTTCTGTAAATGCTAGCATTACTTTGCTGGTTCACTTCATGTCATAATCTGATCATGCTTATGATTTATGCTTCTACTGATCCTTATCCATATCCATAACCATGCTCAAAATCTGAGGTTATTCAAGTTACTTTATTTATACAAGCAGTTAGATGGCCGGCCGATGAGTGGCGACATAGGCCGAGGTGCAACGAGGGAAACAGTATCCTTTGCTGTTCATTTGTCTTCAATGTCAAATAGGCCTCCTGGTAAACAAAGCCAATCTTTAGAAAAAAAAATATACCTTGTTATGGCTTTGCTATCGTCCACATTTCTAAGTATTTTCTACTAATATGGTTTTGAAGGCTTCTATCAGTTGGCTGGTGGCACCAACTCATACACCATAGAATCCCTAAAGAAAGCTGGTCTTTTCCAATCTACAACTTTTGCTGGTATTTTGTTTACTTTTTTTTTTGAACATGTCACCGGATTTTGTTTACTATGTTCCTTTTCTGTGCTCAAAACTTGTTCAACTCATGAGCTCAAAGAATACTTTAGGCAAAATCACATTTTAAGCCCTTGAACTATTAAATTGTGTGCAATTAAACCTATGCCTTTTGAAAGAGCAATCAAACTTATGGTTGATATACTGGTAATATGTTTAATTTAATCCATGAACTATCCAACTTTATTTATCTTACTGAAACTTGGGCAGCAACATCTGGAGTGACCGATTGTCAGCAAGCCTTTATTGGAGGGATAGCTTATGGCGGCTATGCTCGCAAGGTTTGCTCTTGACATTATATTTACAGTGTTTTTTGTTGGAATGATACTAAAGTATTCAGCAAATACCTGATAGAATAGAAAGGCTAAAGCATAGATACTGTCAGTGGACGCACCAACACCTAGCAACTAGTTAAATGAATGTTGATCTCTATTTTCCTATTTATGAGTTGCATTTCTCATCCGATAGAATTCTAAATGAAATCATTGCTAGAATAGTCTTGTATGTCATGTTCTTAGCTCATTTTGTTTTTTCTGCTGAGTTGCAGATTGTTGGAAGAGTTCTACGCAAAATACCAGCACAATTTGGCCATGCACGCATTGAGGACCACCCAGATTATCTCCTGGAAGCGTTACAAGAAGCTCTATCACTAGTCGGGCCTGTGAAAGGTTATCCAACCTTGCCAAGTCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018772

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018772&oldid=47528"