BGIOSGA018775

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018775| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018775, complete gene.| tag = P0676G0...")
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Gene Name

BGIOSGA018775

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018775, complete gene.

LocusTag

P0676G05.7

Ensembl Transcript ID

BGIOSGA018775-TA

Ensembl Protein ID

BGIOSGA018775-PA

Length

5869

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3543050..3548918

Sequence Coding Region

3548613..3548918,3547624..3547770),complement(3547015..3547149,3546322..3546439),complement(3545498..3545622
,3545049..3545174),complement(3544881..3544961,3544555..3544617),complement(3544389..3544463
,3544216..3544294),complement(3544020..3544120,3543650..3543763),complement(3543363..3543476
,3543195..3543266),complement(3543050..3543097

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3543050..3548918 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3543050..3548918 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACTCCGCGGCGGCGGCGGCGGCGTGCGCCTCGGCCCCGGCGTGGGTGGTCGGCGGCGGCGCCGGCGGGGGAGCCAGATCCGCGCGGGGGCCATGCGGGATCAGGGTGTGCGGGCTCGGGGGCGAGGCGGTGGCGCTCCGCTCGCTGCGGATCTCGCAGGGGGCGGCGGTGAGGCGGGCGGCGGTGGCGGCGAGGGCGGCCGCGGAGAACGGCGTGGCGGGGAGCGGCGGGTTCGACTACGACCTCGTCATCATCGGCGCCGGCGTTGGTGGGCACGGCGCGGCGCTCCACGCTGTCGAGGAGGGTTTGAAAACTGCAATTATTGAGGGAGATGTTGTAGGTGGGACTTGTGTAAACAGAGGTTGTGTCCCATCAAAAGCACTTCTTGCTGTCAGCGGTCGCATGAGGGAGCTTCATGATGAACATCACATGAAGTCATTGGGTCTACAGGTTTCATCCCCTGGATATGACAGACAAGCTGTTGCTGATCATGCAAACGATCTCGCCTCTAAAATCCGAAGCAACTTGACTAATTCAATGAAAGCTCTGGGAGTGGATATATTGAGTGGTTTTGGTGCAATTGTTGGAAAACAAAAGGTACGGTATGGAAAAGTTGGTTTTCCAGGCAAAGAAATCACTGCAAGGAATATCATCATTGCTACTGGATCAGTTCCTTTTGTTCCCAAGGGCATAGAGGTTGATGGGAAAACTGTTTTTACCAGTGATCATGCACTAAAACTTGAGTCTGTCCCGGACTGGATAGCAATCGTTGGAAGTGGATACATTGGGCTTGAATTCAGTGATGTATATACAGCTCTTGGAAGTGAGGTTACTTTTGTTGAAGCTCTTGACCAGCTAATGCCTGGTTTTGATCCTGAAATTGCAAAATTAGCCCAGAGAGTCCTTATCAACCCTCGGAATATAGACTATCACACTGGTGTTTTTGCAAGCAAGATTACTCCAGCAAAGGATGGAAAACCTGTGCAGATTGAGCTCATTGATGCAAAAACAAAGGAACACAAAGAAACCCTCGAGGTGGATGCAGCCCTTATAGCCACAGGACGGGCACCATTCACAAAAGGACTTGGCTTGGAAAATATCAATGTTGTTACACAGCGTGGTTTTATTCCTGTTGATGAGCGAATGCGAGTCATGGATGCAGATGGCAATGTGGTTCCGAACTTATATTGCATTGGAGATGCCAATGGTAAACTCATGCTTGCTCATGCTGCCAGTGCACAGGGAATCTCTGTTGTCGAACAAATCTCTGGGAGGGACCACATCCTAAATCATTTAAGCATCCCCGCTGCTTGCTTCACTCATCCAGAAATTAGTATGGTTGGGCTTACAGAGCCACAAGCCAGAGAAAAAGCTGATAAAGAAGGATTTGAGATAAGTGTTGTTAAGACCAGCTTTAAGGCTAATACAAAAGCATTGGCAGAAAATGAAGGAGATGGACTTGCTAAGTTGATTTACCGGCCTGACACTGGAGAAATTCTTGGTGTGCACATTTTGGGTTTGCACGCTGCTGACCTCATCCACGAGGCATCAAATGCCATTGCCCTAGGAACTCGGTTGCAAGACATCAAGTTTGCTGTTCATGCACACCCAACATTGTCCGAGGTGCTGGACGAACTCTTTAAAGCAGCCAAGGTTAATTCGGGTGTTTCTCATTCTGTAAATGAACCAGTTGCAGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MNSAAAAAACASAPAWVVGGGAGGGARSARGPCGIRVCGLGGEAVALRSLRISQGAAVRRAAVAARAAAENGVAGSGGFDYDLVIIGAGVGGHGAALHAVEEGLKTAIIEGDVVGGTCVNRGCVPSKALLAVSGRMRELHDEHHMKSLGLQVSSPGYDRQAVADHANDLASKIRSNLTNSMKALGVDILSGFGAIVGKQKVRYGKVGFPGKEITARNIIIATGSVPFVPKGIEVDGKTVFTSDHALKLESVPDWIAIVGSGYIGLEFSDVYTALGSEVTFVEALDQLMPGFDPEIAKLAQRVLINPRNIDYHTGVFASKITPAKDGKPVQIELIDAKTKEHKETLEVDAALIATGRAPFTKGLGLENINVVTQRGFIPVDERMRVMDADGNVVPNLYCIGDANGKLMLAHAASAQGISVVEQISGRDHILNHLSIPAACFTHPEISMVGLTEPQAREKADKEGFEISVVKTSFKANTKALAENEGDGLAKLIYRPDTGEILGVHILGLHAADLIHEASNAIALGTRLQDIKFAVHAHPTLSEVLDELFKAAKVNSGVSHSVNEPVAA</aaseq>

Gene Sequence

<dnaseqindica>1..306#1149..1295#1770..1904#2480..2597#3297..3421#3745..3870#3958..4038#4302..4364#4456..4530#4625..4703#4799..4899#5156..5269#5443..5556#5653..5724#5822..5869#ATGAACTCCGCGGCGGCGGCGGCGGCGTGCGCCTCGGCCCCGGCGTGGGTGGTCGGCGGCGGCGCCGGCGGGGGAGCCAGATCCGCGCGGGGGCCATGCGGGATCAGGGTGTGCGGGCTCGGGGGCGAGGCGGTGGCGCTCCGCTCGCTGCGGATCTCGCAGGGGGCGGCGGTGAGGCGGGCGGCGGTGGCGGCGAGGGCGGCCGCGGAGAACGGCGTGGCGGGGAGCGGCGGGTTCGACTACGACCTCGTCATCATCGGCGCCGGCGTTGGTGGGCACGGCGCGGCGCTCCACGCTGTCGAGGAGGTAAGTGCGGACCATGTTTACTGTTCGGTGTAGAGCTCTAGCCGTTTCTCGTCGGCGGCGCTGTACCCGTGATCTATTGACATTTGAACTGATGACTGTATAGAATGATCTATGGGATTTCCGGTATTATGGAGCTGCGAACTTAAGTACTTAGCTGAATTCAAAATTTCAAATGAACCACTTCGCTAGAGCTCATGCTTTGTTGAAATTTACACTGCGAAATGGTAACTGGAGGTTTTTGTTAGTAAGTAATTTGGTGCTAGCACAGGTAAACTGTTTAAATTGAGTGCTATCTTGAGCTTTGCTTTGGGACTTCAGTGGTTAGTCCATTGCAGTGCGCTGATAGTCTATTAAATTTATGCTGAGACTATCACTATGAAACTAGAAAATCTTCCTTTCTAGTTGAAATATTTTTTTTTGTCTTGATGGATTGATGATCGTAGAGGTAAAGAATATATAATGTGCAACTCAACGCATTTGTAAACCAACTCTATCTTGAATGCAGCACCAGCAAAATAGTGACCACTCGGTTGTTCTGGTGGTTATCTATTTACAAATTTCAATGTTGGCACACTTTGGCCCTGTTGGAGCCTGCCAAGTGCCAAGCAGTAGCAGTTTAGTTGGATTATTGGCTTACTTGATATGTTACTTCTTTGTTGATATATCCGACTGGCCAACATACAAAAATGCACACACTTTTTTGTTTACAATCCAAGGCTTTTCTGTAGCATATAACGCAAATAAGATTGCAGAGTTATAAATGTAATAACCTGTCTTCGTTATTACTAGTCCACTACTGCTGTCTCAATGTGTTAAGTGTTAACTGGCCCAAATTTGTGCAGGGTTTGAAAACTGCAATTATTGAGGGAGATGTTGTAGGTGGGACTTGTGTAAACAGAGGTTGTGTCCCATCAAAAGCACTTCTTGCTGTCAGCGGTCGCATGAGGGAGCTTCATGATGAACATCACATGAAGTCATTGGGTCTACAGGTATTTTGTTTGGATGAATTACTGCATTAGCCTCTTTGTTTGATGTGTTGAAACTTGAAAATAGTTCACATAACAATTAACAAATGAGTGGACTTTTAAAAGATTTGTGTTCTACAGTATTTTTTAGTCAATTTCTTTTAGGTACGACCAGTCCATTCAAGCTGGTTCACAAAATAGGTACTGACACAGGGAGTGTAAAGCGTGCGAGGTTCCTGTTTTCATGTTTATCATTTGTGTCCTGAAATTGATGTCTATGTCAACTCTATGGAGCTTACCTTGTTTCTTACTCACAATGCATCAGGTTTGCTATATGTCTATGAGTCTGTATCTCTGTGTTTTGTGAGATTGTCCAAAATTTAATGTCACCAGTTACTAGGCCTATTACCTGTGGCCTTTGGGCATCGGCTGTTTTCTCATTCTTGTGTGTTGCATTGTGTCCTGCATAAATCATTAAGCCCATTCTCTGTGCAACAGGTTTCATCCCCTGGATATGACAGACAAGCTGTTGCTGATCATGCAAACGATCTCGCCTCTAAAATCCGAAGCAACTTGACTAATTCAATGAAAGCTCTGGGAGTGGATATATTGAGTGGTTTTGGTGCAATTGTTGTAAGTCATCCATAAGACCATAACTTCACTGTCATGTACTGAGTTATGCACATGAGTGTTACATTCTCATTTTTGGGCAAGAACAGATGTTAATATTTCTCTTGACTTATATACATGTTATATGTAAACCACTGAGTTAAATCCTTACGGATAGCACTTTGTTGAATTGTAGATGCTTAGCTTTTGGTTGCATATCAATGTCGGTGTGTCCTACAATCAAGTCTATTCAAATGTTACCAAGTTATAGCTGGAAGTGCATTTATGTGCCCCATGTTTTGTTATGGTTCAATAATTGACATATATACTAAATTAGCAGTAATTTCTTGTGGAAAGCAGCAAGTTTATTGGTTCTTTTAGTTATGAGCCATTAAAATGTACATACATCACTACTAGATGTATCATGTTACTATTTGATGTGGCCAATTCAGTCGCTGATGGAATAAGCTGACCTATTCTTTGAACTTGACAACAATCATATCTTGTGGTAGAAAATGCATACAGGAATATCTCATCTGCGAAATATGACATAATAGAGGATTGCCGACATTAATCTATTCCTATCATGATTTGATCAGGGAAAACAAAAGGTACGGTATGGAAAAGTTGGTTTTCCAGGCAAAGAAATCACTGCAAGGAATATCATCATTGCTACTGGATCAGTTCCTTTTGTTCCCAAGGGCATAGAGGTTGATGGTAAGTACTACCTTTTCTTCTCTTGATGGATCATGCATCTCATTTAGTTAGCTCTAGTTTCCAGACTGAACATTGAAGCAAGTGATCAAATGCTGAAAGAAGCATGTACTTCTAGCTCAGTTGTAGTGACCATAGTCTTAGCTGTGTGCCATGTGATTACTGAATTGTTTTGTATATACAAGCTTTGTGGTAGCTTATTCTGAAACAAGTTTTCCTTATTACAATTTACATACTTAAATGTTTTTCTAATTGTCCATGACTGTTGGTATTTATTTTGGTTAATAAAACCCATTTTGTTGCAACTTGCGGCATGTGCCATAACTAGCATAATAAAGCCACACATGTTTTATTAGTTTTAGACTTCTAGAATCACTAGTGGCAATAGATAAAACATAATTTACTATTTGTTATGCCTGAATAACCTTAAATGTGTGTCTGTATTTGGATACCTTAGAGATCCCGATAGAAAGCATTCGATCTTGGAAGCCACATGATCTTTGTGCCCTTCTGCTACTGCTTCCATCTTTTGATGTTATAATCTCAGCATAGAGGAGACACATTACCATTATTACATTATGTCCTACAGCTGAATGACATGGAAGATTAGCACAATTGGGTTTGCAGACCCAAATGTGTTGCCTACCATTTCTTGTTATACCTATTGTTCTTACAGAAGCCTGCTGGGCAACTTTTGTGCAGGGAAAACTGTTTTTACCAGTGATCATGCACTAAAACTTGAGTCTGTCCCGGACTGGATAGCAATCGTTGGAAGTGGATACATTGGGCTTGAATTCAGTGATGTATATACAGCTCTTGGAAGTGAGGTACATGAAAGTTCTTGCTGTGAATAAATTCAAGGATATGGCTTAGAGAATCATACAGTGAGCATGGAATCATGCAATTATTGCAGAAACATGGTTCTACAATGGGTATAACTGGAAAAATTGCATCTGTAGTTATCTGGATATGTTATCCTTTTTGCTTTGCATATAGTGACCAGTGAGGTCCACCCTGTTATTTGATTGGATGCAAATTTGACTACACTGTTTTCAACTTACACAAATGATTCTATTACAGTAGTATTGTATCACTGCATGCTGATTTTTGTTTTCACATGCCCCCTGAATTGACAGTTTTCATTCTTCAGGTTACTTTTGTTGAAGCTCTTGACCAGCTAATGCCTGGTTTTGATCCTGAAATTGCAAAATTAGCCCAGAGAGTCCTTATCAACCCTCGGAATATAGACTATCACACTGGTGTTTTTGCAAGCAAGGTTAACTAGACCTTCTACCTTAGCTTTCTTCATACCGCAGACACATTTCATCATCTCTATGTTAAAATTGTTGATGATTTTTTCTAGATTACTCCAGCAAAGGATGGAAAACCTGTGCAGATTGAGCTCATTGATGCAAAAACAAAGGAACACAAAGAAACCCTCGAGGTAAAAACTACATTTAAACAATCTTTCAGTCCTTGTACATAGTATCTCCAATTGCAGTTTTACTAGCCAACTTTTTGTTAAGATACTTCACTCTTCATATACTCCTATAGCTATATGACTTACTGATTATCAAATGTATGGACAGTTGTCTCTTTTCTATGTAACTTATTGTTGTTTAGTTCATCTGTAGTAAGTTGATACTATAAACATAGTTTTTATTTCTCCATAATGGCTTATGTGGAAGATCTAAAATGTGGCTCTAGGTGGATGCAGCCCTTATAGCCACAGGACGGGCACCATTCACAAAAGGACTTGGCTTGGAAAATGTAAGTACCTGAAGGTTGAAACTGTTTGCTGTCAGAACATTTCCTACAGTTAAGTTTCAAGCATAGTGAATCGGACCCTTTTTTTCTTCAGATCAATGTTGTTACACAGCGTGGTTTTATTCCTGTTGATGAGCGAATGCGAGTCATGGATGCAGATGGCAATGTGGTATGTTGAAACAAATGAATTACCATGCTTTGTTCAGAATAATCCTCTTCCTGGCTTGTATGGGATCTAACATGCCATGCATTTTTATTTGTAGGTTCCGAACTTATATTGCATTGGAGATGCCAATGGTAAACTCATGCTTGCTCATGCTGCCAGTGCACAGGGAATCTCTGGTACATTACAAATCTGTTTAGATTTCATCTTCTTCTATCGCTCCTATGTTGCTTATCGTATAGTTGCCTGATAAGTAATTCCTATGAAAATGTAGTTGTCGAACAAATCTCTGGGAGGGACCACATCCTAAATCATTTAAGCATCCCCGCTGCTTGCTTCACTCATCCAGAAATTAGTATGGTTGGGCTTACAGAGGTAAGTCGGGTGTAATCCCATAAAGCTTTCTTTAGTCTGCCCTGTTTATGCGTTACTTCTTCATCTACTTCTGTTATATTTTCTGTCTTGATATTTAGTCTTATATTTTCTGTCTTGATATTTTGTCTTTTCCTTGACGTAACCAATTCGTTATCCTTTTACTGTATTTGGTATGTGTCCATTGCTTCTTGAAGGGGATCTAAACCATGCAATCTTTATGATTTCCTTGACCAAGTGTTATCAATAAATATTGCAGCCACAAGCCAGAGAAAAAGCTGATAAAGAAGGATTTGAGATAAGTGTTGTTAAGACCAGCTTTAAGGCTAATACAAAAGCATTGGCAGAAAATGAAGGAGATGGACTTGCTAAGGTATACATGTTTTTAGTTTGTGCCACTTATTTCTATCAGTTTTTTTTCCTTGCAGGGTTATTTCTATCAGTTGTGTTGTCTTGTCTCCAAATTGGCACCTGGGTATTGCTGTCTTGCATGGCTTCATTCAGTGACATACTTTGGGCTTGACAATTGTATGTTCCTTTCTGCAGTTGATTTACCGGCCTGACACTGGAGAAATTCTTGGTGTGCACATTTTGGGTTTGCACGCTGCTGACCTCATCCACGAGGCATCAAATGCCATTGCCCTAGGAACTCGGTTGCAAGTGAGTATAATGATATTATTTTTCTTCACTTGGTTCGTCTTTGTTAGCCTTTCAGCAGTATAACTTGAATTTGACATGATCACTCCCACCACGCAGGACATCAAGTTTGCTGTTCATGCACACCCAACATTGTCCGAGGTGCTGGACGAACTCTTTAAAGCAGCCAAGGTACACTTCAGCGCTCCATTTTTCTCTCGTGTTTAGAATCCTTGACCACATTTCTGAACAGCTGCAAGCTATTCTTTTTTTTTTTCCTTCCCAACAGGTTAATTCGGGTGTTTCTCATTCTGTAAATGAACCAGTTGCAGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018775

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018775&oldid=47531"