BGIOSGA018783

From RiceWiki
Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018783| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018783, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018783

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018783, complete gene.

LocusTag

OSJNBA0059G01.12

Ensembl Transcript ID

BGIOSGA018783-TA

Ensembl Protein ID

BGIOSGA018783-PA

Length

5489

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3433722..3439210

Sequence Coding Region

3439024..3439210,3437179..3437348),complement(3436258..3436316,3435189..3435217),complement(3434698..3435106
,3433722..3434187

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3433722..3439210 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3433722..3439210 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTGCGAGGGAGGAGGTGAGGGAGGAGGAGGGGGAGGAGGGGGAGGGGGTGGGCGGGAAGGAGGAGGAGAAGGCGGCGGCCGCGGCCGCGGCGGTGTCGTGCTCGATCTGCCTCGACGCGGTTGTCGCCGCCGGCGGGGAGAGGTCCACGGCGAGGCTGCAGTGTGGCCACGAGTTCCACCTCGATTGCATTGGATCAGCATTTAATGCCAAAGGCGTTATGCAATGCCCCAACTGCCGCAAAATTGAAAAGGGGAACTGGCTCTATGCAAATGGTTCCCGACCCACACAAGATGTTAATATGGATGAGTGGGCTCATGATGAAGACCTTTATGATGTTAGTTACTCGGAGATGCCCTTTCGGTTTCACTGGTGCCCATTTGGTCGTTTGGCTCAACTTCCATCCTTCTTTGAGGAAGGAGAATCATCACCCCCAGTTACTTTTCATGACTTCATGGGACAACATATGTTTACGGAGCATGTAGCTGCTGTATCTGCTGCACCTGGGGCAGCTCATCCATGCCCATATGTGGCATACTTGCATCCTCTTCCATCATTGGCGTCATCATCAAGCTCTCATGTTCCTGAGAGAACTATGGATGGTCCTGCATATCATGATCCCTGGCACCCCTTGGCTGGGCCTTCAGATGGTAGGCCCTTGCAATCAGTGCAACCTGCTGATTTTCATCATAACCATTGGGCGCATGTTCCCAATTCCTATCCTCAACCCAACAACAATAATGGGGTGGCCGAGCAGCAAGGAGTCCCTTTTGGAACAACGAGGGCTGCAAGAGTTGATGGTGATACCCAACGTCGAGGATCATCTATTTCTCCATCATACTTCAGTAATGGATCTGGTTCTAGATCTAGAGCTCCTAATGTTCCTCCTATGGTGCCTCAATTCATGAGGGCGCACGGCAGCATTAGTGAACAGTACCAGCAGAGTTCATCATCCAGCTTATTTGCTGGGGCTCATAGATCAGGAGGCATGCGAACTGCACCGCCGCCCCCTCTACCAGAGAACCCGGCATTTTGCCTTTTCCCACCGGGTTCATCTGGCCATAACTCGATGGAGACTGATGATGCAGGAGGAAACCGATTCTATGCCTGGGAACGGGATCGCTTCGCACCATACCCACTAATGCCAGTGGACTGTGAGACAAACTGGTGGAGTTCACAACAATCTCATGGTACATCAGAACCCGCGCCTGCTCCAAGGAGACTATTTGGGCAATGGATTGGTGTTGGAAGATCATCTCCGGAAAATCGATCACCCGAGGGCTCATCGTATCGGCAAATGCACACCCCAAGGATGTAG</cdnaseq>

Protein Sequence

<aaseq>MGAREEVREEEGEEGEGVGGKEEEKAAAAAAAVSCSICLDAVVAAGGERSTARLQCGHEFHLDCIGSAFNAKGVMQCPNCRKIEKGNWLYANGSRPTQDVNMDEWAHDEDLYDVSYSEMPFRFHWCPFGRLAQLPSFFEEGESSPPVTFHDFMGQHMFTEHVAAVSAAPGAAHPCPYVAYLHPLPSLASSSSSHVPERTMDGPAYHDPWHPLAGPSDGRPLQSVQPADFHHNHWAHVPNSYPQPNNNNGVAEQQGVPFGTTRAARVDGDTQRRGSSISPSYFSNGSGSRSRAPNVPPMVPQFMRAHGSISEQYQQSSSSSLFAGAHRSGGMRTAPPPPLPENPAFCLFPPGSSGHNSMETDDAGGNRFYAWERDRFAPYPLMPVDCETNWWSSQQSHGTSEPAPAPRRLFGQWIGVGRSSPENRSPEGSSYRQMHTPRM</aaseq>

Gene Sequence

<dnaseqindica>1..187#1863..2032#2895..2953#3994..4022#4105..4513#5024..5489#ATGGGTGCGAGGGAGGAGGTGAGGGAGGAGGAGGGGGAGGAGGGGGAGGGGGTGGGCGGGAAGGAGGAGGAGAAGGCGGCGGCCGCGGCCGCGGCGGTGTCGTGCTCGATCTGCCTCGACGCGGTTGTCGCCGCCGGCGGGGAGAGGTCCACGGCGAGGCTGCAGTGTGGCCACGAGTTCCACCTCGGTATGTATGTGGCTATCGGATGATCTACAGATGTGTTATTGGTAGGGAATTGTAAGTTAGAGCACTAGAACTGCGATTTTTTTTGGACTCGCGCTGTCAATTTGATTTGGGTGAGGGTAGCTGTAAAATGTGATGCTTTTGTTAGGAATTGGGGCTGGACTTGGTGGGAATTAAGATAATTTTACGTCTTCTAGCTGTAATGGCTGCAGTATTTTGGGCGATGGTTCGCATAGGTAGTGAGTGCCTTTTGGGGGTAACCATCAATGTTTTCCCCAGTGGGTGGGTGGGTTGGGGGATGAAAGGAAGATTTCGTGCTAAAATTGCTGGTATATAGGGTGAAATAGTCTGGCTGACATGCATCACAAATTTCCGGTACTGGCCTGGTCCGATGACTCGTAGAGTTTGCGGATTTGATCAGATACTATGAAAGAACATCAGAATAGCTTGAGCGGAGTTTCTTGATGGGTTCTTAGTTCAATGGAAGTTATGAAACAAAGCATCGGACCAAATAATTATTTTAGCCAGACAAGGAAATCAAGTAAATCACATCAGTTGGAAATTGATACTAACATGGAAACCAATGGAAGCAAACAGATAGAGCAAATATTGATCTTGAGATTGCGCTTCTCTATACCATGGTAGAGGCAGGTTGGCATGTTGAGCAGATAATAAATTGGCCCCTTAATACAACGATGGACCTATGCACCCACTGGTAACCTTTAAACAGGGCTGGCTTAGTGGACCAATGGTTTGACCCACCCATTTGGACCCCTGGATGAAAGTCTGTTTGGTTCCCAGGAATTTTTGGGGGTTATTGAGCTAGCTGTTCAATTTTAGTGAATGGTTGCACTTTGAAGGCTTGTCTGGAGGATTTAAAAATGTCCCATGGCATGCTTAGACCTAAACTTATAGGAAACTAAGGACGACACAGATTTGAATAGTTCAGTTTGATGGTTTCATTGAGCGTTGAGCCATAGTGACACTGACATACTGTAGTAGATAGGGTTTCCCTCTCTCCTTTTTATGCTGTACAAGGAATTAGGTGCAATCCTGAGAATATGTAGTTAACTGCAATCCTTGTTTCCTACTTTCCTGGAAATTACTCTTAGGTAATATTTTTTGTTGGAAGTCAGAACCATGTTTACATTCTATATATACTTGGTTCATGTTCTTTTACTGGTATCAAGTTTTATCTGGTCTGTTGTTATTTGGTAACAAGTTATCTTGATGGGATTGAGTTTTTGTCTTATAAGCTGTCAGCCGTGACGCATGAGCAAGGCAACAGAAAAATAATTTTAGTGCAGACTTCTATACTTCTACTCTTAGTGGTTAAAAGCCTAAGGCTGAAAAATAGAGAAGGATGGAAAAACATCTAAACTAATTCAAAATTAAGTTTCAAAACTCAAATTTGGCCGCAGCTTATAAGCTGCCGAGCTGCCAACAAGTTAGTATCAAATATGGACTGTCTTTTAGTTATCAAAATCCTTTAGATTTTCTAAGTTAACAAGCCTCAATGATCTTGGATTCACTTATTAACCACCATTGTTTTTTGTGCATTAGCAATGATTTTATTTGCTTTTTACATTTGTTAAGCGTATGATCTTCAAGTGGAAGTTTTGAATTTCTAGTATTTTCATTTATTACAACATTTTGATGATTGTGGCATTGTTTCCAGATTGCATTGGATCAGCATTTAATGCCAAAGGCGTTATGCAATGCCCCAACTGCCGCAAAATTGAAAAGGGGAACTGGCTCTATGCAAATGGTTCCCGACCCACACAAGATGTTAATATGGATGAGTGGGCTCATGATGAAGACCTTTATGATGTTAGTTACTCGGAGATGGTACGCAACCATGTTATCTTTAATTTTTTATTTGTTTTTGTTGTGAATTATCTTTTTCCTTTCTAATCTTTAATTTATTATTTGTTTTTGTTGTGAATTGTCTTTTACCTTTCTTGTTTGCCACATGCTATCCCATCATGTTTTTACTAGTTTACCTGATCATCAATATGGTTTCTTCGACTTGTTCTTTTCTTACAAATGATTCACTTGACTAAACCTTTTCTTTTGGAGACATCTGTGTTGCTACGTGAATATGTCTTCTATGCCGATATTCCCTTCAGATCAAGATCTTTAGTTATGGGCCTCTTGACAGCGGAATTCATTTATAATCGTTCTTATAGGTTGCCACTGGCAGCTTTTGTGAATTGCATTACTGTTGTTTTTCTGTTCTCCAATTTAGTCACTTGAGGCCATGTTCTCTCTGTGAAGAAAACAATATGGGAGTTTTGAACAAGTGCAGTGTGCATTCTTGCAAATGATCTAGATTCTAGTTCTTTTGTCAGTTGAAGGTTAAACTCGAGAGAAGTAATACATTAGAGGTCACAGCTGTTTTTTTATGTGTACACACTATGGTGCATCAGTACTGACTCCTTATTTACTTGAAGTAAATTTGTCATTTTCCCTATTATTATGCTTAACATTGTGCACAAAGTAATAATTCTGAGATGAAAGTTGTCACAGCTTATTCAATCATGCTACACATATGCACTAACTAATTGCATTTTCTAAAAGATTTATGCTACTTACATAGTTGGTTTTCATTATTATTGATTTTTCATTTTCTGTCATCATTTGAGCTTACGGAGGCAGTTACTCTAGATTCTGTTCTGAGTTCTGACAACAATGTATTTGAATTGTGCAGCCCTTTCGGTTTCACTGGTGCCCATTTGGTCGTTTGGCTCAACTTCCATCCTTCTTTGAGTATGTTCTGCAGTCTTCGCTTGAAATTGTGGTTTATCGTTTTATTTCACCTTTCCAATTGTCCAGTTCTATTTCTAGCTCAGCACTATAAGATCTTTCAAGTATAGTAATAATATAAAACACCATTGAATTTGCGGGTAGTGAAAATTGGTCTTATGAGGTACTATAACTAGATGTTGTATTTATGTTGGTCCATTAGCGATGCTATCTATACTCTATACTCCTCAAAAAGATTCCAATGGTGGTGGCATTGAATCTGCCACCCCACCCACTCCTTTTGTAGATTTTACATATTACCCCTTGAACTTTTAATGTTACATAACAACTAAATCTAGGTGGATAGCCACATATACAATTAAATTAAGGTGGGTATTCCCTATAACAAAAAGACGGGTAACATATACATTTCATGAAAAATATGTTATTGCTTATTTTAGGCAATATTATGAAAATATTCTTTTATCTATCCATAGCAAAGCATATGGGTATTTAGCTAGTGTTTTGAAAAATTAATAAGCAAATGAGTTAACTCTAGGACCTGTAATATCAACAATCTGTTTTAGGGATGGATGAATATAAGGTGAATGGCCTTTCAATTCTCGGTGATGAAGTGCGGAACAATATACATTTTTTCTTAGGTTTAGTCCTATCATGATGCATTTGGTTTTTGACAATCTCCGTGCTAGTTCTCTTTCCATGAGACTCTAACTCTACTTTGCATGGATCTTCTGACAAGCCACTGTCTATTGCTTGTATATACCAATATGTCAGTATACCATTTGACCAAAGTGCTGATCAGACTACTGGTGACAGCATTAATGATGATACCATTAAGCCATATTGTCTTTCCCGATACCGATTGCAGTCAGTGAACATATCAATTCTTTAAGTTCTATCTTTTGCTGCACCCTTCTCTTAACACCAACTATTGTCTGTGCAAAATCTATGGCACGCTATATTAAAAGTTTCAGAGTTTCATTGTTTGAAATTGGTGCTATGTAATATTATGTTCCTCACTTAATGTTCCCCTCTTTTGCCAGGGAAGGAGAATCATCACCCCCAGTTACTTGTAAGTTCTTATTTAAATGGGATCATTTTGTAAAACAATAGCTATATTGAGTTTGAAATATGTCTTGATATTGGCCATGCAGTTCATGACTTCATGGGACAACATATGTTTACGGAGCATGTAGCTGCTGTATCTGCTGCACCTGGGGCAGCTCATCCATGCCCATATGTGGCATACTTGCATCCTCTTCCATCATTGGCGTCATCATCAAGCTCTCATGTTCCTGAGAGAACTATGGATGGTCCTGCATATCATGATCCCTGGCACCCCTTGGCTGGGCCTTCAGATGGTAGGCCCTTGCAATCAGTGCAACCTGCTGATTTTCATCATAACCATTGGGCGCATGTTCCCAATTCCTATCCTCAACCCAACAACAATAATGGGGTGGCCGAGCAGCAAGGAGTCCCTTTTGGAACAACGAGGGCTGCAAGAGTTGATGGTGATACCCAACGTCGAGGATCATCTATTTCTCCATCATACTTCAGTAATGGGTAATTACTTATTCATTTCTGCTCAATCTACTAATTTGTCCTTGTTTTTGTTGCCATGTACTTTATCAGAACACATATCAGATTAGTAAAATCATTAAACAATGGAAAATTGTGTTGGGTACCAAAAAAGACATTGTACGCATCCGTGTCCTATTCTGCTACCATTTTTACCAATACTGTTTGTCCACGTTTCCTTTGCTGGTTTTATCATGCTCTGTTTTAACCTGATGCTATAACAACTTTCACAAATACAATTTTGTATTTTTGTTTATGCTATAACAAAAAAAATGGGAACCTGATGGTGAAATCAATAATAAGCTTGTAAGCATGAGTGTCAGGCTAAGATCTTATACAGGCAAGAATAAATTCCTAAAATTACTTCAAATTCAAAATCTTCTTTTATAGAAGAGACTATTGCATTATTATGCAGCTTCTGATTTTCATAAAAATGCAGCTTCTGATTCTTCAATGATGAATATGTAGTTATGACTACCTTTTTTTTTTTTGCAGATCTGGTTCTAGATCTAGAGCTCCTAATGTTCCTCCTATGGTGCCTCAATTCATGAGGGCGCACGGCAGCATTAGTGAACAGTACCAGCAGAGTTCATCATCCAGCTTATTTGCTGGGGCTCATAGATCAGGAGGCATGCGAACTGCACCGCCGCCCCCTCTACCAGAGAACCCGGCATTTTGCCTTTTCCCACCGGGTTCATCTGGCCATAACTCGATGGAGACTGATGATGCAGGAGGAAACCGATTCTATGCCTGGGAACGGGATCGCTTCGCACCATACCCACTAATGCCAGTGGACTGTGAGACAAACTGGTGGAGTTCACAACAATCTCATGGTACATCAGAACCCGCGCCTGCTCCAAGGAGACTATTTGGGCAATGGATTGGTGTTGGAAGATCATCTCCGGAAAATCGATCACCCGAGGGCTCATCGTATCGGCAAATGCACACCCCAAGGATGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018783