BGIOSGA018784

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Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018784| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018784, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018784

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018784, complete gene.

LocusTag

OSJNBA0059G01.11

Ensembl Transcript ID

BGIOSGA018784-TA

Ensembl Protein ID

BGIOSGA018784-PA

Length

6396

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3425212..3431607

Sequence Coding Region

3431423..3431607,3430428..3430719),complement(3430116..3430252,3429752..3429850),complement(3429165..3429285
,3428795..3429067),complement(3428569..3428649,3428403..3428486),complement(3428188..3428274
,3427881..3427936),complement(3427597..3427782,3427207..3427432),complement(3426611..3426699
,3426191..3426344),complement(3425959..3426081,3425573..3425630),complement(3425212..3425249

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3425212..3431607 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3425212..3431607 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTGCACGAGCTCCTCCTCGCGCTGCTCGGCTTCACCGGCGACTTCGTCCTCGACGCCGCCTCCTCCCCGTCGGCCACCCGCCGCCGCCGCCCTGTTCCCCCGGAGGCCGCCGCCGGCGGCGACGTGGGCCCCGCCTCCTTCCGCCTCGCCCCCGACCTCACCTTCCTGCAGCCGTCCGAGAGGAGTGCTATTGAAAGGCTCATATCCTTGGGCTTTTACTACAGAGAACTAAATCGCTTTGCAACTGAGTCTCGTGACCTGAGCTGGATCAATTCTCCTATAGATGTTTCACCAACTCATGGTGAGAAAACTGTGAAGGCTAAAGTGAGAAAAGGGAGTGCATACAGGAGAGCGATTGCCAATGGTATTGCTGAGATTTTGTCAGTTTATAGATCAGCTGTTCTGCAGGTTGAGCAAAACCTGTTGTCAGATCCTTTGCCTATCCTGGCAACGGTAACTCATGGGCTAAATAAGTTTGAAGTTCTCCTGCCTCCGCTCCATGAACTTGTTATGGAAATTGAGCAGAAAGACATCAAAGGAGGACAACTTCTTAACCTTTTGCATAAACGATGCCATTGTGGTGTTCCAGAACTGCAAAGCTGTATTCAAAGACTTCTTTGGCATGGACACCAAGTCATGTTTAACCAGCTGACATCTTGGATGGTTTACGGGATCCTTCAAGATCAATACAATGAATTTTTCATTAGAAGACAGGAAGACAGGGACGAGGAGAATGATTCATCTCAGGTGGACGTTGCTGATAAGTTTACGCAGAAATCAGCTAAAGAGACATCCCTGACTAGTTGGCACACAGGATTTCATGTATCTTTGGATATGCTACCTGAGTATATCCACATGCGAGTTGCAGAATCGATCCTCTTTGCTGGCAAAGCAATAAGGGTTCTTCGAAATCCTAGTCCTGGTGCTACCTTGCAGGAATCCATGAACCAAAGTCAGAATGTGAAAGGATCTTATAGAATGCAAAGTCTCATAGGAGGTTCAGGTGCTCTAAAAGAGCTACCAAACTTCCCTAACATAAGTGCAGAAGAATTGTTGCCACAGGCTGAAGCAGATAAAATTGATGCCATGCTCAAGGAGCTAAAGCATTCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCAATACGAACAATGGCAGCTAATCATCTCTGGCAGCTAGTGGTTGTACGTGCTGATCTTAATGGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGTGTTTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCAGATCTCATGGTCCCATTTCAATTGGCTGCACTGAAGACTATAGGTGATGAGGACAAATATTTTGCTAGAGTCTCATTAAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAAGATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTGGCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTTTTCTTTACTCCTGATGTTGTGTCCAAGTATCGCAAGGTTTTCCAGTATCTCATCCGATTGAAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTATTTGTCAGCACTAATTTCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTCTGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATTGATCACATAACTGAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGCAGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGCTACGGCCAAGCACTGCAGATGTAGATCAGCTTGTCAACGAAGTAGAGCACAATTAA</cdnaseq>

Protein Sequence

<aaseq>MLHELLLALLGFTGDFVLDAASSPSATRRRRPVPPEAAAGGDVGPASFRLAPDLTFLQPSERSAIERLISLGFYYRELNRFATESRDLSWINSPIDVSPTHGEKTVKAKVRKGSAYRRAIANGIAEILSVYRSAVLQVEQNLLSDPLPILATVTHGLNKFEVLLPPLHELVMEIEQKDIKGGQLLNLLHKRCHCGVPELQSCIQRLLWHGHQVMFNQLTSWMVYGILQDQYNEFFIRRQEDRDEENDSSQVDVADKFTQKSAKETSLTSWHTGFHVSLDMLPEYIHMRVAESILFAGKAIRVLRNPSPGATLQESMNQSQNVKGSYRMQSLIGGSGALKELPNFPNISAEELLPQAEADKIDAMLKELKHSSEFHKRLFESAVGSIRTMAANHLWQLVVVRADLNGHLKALKDYFLLAKGDFFQCFLEESRQLMRLPPRQSTAEADLMVPFQLAALKTIGDEDKYFARVSLRMSSFGIKASTSQKDLQKSSTPEISSQGKATSELALDGWDSIALEYSVDWPLQLFFTPDVVSKYRKVFQYLIRLKRTQMELEKSWAAVMHQDHADFSDYCKDRKNGDATQLRRQRSKPFWRVREHMAFLIRNLQFYIQVDVIESQWNVLQAHVQDSHDFTELVTFHQEYLSALISQSFLDIGSVSRILDSIMKLCLQFCWSIEQYENRRNMLEIDHITEEFNKKSNSLYTILRSSRLAGSQRAPFLRQFLMRLNYNSFFETTARGVMNSAGGRLRPSTADVDQLVNEVEHN</aaseq>

Gene Sequence

<dnaseqindica>1..185#889..1180#1356..1492#1758..1856#2323..2443#2541..2813#2959..3039#3122..3205#3334..3420#3672..3727#3826..4011#4176..4401#4909..4997#5264..5417#5527..5649#5978..6035#6359..6396#ATGCTGCACGAGCTCCTCCTCGCGCTGCTCGGCTTCACCGGCGACTTCGTCCTCGACGCCGCCTCCTCCCCGTCGGCCACCCGCCGCCGCCGCCCTGTTCCCCCGGAGGCCGCCGCCGGCGGCGACGTGGGCCCCGCCTCCTTCCGCCTCGCCCCCGACCTCACCTTCCTGCAGCCGTCCGAGAGGTACGGGATCCCTGCGGCCTTGTGTGTTTAGGCTGTAGCTGGGTGATTGTGAATCCGGGAGGGGAAGGGATCTGCGATGGAGGTTAGTTAGGTGGTCGAATCAGACATTTTGGATGCGGGTACCGACGAACAGGGGAAATTGGGGAATTTCGCGTTTGGGGATGATGTGTAGTGCTTGCCTACGCGCAATTTGCTTCTGTGCTTCAGTGATTGTCTGATTGATAGCTGCTGCCATTGAATTTAAATGCGCTCTTCATTGCCCTTCAAGCATTGTTACCGCTGTAAACCCGACAAGAGCATGCTGTTTCTTCAGATTTCATGTAATGTACAAACTAAAAGGAGCAATGCAATGACGGTGCATGTAATGTACAAACCAGGGAACAGCCTTACAAGACTGGAGCAGTTGAACATCCTAGAAATGTAGTCTCAGACAAGAGACCAACTTACAAAGTTGGTTTGGGATGAGTTTCCTGGAAATGTACCATTGTAGACCAAGCATATATACAACTTCCTCCTTACATGTGTTGGGCTATGAGTACTTGACATTAGTTAGGAAACATCAAAGAACACACTTTAAAAGAAAGAATGTACAGATACAATTTGACTAAATTTTACATTACCTCCTTCCAACGCTTTATAGGAATCTGCGTTGTGCTATTTTCGTGTGACTGACCAAATTCTAAATGGCTCGGCATATTTGCAGGAGTGCTATTGAAAGGCTCATATCCTTGGGCTTTTACTACAGAGAACTAAATCGCTTTGCAACTGAGTCTCGTGACCTGAGCTGGATCAATTCTCCTATAGATGTTTCACCAACTCATGGTGAGAAAACTGTGAAGGCTAAAGTGAGAAAAGGGAGTGCATACAGGAGAGCGATTGCCAATGGTATTGCTGAGATTTTGTCAGTTTATAGATCAGCTGTTCTGCAGGTTGAGCAAAACCTGTTGTCAGATCCTTTGCCTATCCTGGCAACGGTAACTCATGGGCTAAATAAGGTTTGTTATTTAAGTAGTTCATTTAATGTTTCTGTATGCAAATATCATTATCTAATTCTCGTATAACCATATACTATACTTATAAATATCATTATCTAATTCTCCTATAACCATATACTATACTTATCCATTGCAAAATTTGTCAATCACTGAGACTTGTTGAATTACATTGTAGTTTGAAGTTCTCCTGCCTCCGCTCCATGAACTTGTTATGGAAATTGAGCAGAAAGACATCAAAGGAGGACAACTTCTTAACCTTTTGCATAAACGATGCCATTGTGGTGTTCCAGAACTGCAAAGCTGTATTCAAAGGTATTAATTTGGTTAGTTTTCACCAGTAACTATTTAAGAAAGAAAATTTTTATCCCATTCTTTCATGCTTGCATGGGAACTTTTGTATTTTTATCTCCTATGCAACTAATCCTCCCAATATATCCCTTGTTTTCCTATAAAAGATGTCTCTTCATACTATATTGATGTTGTGCATTTTTTTCCTTGCGAATTCTCCGTGTACCCTGAAAGTACCTAAATGCTGTATCTTTCTTGTTTGTTTCCTTTTCATTGATCGGGAACACAGACTTCTTTGGCATGGACACCAAGTCATGTTTAACCAGCTGACATCTTGGATGGTTTACGGGATCCTTCAAGATCAATACAATGAATTTTTCATTAGAAGGTCAGCATGCCTTACATATCTTGAATTAAATTATCCTGTTCTTCACTCCTTTGTTCTATTCCTGCTTCTGATCTATTACTGTCATATATCCATTTTTCCGTTATGGCCTTCTAAATTGTAATGGAATATTTGAATCAGAGATGCACAATCTGTAAGCACCTTTAAGTTTTGGTTATAACATAGGACATTTCAATCTATTTGATACAGCTTGATTCACATATGCTTACCTTCTCTATTTCTTTCCTCAGATCTGTTTCGTTTGTTCTCTTAAGTACAGACTCCTAAATATTTAGTCTAATACTGTGAAATTGAGGGATAATAACTTCTGTCTAGATGATCTCCATTCAAATCCTTAAATCCCGTATTCTATGGTGGGAATTAAATTAGTTAGTATTCAAAATAGTTAGTATTAACTGCTGAGCCATAATGCCATTCTGCAATACAAACTTATTGCCTTCCTTTTCAGACAGGAAGACAGGGACGAGGAGAATGATTCATCTCAGGTGGACGTTGCTGATAAGTTTACGCAGAAATCAGCTAAAGAGACATCCCTGACTAGTTGGCACACAGGATTTCATGTATCTTTGGTATGTGGTATTACAAAGTTTGTGGATATGAGGTATTTGTTGTTAGGATGGTGGTCATAATCTGATGGTTATTGTTTTTGTTTTCTTCACTCGACAGGATATGCTACCTGAGTATATCCACATGCGAGTTGCAGAATCGATCCTCTTTGCTGGCAAAGCAATAAGGGTTCTTCGAAATCCTAGTCCTGGTGCTACCTTGCAGGAATCCATGAACCAAAGTCAGAATGTGAAAGGATCTTATAGAATGCAAAGTCTCATAGGAGGTTCAGGTGCTCTAAAAGAGCTACCAAACTTCCCTAACATAAGTGCAGAAGAATTGTTGCCACAGGCTGAAGCAGATAAAATTGATGCCATGCTCAAGGAGCTAAAGGTAGCTTTCAACTGCCTGCTGGCATTATTATAAACCATATTATTTTCTTGCAAGCTCTTTTGTTTTACTCAAACATTTAGCTTTTGTTCTTGCTTTTTACAAGAGCAATGCTCATATGGCCAAATGACCTTTTCTGTTTTTGTAGCATTCTTCAGAATTTCATAAAAGGCTGTTTGAGTCTGCTGTCGGCTCAATACGAACAATGGCAGCTAATCATCTCTGGCAGGTACTGGATGGCTTAAAGCATTCTGTGTTTTATCACTGTTACATAACAAAGTAGCATAACCTGTTGTTTCCTTTGGTAAAAGCTAGTGGTTGTACGTGCTGATCTTAATGGTCACTTGAAGGCATTGAAAGATTATTTTCTTTTAGCGAAAGGTGATTTTTTCCAGGTAGGCATGCACTTCCCACGAAGCATCTTTTCAATTCTCTCACAAGTTCTCCATTGTTGCATTACAATGCAAATCTTTCTCTTTAGTTGCTTTATGAGTTCATACATTGTGACCATATTCCTGAGCAGTGTTTTCTTGAGGAAAGCCGTCAATTAATGCGCCTACCACCTCGCCAATCTACAGCTGAAGCAGATCTCATGGTCCCATTTCAATTGGTAACTAACATATTCCTTTTGTGTTCTAGCAGACTTGATGAAATTCAATCTTATGTGTTATCACTTTACTACATATGAGTTTTCACCAACTTATATATTGCAGACCTGTTTTTATTCTCTTATCTGATATAATTCCTCATGTCAGTGAATAGATCTTATTTTTGTTCTCTTATATGCTACGGTACCTCATGCTAGTAAATAGATTTGACTTTTGCAGCCATGATGTATTTTCCTGTTATTAATTCCCTCAGGCTGCACTGAAGACTATAGGTGATGAGGACAAATATTTTGCTAGAGTCTCATTAAGGTTGACATCTCTTTCTACCTCTTAGTAATTCATTTCAGGCCTTGTCTAGTGATTGTTAATTCTGCATATTGTAAACTAGTTATGTTTTTTCATTGTAGAATGTCATCGTTTGGTATAAAAGCTAGTACCTCACAGAAAGATCTACAAAAGTCCAGTACTCCTGAGATTTCCTCGCAAGGAAAGGCTACCTCAGAATTGGCACTTGATGGGTGGGATAGTATTGCTCTGGAATATTCTGTTGATTGGCCCCTGCAGCTTTTCTTTACTCCTGATGTTGTGTCCAAGTACGTGTGGTTTCATATCTCGACTAAATAAGCTCTTGTGAATTCCCTATTCTTGCAGTGTGAATTTACTTCTGAGAGTTACAACATGACTCATGCTATTCAGATATGGAAGTGAGGACCATATGCATTACTTTCTCTGTCTTAAATATGTAAACCTCATACAGGTATCGCAAGGTTTTCCAGTATCTCATCCGATTGAAGAGGACACAAATGGAACTTGAGAAATCCTGGGCAGCTGTAATGCATCAAGACCATGCTGATTTTTCTGATTATTGCAAGGATCGGAAAAATGGCGATGCAACACAACTGCGCCGGCAACGCTCTAAGCCATTTTGGCGGGTAAGGGAGCACATGGCTTTCCTGATCAGAAACCTACAGTTTTATATTCAGGTAATAACCGGTTAGACGTTCTCTATATCATATTTCTTTTCTAATTCCAAATGCCACTCTTATGTCTGTACATAAAGCTTTCTGACGTATGATTTTCTTGTCATCTAACCTTAGGCTTGAAGCATTGTACTTTTCATGTTATTTGGATCCTGGGCTAGGTGTTTTTTTTAATTGTTCTGGAACTATTGGCCCCACTGAAATCCTTAATTCAAATCCAAAAATTGAGATTTTGGTTAGTAACCAGGTGGTAACTGTTTGCCAGTCAGTTACCATCCATAAGTTTTTCATAATTAAATTTTGAATTTGATTTCATAGCCTTATGGCCGGTAAAACCTCCTAACCGGTCATAGCCCTAGACTAAACTGGCCGGTTATCACAGGTTTTTGGAACCTTGATCCTGGGAATACACTTTCTTTTTTCTGCCTTTTTTTTGTTACTCCAATGACATTTGGTTAGTTTGGTAATTTCTTTTTTTTTTCTTTTCCATATATTGGACTTGCTTTGCAGGTTGATGTAATTGAGTCACAGTGGAATGTTTTACAAGCTCACGTGCAAGATTCACATGATTTCACAGAACTAGTGACCTTTCATCAAGAGTAAGCAAACCATTTTTCACTTTTTCCTCTATAAAATAAATTCCATCTTTTATTTGAAGGAATAATTACATTTGCTGGTAATTTGTGTCAACGAACTAAGTATGAGTCAGTTGACCCCAACTGTTTAGGAAAGCTTTGCTATCTGTTGTAGTTTTGTTTACTTGCTAGTTTCCACATAGAATTGCAGTATTCAAAGTGTTGTACAGACAAGTAAAAAAAGAAAGATCTGTAAATATCTTGGCTGATTATCACATCCTGAACTGCAGGTATTTGTCAGCACTAATTTCGCAATCCTTCTTGGATATTGGATCGGTGTCTAGAATACTAGACAGCATAATGAAGCTCTGTTTGCAGTTCTGCTGGAGTATCGAACAATACGAGAACAGGAGAAACATGCTTGAGATTGATCACATAACTGAGGTATCATCCTACCTTTTTTGCCATTCCTAGACAGACAGGAGCATTTGTTTTGGTCTCATAGTTCTCTGGAAAGTCTCAATACCTATTCGCTTGGTTTTGATGATAACAGGAGTTCAACAAGAAGTCGAATTCGCTGTACACTATCTTAAGGAGCAGTCGGCTTGCAGGGAGTCAGAGAGCGCCTTTCCTGAGGCAGTTTCTGATGAGGCTAAATTACAACTCTTTCTTCGAGGTAAGCCAATCACACCAATTTGCATCCTGTAAGGTATCCCCTCCGTCCCACTTACTAAGGCGTGGTTAAACTCGGCAAAGTTTTCAAAACTAATCTTTAACTTTAAATTTCTCATATACTACAATGATTACAGAAACAAAATTATAATATTATTTTCATAAAAGATAATTTATAATAATTTTTTTATTGGTTGAATATTTAAAGAGTTGAATTTTAAAATGCGCGTGCGCCTAGTAAGTGGGACGGAGGGTGTTCACGTGTATTTCTGTTTTTCTTTTTAAAATCAGAACATTTCTTTTAACTTTGCTGATTTTCCTTCGAATCGTAGACCACTGCTAGGGGGGTGATGAATTCTGCAGGCGGTAGGCTACGGCCAAGCACTGCAGGTACCCAGCTGTAACCATCATCGTTCTAAGAAGCGCCTTTTCTTTCTGGTTTGTGATTTTACACGAAGGGGGAGAATTTGTAGCTGATGTAAATCATGACACTAGCATCTTAATGGAAGTTTGCCCTGTAAAGTGAGTGCTAGATTATGGTTGTTTTGTGCTGATGGTGTGTGATTGTGCTAGCTTGTCTACATTTCTCGCTTTGTCATCTGCTAATGCCAGCTTTTTCAACCTTTGAGCGTTGGATTAAGCCATTGGACGCCATCAGATCGTGTCCTTGGGTAAATTATGGGTGTTAACCTGGGTTAACTACAATTAACCAGATGTAGATCAGCTTGTCAACGAAGTAGAGCACAATTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018784