BGIOSGA018787

From RiceWiki
Revision as of 02:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018787| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018787, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018787

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018787, complete gene.

LocusTag

OSJNBA0072C16.18

Ensembl Transcript ID

BGIOSGA018787-TA

Ensembl Protein ID

BGIOSGA018787-PA

Length

4429

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3309859..3314287

Sequence Coding Region

3313921..3314287,3312611..3312909),complement(3311053..3311086,3309859..3310754

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3309859..3314287 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3309859..3314287 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGATGGCCGGCGGTGGCGGTGCGGCGGCGGCGGCGAATGCGAAGAAGAAGAAGAAGATGGGGGAGGAGAAGCTGATCATAATGTCGGAGAAGGTGAGGTTCATCGACATCCTGTCGCTGCTGCTCCTCCGGCGGCCGATCACCAGCTACCACTTCGTGGACGCCGGCGACGCGACCGCCGCCGCTGCCGGCGAGCTGGGCAGCACGCCGGGGGAGTGGCTGGTCGCCCTCACCGAGATAATCCAGAAGGCGCTCGCCGCCGCATACTACCCGGCCAAGTACCTCGGCGCCGCCGTCGAGTTCTTCCTCAACTTCGTCTCCCTCAACGGCGGCGTCATCGGCATCCTCTGGAACATCGTCCGATTTAAACTGGTGATCCCACTGAACCGGGAGGCGCCAAACTTCCGGTCCATGATCGCCATGATCGACGGGAGGACGGAGCTGAAGCCGATGAAGCCGGCCGCCACCGCCGGAGTCGAGGACGACGACTTGGAGAGCGGCGGGTGCGCCGCCGCCGGCGTGCCGCTCATCCGGCGGCACCTCGTCGACGGCGAGCACCTCCTCGCCGAACAGTACAGCATCTCCGAGGTCACCGTCATGGCCTCCAAGATCGCCTATGAGAACGCCGCCTACATCGAGAACGTCGTCAACAATGTCTGGAAGTTTAATTTCGTGGGCTTCTACAGCTGCTGGAACAAGTTCATCGGGTCGGAGACGACGCAAGCGTTCGTGATGACGGAGCGCGCCACGGACGCGGCGGCGATCGTGGTGGCGTTCCGTGGCACGGAGCCGTTCAACATGCAGGACTGGTCCACCGACGTCAACCTCTCCTGGCTCGGCATGGCCGCCATGGGCCACGTCCATGTCGGCTTCCTCAAGGCGCTCGGCCTCCAGGAGGTGGACGCCAAGGACGCCGCCCGCGCCTTCCCGCGCGAGCCCCCCGCCGCCGCCGCCCTCGTCGGCAGGTCCTTCGCTTACTACAAGCTCCGCGACGTGCTCCGCGACCAGCTCAGGCGCCACCCCAACGCCCGCGTCGTCGTCACGGGCCACAGCCTCGGCGGCGCGCTCGCCGCCGCGTTCCCGGCGCTCCTCGCATTCCACGGCGAGGCCGACGTCGTGTCCCGCATCGCCGCTGTCCACACCTACGGCCAGCCCCGCGTCGGCGACGCCACGTTCGCCGGCTTCCTCGCCGCCAACGCGGCGACCCCGGTCGCGTTCCAGCGCGTGGTCTACCGGTACGACATCGTGCCGAGGGTGCCGTTCGACGTGCCGCCGGTGGCGGACTTCAGGCACGGCGGGACGTGCGTGTACTACGACGGGTGGTACGCCGGGAGGACGCTCGCCGCCGGCGAGGACGCGCCGAACAAGAACTACTTCAACCCCAAGTACATCGTGTCCATGTACGGCAACGCGTGGGGTGACCTGTTCAAGGCCATGTTCTTGTGGGCGAAAGAGGGGAAGGACTACCGGGAGGGCCCCGTGTCCATCGTCTACCGCGCCGCCGGCCTCCTCTTCCCCGGCCTCGCCTCCCATAGCCCTCGTGACTATGTCAATGCCATCCGCCTCGGCCACGTCGCGTCCAAGGAAGCTTAG</cdnaseq>

Protein Sequence

<aaseq>MTMAGGGGAAAAANAKKKKKMGEEKLIIMSEKVRFIDILSLLLLRRPITSYHFVDAGDATAAAAGELGSTPGEWLVALTEIIQKALAAAYYPAKYLGAAVEFFLNFVSLNGGVIGILWNIVRFKLVIPLNREAPNFRSMIAMIDGRTELKPMKPAATAGVEDDDLESGGCAAAGVPLIRRHLVDGEHLLAEQYSISEVTVMASKIAYENAAYIENVVNNVWKFNFVGFYSCWNKFIGSETTQAFVMTERATDAAAIVVAFRGTEPFNMQDWSTDVNLSWLGMAAMGHVHVGFLKALGLQEVDAKDAARAFPREPPAAAALVGRSFAYYKLRDVLRDQLRRHPNARVVVTGHSLGGALAAAFPALLAFHGEADVVSRIAAVHTYGQPRVGDATFAGFLAANAATPVAFQRVVYRYDIVPRVPFDVPPVADFRHGGTCVYYDGWYAGRTLAAGEDAPNKNYFNPKYIVSMYGNAWGDLFKAMFLWAKEGKDYREGPVSIVYRAAGLLFPGLASHSPRDYVNAIRLGHVASKEA</aaseq>

Gene Sequence

<dnaseqindica>1..367#1379..1677#3202..3235#3534..4429#ATGACGATGGCCGGCGGTGGCGGTGCGGCGGCGGCGGCGAATGCGAAGAAGAAGAAGAAGATGGGGGAGGAGAAGCTGATCATAATGTCGGAGAAGGTGAGGTTCATCGACATCCTGTCGCTGCTGCTCCTCCGGCGGCCGATCACCAGCTACCACTTCGTGGACGCCGGCGACGCGACCGCCGCCGCTGCCGGCGAGCTGGGCAGCACGCCGGGGGAGTGGCTGGTCGCCCTCACCGAGATAATCCAGAAGGCGCTCGCCGCCGCATACTACCCGGCCAAGTACCTCGGCGCCGCCGTCGAGTTCTTCCTCAACTTCGTCTCCCTCAACGGCGGCGTCATCGGCATCCTCTGGAACATCGTCCGATGTACGTGCGTCGCCGTCGATCGCCGCCGGTGATCTATCCATCGATCGGTTTTGGTTCATCAGTTCATGCATGCACGCATTATTTGCACTGCATATGTATCACACATGCATGCATAAATTAACGTCCATACTATATAATTAGTTATTCATTTTTCATCGTGGTTAATTATATACTTCATTCCAACGTACATAAATGCATGGATATATGCCACAATAAATATGAATTGATACATATCATGGACCGAAATGGCCAAATGGGTAATTGAATTAAGTGCAAATGTACACATGTAAAAAATGCTTAATTTTTCATAATTTGACTTGTGAAAACGTAATGTTATATATACGTAAATTTATTACCAACGGAGGAAGTACAAATTCATGAACGCCAAGATGGACGTAATTAACTTTATTACACGTATGGATCGAGGAGAAAATTAACACAGATGATTATTGCTGAATATGCATGCTGCTGTGAAAGAGTTGACGTAAAATGTGGCACGTGAGGTAAGTCTGCCTACAAATTAAAAGGATGAGGACCTCTCTCTCCCTCTCTCGTGTGTGTGTGTGTGTCAGACTGTCAGTGTGTGAGTTGTTGTTCTATTTATGATCCACTTCAAAGGTTTTTATGATACTTTGTATAAACTAATTAATGCCATGTTAACATAATAATTTCTTACTAATTAACTAAAACTATAAGGAAGCTGACAGAAAGCATAATATATTTTTGTCTTATCTTCCAGTTTTGGATCACCAGGTTTATTTTCTTGTTAAGCTAACGACAACTTGAACATTGTTTTTCTTTTTCCAAAGGAAGCACAACTTGAATAAGTTCAATTATATACTACTATCACCTACCAATTGCAAGAAGCTTCTAACCAAACAGTTGAATCAAATTATCAATCACAATTTGCTCATCACTTAAATTAATATTGGAAGCATGCATGCATGACTAAATAATTCAAACAAACCAATTAATTAAACGTGTGTAATTAATTAACTAAGTAATCGGCAGTTAAACTGGTGATCCCACTGAACCGGGAGGCGCCAAACTTCCGGTCCATGATCGCCATGATCGACGGGAGGACGGAGCTGAAGCCGATGAAGCCGGCCGCCACCGCCGGAGTCGAGGACGACGACTTGGAGAGCGGCGGGTGCGCCGCCGCCGGCGTGCCGCTCATCCGGCGGCACCTCGTCGACGGCGAGCACCTCCTCGCCGAACAGTACAGCATCTCCGAGGTCACCGTCATGGCCTCCAAGATCGCCTATGAGAACGCCGCCTACATCGAGAACGTCGTCAACAATGTCTGGAAGGTATATATATATATACTCCCTCCGTCCCCTAATATAAAGGATTTTGACATTTTGCTTATACTATTTGACCACTCGTCTTATTAAAAAAATTGTGTAAATATAAAAAACGAAAAATTGTGCTTAAAGTACTTTGGATAATAAAGTAAGTCACAAATAAAATAAGTAATAATTTTAAATTTTTTAATAAGAAAAATGGTCAAACAGTATAAGCAAAATATCAAAATCCCTTATATTAGGAAAATGAGGGAGTACATACTTATACTCATACAGACGCACACTCACTTTTATTAACTCACACGCTTTTAATTATCTATGTGTATATATATGAACATCTATGATGGACTGAACCTATATATGTTTTTTATATTGATGAAGTTAACGGACACGTTGCCTTAATTTGTTTCTTAATTTTCTTAAAACTTAGCCACAAAATGTTCTTGAATGATTTGCTCGATTTGATTTTAAAAGTTAGCAATGCCGGCCGATCGTCCAAAATATTTCAGATCTAGCCACTTTAATGAGCGTGGCCAACCAAAAGCATATTATTATTCTGCATATACAGTATTCACATAAAAATAAAAAAAATACTCCCTCCGTATTTTAATATATGACGCCGTTGACTTTTTGACCAACATTTGACCATTCGTTTTATTCAAAAAATTTGTACAAATATAAAAATATTTATGTCATACTTAAAGAACATTCGATGATGAATCAAATCACAATAAAATAAATGATAATTACATAAATTTTTTGAATAAGACAAATGGTCAAACGTTGAATAAAAAATCAATGATGTCATTAATTAAAATATGGAGGTAGTATATGATCTTCAAAACAGTTGTGAAATAATTTGTTGTGCAGAACTGCACGATCGACGATGGTGTAACAAAGAGTCAAGGACACATTGTGAATTATTTTGGGACAAGTACACATGTTATACTCCATTCATGTGCTTGTGATGGAGATTGATCATGCATGTTCATGGATTTTAGCTAATGTACATATGTGTGACACAAGTAGTACTTCCGTTTTTTTTCCGACAATGAAACATATATACTCCTACGTAATTTGTATCTTCATCAAAAGGGAGAATACACAAATGCTCAGTGTGCACAAGTAATTAATTGGTTATAAATACATATTTATGATACAAAAGTTTATTTGCTCATCTTAAAAGAAAATAGTTAATATATAAGGTGGGGACAAATATACTTTGGCCTTAAAATAAAATGCATTAAATTAAACCTAGCCCACACCTAATATGTCAATTCATATCTATTCTTCATTTTATATTTATGATCCTGTTTTGTGCTGGAACAGATCGATTTCTTTTTGTGTGCATGTGTGCGAGCATGCTGGAATTAATAGATTTGTTCCACCCAAAAATTAATTATTAATCACTTTGCTGCAAGATTTATAAACTTCTGTTGATATTTCAAGGAATTTTAATTATTTGTTTTAAGAACTGATGAGCACTGAATCTGACTGGTGTTTAATTTGGAATATGAATGTATCATGCAGTTTAATTTCGTGGGCTTCTACAGCTGCTGGAACAGTAAGTTAATTATTCCTCCATGCTCAATTAATTCAATGCATCAACAATTTCGTCACGAAATTGCTTACATATTCACCTGAAAATTACTATCAAAAATTAAATTGAAATTACTAACCAATAAAACAGCAACTAATTCGATCATCAAAGACCAGAGATGTAAACCATTTTAAAAAAAAAAGAATAATTACTACTCTAGCATCGTCCAAATTCATATAGATGTCAATGAATCTAAACACGTATATGTGAAACGGAGGAAGTACTAATTTGGTCGTCGCCGGCAATGGCGGGCGTGGTGCAGAGTTCATCGGGTCGGAGACGACGCAAGCGTTCGTGATGACGGAGCGCGCCACGGACGCGGCGGCGATCGTGGTGGCGTTCCGTGGCACGGAGCCGTTCAACATGCAGGACTGGTCCACCGACGTCAACCTCTCCTGGCTCGGCATGGCCGCCATGGGCCACGTCCATGTCGGCTTCCTCAAGGCGCTCGGCCTCCAGGAGGTGGACGCCAAGGACGCCGCCCGCGCCTTCCCGCGCGAGCCCCCCGCCGCCGCCGCCCTCGTCGGCAGGTCCTTCGCTTACTACAAGCTCCGCGACGTGCTCCGCGACCAGCTCAGGCGCCACCCCAACGCCCGCGTCGTCGTCACGGGCCACAGCCTCGGCGGCGCGCTCGCCGCCGCGTTCCCGGCGCTCCTCGCATTCCACGGCGAGGCCGACGTCGTGTCCCGCATCGCCGCTGTCCACACCTACGGCCAGCCCCGCGTCGGCGACGCCACGTTCGCCGGCTTCCTCGCCGCCAACGCGGCGACCCCGGTCGCGTTCCAGCGCGTGGTCTACCGGTACGACATCGTGCCGAGGGTGCCGTTCGACGTGCCGCCGGTGGCGGACTTCAGGCACGGCGGGACGTGCGTGTACTACGACGGGTGGTACGCCGGGAGGACGCTCGCCGCCGGCGAGGACGCGCCGAACAAGAACTACTTCAACCCCAAGTACATCGTGTCCATGTACGGCAACGCGTGGGGTGACCTGTTCAAGGCCATGTTCTTGTGGGCGAAAGAGGGGAAGGACTACCGGGAGGGCCCCGTGTCCATCGTCTACCGCGCCGCCGGCCTCCTCTTCCCCGGCCTCGCCTCCCATAGCCCTCGTGACTATGTCAATGCCATCCGCCTCGGCCACGTCGCGTCCAAGGAAGCTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018787