Os11g0679700

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Revision as of 09:19, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0679700| Description = Lambda integrase-like, N-terminal domain containing protein| Version = NM_001074987.1 GI:115486622 GeneID:4351119| L...")
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Gene Name

Os11g0679700

Description

Lambda integrase-like, N-terminal domain containing protein

Version

NM_001074987.1 GI:115486622 GeneID:4351119

Length

3367 bp

Definition

Oryza sativa Japonica Group Os11g0679700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29329611..29332977

Sequence Coding Region

29329674..29330378,29331794..29332720

Expression

GEO Profiles:Os11g0679700

Genome Context

<gbrowseImage1> name=NC_008404:29329611..29332977 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29329611..29332977 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccaagaagaagctgtcacataggctgttctctgccttggtatccctactccttcatgggaagcctatctctagatcatcatccaacaccaacaccacattgccacacccttccttgctgcacaagtcctcctcaagcttccctcccatggagaagctcgccgcgaaaaccctagtactcgacgtcgaaggcggtttgcttagatcatcctccttgttcccctacttcatgcttgtggcactagaggcaggagggttcttgaggggccttgtgctcctcctcctctacccattgctatgtgtcatgggaagtgacatggccttgaaggtcatggcaatggtgtccttctgcggtttacgggcaagccggtttcgggccgggcgagccgtgcttcccaagtggttccttgaggatgttggggaggaagggtttgatgtgatgaggagtgccatgaggagggtgtgtgtgacaaagatgcctaggatcatggttgaagggttcttgaaggagtacttggaggttgaggttgtttcaggtagggagatgaaggtgatttgggggttcttcactggcatcatggaggaggaagaaggtggtgatcaagaggaggtgttgcttgaggagaagaaaatgttggttgatgttgtgggcttctctacctccttggagttcctccaacatcatctctcacattgttgcaaggaggtgtacctggtgacacgtgaggagaaggcgaggtggtcggcgctgccgcgcgacaagtacccgaagccgatggtgttccacgacggccgcctcgcgttccggccagccgccggcgacacgctcgccatgttcacctggctccccttcggcgccgccctcgccgtcgcccgcctcgccgtcgcgctcgccgtgccgtacaggtactcgacgccgatcctggccgccacgggcttgtcgtggcgcctcaagggcgaggcccccacgccgctcgccggcgccggcgacggcgcgcgccggcgcgggcagctgttcgtgtgcaaccaccggacgctgatcgacccggtgtacgtgtcggtggcgctggaccgccccgtgcgcgccgtgtcgtacagcctgagccggctgtcggagctgatctcgccgatcgggcggacggtgcggctgacgcgggaccgcgacagcgacgggcgcgccatggcgcggctcctcgacggcggcgacctcgtcgtcgtctgccccgaggggacgacgtgccgggagccgtgcctgctccggttcagcccgctgttcgcggagctgagcgacgacgtggtccccgtcgggatcgccgtcgacacggcgatgttctacgcgacgacggccggcgggctcaagtgcctggacccgctctactacatcgccaacccgaggacgtgctacgccgtgcagttcctggagagggtggacacgtcgccggcgagggagcggagggcgccgtccaccgacgtggccaacctcgtgcagaggaggatgggcgacgcgctcggctaccgctgcaccatgctcaccaggaaggacaagtacctcatgctcgccggcaacgatggcgtcgtcaacaccacccaagacaaccactctgctccggggaagaagaagatgcaataa</cdnaseq>

Protein Sequence

<aaseq>MPKKKLSHRLFSALVSLLLHGKPISRSSSNTNTTLPHPSLLHKS SSSFPPMEKLAAKTLVLDVEGGLLRSSSLFPYFMLVALEAGGFLRGLVLLLLYPLLCV MGSDMALKVMAMVSFCGLRASRFRAGRAVLPKWFLEDVGEEGFDVMRSAMRRVCVTKM PRIMVEGFLKEYLEVEVVSGREMKVIWGFFTGIMEEEEGGDQEEVLLEEKKMLVDVVG FSTSLEFLQHHLSHCCKEVYLVTREEKARWSALPRDKYPKPMVFHDGRLAFRPAAGDT LAMFTWLPFGAALAVARLAVALAVPYRYSTPILAATGLSWRLKGEAPTPLAGAGDGAR RRGQLFVCNHRTLIDPVYVSVALDRPVRAVSYSLSRLSELISPIGRTVRLTRDRDSDG RAMARLLDGGDLVVVCPEGTTCREPCLLRFSPLFAELSDDVVPVGIAVDTAMFYATTA GGLKCLDPLYYIANPRTCYAVQFLERVDTSPARERRAPSTDVANLVQRRMGDALGYRC TMLTRKDKYLMLAGNDGVVNTTQDNHSAPGKKKMQ</aaseq>

Gene Sequence

<dnaseqindica>64..768#2184..3110#acaattcaatccatttcttcctctaccatactatacctagcttgccaccaacaacagtacaccatgcccaagaagaagctgtcacataggctgttctctgccttggtatccctactccttcatgggaagcctatctctagatcatcatccaacaccaacaccacattgccacacccttccttgctgcacaagtcctcctcaagcttccctcccatggagaagctcgccgcgaaaaccctagtactcgacgtcgaaggcggtttgcttagatcatcctccttgttcccctacttcatgcttgtggcactagaggcaggagggttcttgaggggccttgtgctcctcctcctctacccattgctatgtgtcatgggaagtgacatggccttgaaggtcatggcaatggtgtccttctgcggtttacgggcaagccggtttcgggccgggcgagccgtgcttcccaagtggttccttgaggatgttggggaggaagggtttgatgtgatgaggagtgccatgaggagggtgtgtgtgacaaagatgcctaggatcatggttgaagggttcttgaaggagtacttggaggttgaggttgtttcaggtagggagatgaaggtgatttgggggttcttcactggcatcatggaggaggaagaaggtggtgatcaagaggaggtgttgcttgaggagaagaaaatgttggttgatgttgtgggcttctctacctccttggagttcctccaacatcatctctcacattgttgcaaggtataatatgtcataagtaattaattcaacatgtaaaatttgcatgtttgtgttaattcttatactttgttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatttgacttaacttgcatgtgagtttagatcacctagctaaggtagctagttttacatgtataaactcccctttttggtttgtgtgatttagctagttcaggtattagacatgcatgtaatacgcgtgattggattgaaacaacgtatataatatctgcatatttacacctgaaagtaaaattagatgtaatagttaattacgtgcacgacgtcttttcaacggccggtctcatgctgatcgtgcaatcattgatcatatatacatactttttttcctctttttatgtattctttttgtatctcatcatgtgagaccaacaaaagcataatatctgttactgttagacggccactcattaattttcccagaaagaatgtgacctttaccatcaagtcacaggttttaccccttttcccaaactccccagcactttcccgtgtcaattaaatttaagaatattttgatagtcctccaaaaaaatagagaatattttgatagaaatagagaattttcctcatgtgaagtagtactgtatagtgcatacacaacatttcgtcaaatctctaattaatctgaccatttaatcacacatgcaacagtttcgttcccacgttataaaatttgagatctgaattactgtgtatgcatttcatcttgtcaaatctgtaattaattcgaccatttaattatacaacagtttcgtgttcccacgttaattaaatttgatcagaacaatttgatacaactaatactactattttcaaaattaattcccctcatgtgcattgctgtatgcattccatcttgtcaaatctgtaattaaattgaccatttaatcacacaacagttccattccccacgttaattaaatttgagaacaatttgagatacaaccaataccactattttcaaattaatttccctcatgtgaattactgtatgcattccattccattccatttcattttatttccccaaccacttttgagatttgctagcagcatagtgtggtgccaccccctccctcttgtttgttggagtagttttttttttcgcagtagtccttttcttttcgcaattggttgttgcagtgattttttttttactctcttccagcatacgtatgtctagccgattgcgttgtgtatcaaaacctctatttcttactaatatattgacgtacaatccttttacgtattcgcaaaaaatctgtatttaatttgacaagttaattattaattactcactcacacaacacaggaggtgtacctggtgacacgtgaggagaaggcgaggtggtcggcgctgccgcgcgacaagtacccgaagccgatggtgttccacgacggccgcctcgcgttccggccagccgccggcgacacgctcgccatgttcacctggctccccttcggcgccgccctcgccgtcgcccgcctcgccgtcgcgctcgccgtgccgtacaggtactcgacgccgatcctggccgccacgggcttgtcgtggcgcctcaagggcgaggcccccacgccgctcgccggcgccggcgacggcgcgcgccggcgcgggcagctgttcgtgtgcaaccaccggacgctgatcgacccggtgtacgtgtcggtggcgctggaccgccccgtgcgcgccgtgtcgtacagcctgagccggctgtcggagctgatctcgccgatcgggcggacggtgcggctgacgcgggaccgcgacagcgacgggcgcgccatggcgcggctcctcgacggcggcgacctcgtcgtcgtctgccccgaggggacgacgtgccgggagccgtgcctgctccggttcagcccgctgttcgcggagctgagcgacgacgtggtccccgtcgggatcgccgtcgacacggcgatgttctacgcgacgacggccggcgggctcaagtgcctggacccgctctactacatcgccaacccgaggacgtgctacgccgtgcagttcctggagagggtggacacgtcgccggcgagggagcggagggcgccgtccaccgacgtggccaacctcgtgcagaggaggatgggcgacgcgctcggctaccgctgcaccatgctcaccaggaaggacaagtacctcatgctcgccggcaacgatggcgtcgtcaacaccacccaagacaaccactctgctccggggaagaagaagatgcaataattatgaattagattagccaaaaaagttctcaaaaaagttctagatagatttcggttgttcttttatctttttaattatttttttatgttgctgggtagtttaatttggtgtgtgtttatactgtatttcattcttgcttcagtttggctggtgtgttcatcaggttgatttcttctgtgtgttttaatcaaattaatgattgtatagaaacaacaagaagctggcaccatcaaggagcttgtagagaaagtactact</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0679700, RefSeq:Os11g0679700