BGIOSGA018802

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018802| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018802, complete gene.| tag = OsI_184...")
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Gene Name

BGIOSGA018802

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018802, complete gene.

LocusTag

OsI_18458

Ensembl Transcript ID

BGIOSGA018802-TA

Ensembl Protein ID

BGIOSGA018802-PA

Length

8049

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:3005105..3013153

Sequence Coding Region

3012722..3013153,3012286..3012431),complement(3010557..3010620,3010213..3010254),complement(3010085..3010138
,3009946..3009995),complement(3009834..3009861,3009568..3009645),complement(3009078..3009120
,3005776..3005814),complement(3005404..3005568,3005105..3005226

Genome Context

<gbrowseImage1> name=IndicaChromosome05:3005105..3013153 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:3005105..3013153 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGCTTGTCGCGGCCGGCGAGCCCCGCGGGCGGGTACGCTCGCCGGGGCAGCGGCGGCGGGTACGGGCACCACTACTACGGGGGCGGTGGCGGTGGATCGGCGCAGACGTCGCCGCCGGGTGGATCTCCGACGGCGTCGCCCGTGCACCGCCACGCGCGGACGGGGTCGCTGGGTGGCGCGGGGGCGGCGTCCACCGTGGGGCGACGTGGCCGCGCGCATAATACCGCGGCGAGGGCCGCGGCGCAGCGGCTCGCGCGGGTCATGGCGTCCACCGACGGCGCGGGGGTAGGAGGAGGAGGCGGCGGCGTGGGTGGTGGTGGGGATGGGGGCAGCGGCAGCGACGACGACGAGTACGAGCTCTCGGGGCCACCCATCGAGCTCTCCTCCACCCCGCGGCGCACCGGCACCCGCTCCCCTTCCCCATCGGCTCCGGTGAGCCGACCACCGTCGTTGACGAACCGATACACGCCCGGGAAGTCAGTTCCGATGATACCTTCGATCAAGCAACAGAACCGGCCAGCGACGAGCGGTCCAGGGTCAGAGTCGCCCGCAATAAATCGACGGGAGCAAAGGAGATCAGTTGATCTTGGAAGCTCTCTAAGAGCGCGGCGCACATCTTCTTCTCTTCATGATGAGATTAACTCACTCCAAGTGGAAACCGAGGGCATGTACGAAAAATTTAACCTTGCAGAAGAAAGGAGTGAGGAAGGAGATGCTAAGTCCATGCACATGGCTGCTGTTATTGCTGATGCTATAGAGCCAGAGGCCAATCTGATTAGCAGAAAGGATGCAGCGCTACAACAAAGAAAGGCTTCATTGAGAAGTGCTTCAAGAAGGTCTAACAGTGCTAGCTGTGATGAAATTGCAGCCCTTCGGTCAGAAGCAAAGAGATTCTACAAGTACGATGCAAAAGTAAAAAAAGGAAGTAAAAGTCCATCTTCTGAAGGCCAGAACCCTCCAGAGTCATTAGAACTGGTATGTACAAGAACTCATGAATACATATGGCAGTCATGGTTAACCTACTTCTGGAGACGGGCCAAAAGTCATGACATAGAAGAAGATATAGCTGATGAGCGGCTACAGTTTTGGATAGAACAAGGCAATCATCCAGTTTCTACGATCGATATCATAGAAGTTGAGAGAGGACTTACTGAGCTGAGGAAGCTGGGAATCGAGTCTCAGCTGTGGGAATCGACGAGGAGATCTCTCGACGATGACTTTAGCAATCACGGGAGCCCAACCGGATCAGAAATTTAG</cdnaseq>

Protein Sequence

<aaseq>MDRLSRPASPAGGYARRGSGGGYGHHYYGGGGGGSAQTSPPGGSPTASPVHRHARTGSLGGAGAASTVGRRGRAHNTAARAAAQRLARVMASTDGAGVGGGGGGVGGGGDGGSGSDDDEYELSGPPIELSSTPRRTGTRSPSPSAPVSRPPSLTNRYTPGKSVPMIPSIKQQNRPATSGPGSESPAINRREQRRSVDLGSSLRARRTSSSLHDEINSLQVETEGMYEKFNLAEERSEEGDAKSMHMAAVIADAIEPEANLISRKDAALQQRKASLRSASRRSNSASCDEIAALRSEAKRFYKYDAKVKKGSKSPSSEGQNPPESLELVCTRTHEYIWQSWLTYFWRRAKSHDIEEDIADERLQFWIEQGNHPVSTIDIIEVERGLTELRKLGIESQLWESTRRSLDDDFSNHGSPTGSEI</aaseq>

Gene Sequence

<dnaseqindica>1..432#723..868#2534..2597#2900..2941#3016..3069#3159..3208#3293..3320#3509..3586#4034..4076#7340..7378#7586..7750#7928..8049#ATGGATCGCTTGTCGCGGCCGGCGAGCCCCGCGGGCGGGTACGCTCGCCGGGGCAGCGGCGGCGGGTACGGGCACCACTACTACGGGGGCGGTGGCGGTGGATCGGCGCAGACGTCGCCGCCGGGTGGATCTCCGACGGCGTCGCCCGTGCACCGCCACGCGCGGACGGGGTCGCTGGGTGGCGCGGGGGCGGCGTCCACCGTGGGGCGACGTGGCCGCGCGCATAATACCGCGGCGAGGGCCGCGGCGCAGCGGCTCGCGCGGGTCATGGCGTCCACCGACGGCGCGGGGGTAGGAGGAGGAGGCGGCGGCGTGGGTGGTGGTGGGGATGGGGGCAGCGGCAGCGACGACGACGAGTACGAGCTCTCGGGGCCACCCATCGAGCTCTCCTCCACCCCGCGGCGCACCGGCACCCGCTCCCCTTCCCCATCGGTAACCTCAATCCATCCCCATTTTCACTTCCATCACTCGGCAGCGGCATTCAATCGTCAATCCCATCTTCCTAATAATCTAATACTCGTTCACGATCTCCTAATTAATGGAATATGCCGGCTGATTTATGATTTTACATCACGCATTTCGCATTGTTTATGCGGGTGATGTGTTTGATGTGATTATTTGTTACTTGTGTTCACCAACCAATGGTGGGCATGGTGCTCGGCGCGCTAAGTGGTGGCGTGTAATTCTGTGCATTTTAGATAGGTCGTTACCTTTCGGATCAGGCTCCGGTGAGCCGACCACCGTCGTTGACGAACCGATACACGCCCGGGAAGTCAGTTCCGATGATACCTTCGATCAAGCAACAGAACCGGCCAGCGACGAGCGGTCCAGGGTCAGAGTCGCCCGCAATAAATCGACGGGAGCAAAGGTATGCTCACATGTTTCAGGTCTTGCACGTGGCAGATTTCATACTGCATTGTTGAAATTGTTCCCATATACATATAGCTTCTCCTTGCTCAATTCAGCATGGCTATGCATTCGAGAGGATGTTATTTATCCTGTCCCATGTGATTTATAAGTGGCGAAGCCAGGATTTGGGGTCGGGGGTGTGGGGTAGGGATAAGCCATAAGGCCGAATAACCAATATCGATAGCAAAGGAGGCCAAATAGTCACTGTCAATAACAATAAATGTGTAAACTAGTTCTTTACAAAAAAAAACTTGAATTTTAGCTCTTTAATAATATAATTGGAAGTTTGGAACTAGTTCTTAATGCTAAATCCTTTCAATGTAAATAGGCATCTTCTATTTTACTTTGAAAAAAAATGGGAAATCACTAACTAATTTTGTAGATATTGTTTCTTGCTAATGGGCTAATGTTTTTTTAGACTTGCTAACTGCCTGACCTTGTAAGTACAACCATACAACAACAGGGAGGAGGGGTTCAGATAGGGGTGTGTTGGCACCCTCCGGCACCCCCAACAGCTCCGCCACTGATTAATAATAATGGCATGCATGCTAATACTGGCTAGTTTAGTTTGAGGCTGTAGCTTATATACCACATATCAGTTAGATGTGTTAGTTTACTCGGCAGAGAAATTGAGCTGCAGATCAAAGCAATGGGCTTTGTGCCATCATTTTGTTGTTGGATGGAAATTTTATGAATTTGTTCTGTTGCTAATTTTCTGATGTAGGCACCATATTATCATGAGCTTCGGAATGGATAACACATCCACGAGTGTTGCTTTATATGTATTGCATTTGGGATTTACCCTAAGCGCTACCTATCATCTATGTAAATTTATGCATTTCTTCACAAATGGTGGATCCAAGTGCACCAATGTGTTGCTTTGGAGAAAATTAAACAGAACAAGTCGCGAATAGAAATAAGTCAAATAGCTAATCTAAAAACACAAAAAGCTTGTTACAAAATTCATGCATGCACTAACCTAGGTTGATGTGGCATTTGAAACAGATTATTGCCTTAGATTATCTACTTGATGATAGGGATAAGTTAAATACTTTGAGAAATAAACTTAACAGATAGCTTAGAACAAGTGGTCTAAGCAACGCGGTAGATGTTTTTTTTTTTGTTGAGAAGCCGTATTTTTAGAGCCGTGGAGCAATAATCCATGACAGCAATCCGGCAAATAAGCTACTACTACCTCCGTCCCAAAATATAGCGACTTTTGGAGCTAGAAATGCTTATTTTTCCACATTTCCTGGGATCAACTTCAGTTGGTTCCACCTAGGTAGTAGGGTACACACACGCTTGCGCATTCAGTGGTACTGCATGTTTCCCGTGCATTGAGGACTTAGTACCTCAAATCTCTTTCCTACCGTGTGTTAGGGACGTGCACGCGTGTGTTGTGGTGTGAGTGTGGTATGTGTTCGTGTGTGTCCTGAGTTGTACCCTCTCAAAAAAAATGCTTATATTTTGGGATGGTGTAACAAATAATGCCTTTTGTCGTATCTCCTTCCTGAAGTCTCTTTGTGTTGTTAATTGACAGCAAGCACCCAATTGAGTTTTTGTTCTCTTTTGAATATTATTTTTTATGATCACTAATAAGTAATATAGGCTAAATCATCCTTAGGAGATCAGTTGATCTTGGAAGCTCTCTAAGAGCGCGGCGCACATCTTCTTCTCTTCATGATGAGGTGATTCCTGTCATAAACAGCATTTTCTAAGAATTTTTTTCTTTGAAAACACAGGAGGATAAGAAATATTAATGATAGGAAATGCAGAATATCCTATATACTACTTGAGTTTGTCCTAAAATATGAGTTTGCTCTCATCTATGTTTAGTCCTTGATTCTTGTTCCAGCGAAATGTGGTATGACTGTTTGTATGGACTTTTGGATCCATCTGCCAAAAGTCCAAAACAGCTATCTTTCTCCACTTTAAGATTAACCTTTCTTATATGCAACACTAGTGTGATTCTTTGATGCCTCCTTTGCAGATTAACTCACTCCAAGTGGAAACCGAGGGCATGTACGAAAAAGTGAGATGAAATCACGATTTTGGATTTAATTTCTGCTTTAATTTGTTAGAAACACTCAAACATGCATCTTCCAGTTTAACCTTGCAGAAGAAAGGAGTGAGGAAGGAGATGCTAAGTCCATGCACATGGTATGTCCATACACAGATACCCCTCAGCTATGCATCTTCAATGCATTGTTTGATGTATTGTGTCAACATCTCTGATGTCCACATTTCAGGCTGCTGTTATTGCTGATGCTATAGAGCCAGAGGCCAATCTGATTAGCAGGTGTATAATTTAACAAAACACGCATCTTCTTGTTATACATGCATTGCTTCTTATCTTAAACTATGTTCCCATCTTGACTCCCAGAAAGGATGCAGCGCTACAACAAAGAAAGGTAGGTTTCTGCACCAAAATCCATATGTTCAAATTTGATGGAACAATTTAAATTGAAAGATTTTTTTTATTAGAGCTTCATTTTTATGAATATTTCTGCACAATAATGTTGAGTTTATGACTTTATGTGCTTTTGGGTGAACAAATTTCTGTTTACTAACTCTTTCCGAAGATCTGTTGTGCTCTTAGGCTTCATTGAGAAGTGCTTCAAGAAGGTCTAACAGTGCTAGCTGTGATGAAATTGCAGCCCTTCGGTCAGAAGCAAAGGTAGAGCTTTCACCAAATATGGTTACTTATTGCTGAACGATTTTCCCAGAGTTGTATTTTGCAAACCTAACTTTTATTTATGCTGTCGGGTAGGTTGCCAATTCTGTATCATCCGTATCTCAGCGTCTAAAAAGTACGGGATCAATCGTGAGATCTCTTCACGGAGCAACCAATAGAATGGTCCTGTCTCAAGAAGAGATGGTGAATATGTTTGCCTCACTATTTATACTTTGACATTTCGTAGCAAATGGATATATCATTAAATCTGTTTATGAAAATCCTTTTTAGGAGGAGGTGGTGCTAAAGAGATGTTGGCTTGCTCGCTACTGGAAACTGTGTGTTAGACTTGGTATTGAGATACTTCACACTATTAATACTTATTTACAGAGTGGTGGTATTCCTTCTGTTGTAAATTCTAACTAGGTCTCAAATGTATGTACTATGTAGAGATTCTACAAGTACGATGCAAAAGTAAAAAAAGGAAGTAAAAGTAAATTCGTAAAATTTTAAACAGATGTAAACTTTAAGACTGAAAGAATCAAGATATGCATTATTGCCCTTGCCTGTTCTGTCCTTTAAATACACATGCAAAAGATTGGATAATGCTTTGCATATTTTACCTTTAAAATATTGTGATTGCTGCCTTGCTACTTCTATATGCTTTTTCAAATAACTAAATTGAGTAAGTATATTTGTGTAGCAGTGTGTTCATTACTTGGATACTATGATTTTCTATGAAGCTTCATATCTTTTTCTGTTTTATTATTTTTTTTGCTACAGATTAATGTCAGGGTGTTGAGGAATTAGTGTCTTTCAGACTGTTTTCCTTTTCAGGCAGTCAATTGTTTCAAAAATAAATTTGTTGTTTACATGTTTTCTATGGCTAGCTAAATTGAGTTTTTTTTATCAGGTATACATTGTGATATTGCTGAAGAAAAACAAGAATACTGGTCATCATTTGCACCACTTTCACTTGAAGTTGTCCTGTCAATTGGGCAAAAAGCTAGAGATGGAGCATTGTCAGGTCAGGTTCCTTATCAAAAACTCTTTTGTGAAGATGTTGATTCAAGTATCTCATGTTCAGTTACTCTACAAGTGCTTTGATTATAACCATTGGCTATCTTATGGACATGGAATCGAGACCCAAATTATCACCAATCAGGATACCTCATAGCTTAGATCGAGAAAAAAACTTATGTTTGATTTTCTCAGATAAAATGCCAAGACTTAGTTCCAAAGGCCATAATAGAATGAAGCAATTCTTTAACTTCAGTAGGTCCACCTTAATTGGTAGATGAATTCAATGATCAAGGCTTGCATGGCGGATGGGTGGGATCCGATGTTATTTGAAGCAGCTATTGATACCGCCTCCGTGGGAGCCAACGGTCGTGGTTGTGAGGCCTTTTCTGGTGGGATCTGAATCTCATCTCTGGTTATGGCTGGTCGGAGTTGTTTGTTTGTTTCTAGGCATTGTGTTGGTCGGTTAAAGGTCATGTTTGGCATTGTCTAGTTGTTGTTTTGCTTGTGTGAGGCGTCTTTTAGTTGTTTCTTTGGTTGTGCTTGGTTGATGTTCTGGTCATGTAAGGTCGCATGAGGCCGCAGGGGCAGATCTACTGCCTGGTGACCCCAGGCAGCTGCCCGGGCTCGTCGGTGGTTAATCCACTAAAATTCCATGTAATTAAGAAAAAAATGAAATAGAATTTCTGTAGTAAATACTAGCTATAGTGAAGTTTGCTCGTGCTCTAAAATAATTCTAGATACGCTACTGTGAGGCCGTTGTTTTGGTTGTGCATGGTCATGTAAGGTCGCTGTACCTGGCTATTTTAGCTTTTCTTCTCTCGTAATGAAATGACGTGCAGATCTCTGCCATGTTCCAGGAAAAAAAAACTTAAGTAGGTCAAATAGCTAGTAAGAGTTTAAATTAATCTACAGAATGTACTTGAGTTGTTCAAAGTTCGCTGTCCATTTTCTGATATTTAATTTGTGGTTAATATTGGATGATTGCCACTTTTAATTCTGCACCATGCAACTACTGAATGATTCCAAGGACTTTTGTCCCCTGAACATGCAGAGTAACTTGCTCCATCTTTTGCTTTAGGCACTAAAGTTCTCATCAAGAGGGTTGATCTTTTATTTATCTCCTTCATTTTTCATGACCATGTTACCAGATGAAGCATCATTCTTTTGAAGTGTACATAGCTCATATAAATTCATCATTTCAATCACTACATATCTGTACATATCTGCTCTACAGAATTGTTTGTATATAACGCAGATCATGCTGACATGGAGACCAAAAGCAAAATGTCTGACGCAAGTCACGTGAATGATATGAGTGGAGATGGAAATATTGAGAGCATGCTTTTAGTTGAGAGAGGACTACGTGAATTATCTTCACTCAAGGTTTTTCTTGCTACTTATTATTTTGATATTCATCTAGTTTATACCTTTCTTTCAAAGTCCATGTGATACCACATGACAAGTTTGGTGAGATACATGGTCCAGAAATAAAACCGTGTACTTGAATATTTTGTTCATCTTTCATTTTCTTTCTGTTCATAAATTTGCAATGAATTTTTCCTAGAATGTGAAAGTTATCTTCTGTCAATTCTCTCATTTTTTTTTAAAGTCAGTTTTAGTGTTGATGAAGTTAGTTCAAAATATTTTGATTTGGTTTCAGTCTCATCAGTTGATACAAAGACTGCTAATTCACTATTCATGCATCACTTTTTTGTGTAATTAGTGAAATGCAAAGTGATGTATGAAACTTAAGAGTGCTACTAGACTATTACTACTACTCCCTCCGTTTCATAATGTAAGACTTTCTAGCATTGCCCATGTTCATATTAATGTTAGTGAATCTAGACACACATATATGTCTAGATTCATTAACATCTATATGAATGTGGGCAATGTTAGAAAGTCTTACATTATGAAACAGAGGAAGTATTAGATTGACTAGCTTTATCATTGTGTTGTATATATTAGATGCAATATATGTGTCAACGAATTTTCATTTACATATTCCCACGGAATGGTAGAGAACTATTATTTATTTGGGTTTCGGTCTCAATAATTTAATATCCCCTTTGAAGGTAGAGGACGCAGTCATGCTTGCTTTATCAGAACATCGACGCGTCAGACCTCTCTCAGGTGGCTTCTCCAAAATGTACTCATTTCTTATTCTTTTCTTATAATATTTTTGTTTTATGAGATTCCCAGGTCTCTTATCTCAAAATATTTCTCTCTCTATCAAGATAAACTCATAAAAATTTTTTTTTCTTAATATTCAGTACATGGGGAATGTATGCGAGCCTCACTGTGAGGGTACCGACAATTTGATGTTTAACACATAGCATAGCTTGGGATTTTGAGAGCTGGTTATACCAATTCCCTCGTTCCTGATGAGAAGTGATACACTGACTGATTGTGATACCATGAACAAAACCGTATTTACAAGATAGCTCATTTATTCAGATGTTGCATATGAAATAACTTCACAACAAAATATTAGATAATATTTATTGTGCTGAAGAATTGCAGTTTATTGTGATTAGAACTGCTTTCTAGAATCATCCCTGCACAATTCACTGAGACTTCAAAAAAATTACTATGTCGCTATGTTGACCTGATTCTATTAGATGAATACAACTTCCAGTCTGAATATTGCAACTTTATTACGCACATCAATGGCCTGCAGCAATGCGTGACGTGTAGTTTTACTACTATGACTTAAGTTTCCAATTACTGCAGGTCCATCTTCTGAAGGCCAGAACCCTCCAGAGTCATTAGGTTAGTTCTACTTTACTAATATTCCTTTTTACATCCATAGCTCGGGAATAACAATTTCACTTTCTAATTACATATGCTGTCATTGGTCCTAGAATTAAGCGAGGAAGAGCAAGACGACGTACGCTTCAAGCAGGTGAAAAACCACTCTGGCATTTTGTTTTCTCCTGGAATCGATGTGATGTTGCACAAAAATTCGTTTTCGGTCAGAACTGGTATGTACAAGAACTCATGAATACATATGGCAGTCATGGTTAACCTACTTCTGGAGACGGGCCAAAAGTCATGACATAGAAGAAGATATAGCTGATGAGCGGCTACAGTTTTGGATAGAACAAGGCAATCATCCAGTTTCTACGATCGATATCATAGAAGGTAATCTCCTCTCTGAACAATGATGAAACTCTTGTCTCAAAGTCTGCCATCCTTTGCACTATTCGTTCAAAGTTTGAAATCATATACTTCTCGTTTTGACTGTCTTGTACAAAATTTACCGGCTAAATTGCTTACTTTATCTGATGCTTTTCTTGTTTGCAAAATTATGTAAACAAGTTGAGAGAGGACTTACTGAGCTGAGGAAGCTGGGAATCGAGTCTCAGCTGTGGGAATCGACGAGGAGATCTCTCGACGATGACTTTAGCAATCACGGGAGCCCAACCGGATCAGAAATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018802

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018802&oldid=47558"