BGIOSGA018808

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018808| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018808, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018808

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018808, complete gene.

LocusTag

OSJNBA0077J22.11

Ensembl Transcript ID

BGIOSGA018808-TA

Ensembl Protein ID

BGIOSGA018808-PA

Length

4267

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2961158..2965424

Sequence Coding Region

2965291..2965424,2964737..2964800),complement(2964502..2964637,2963902..2964053),complement(2963752..2963799
,2963563..2963655),complement(2963205..2963311,2962800..2962914),complement(2962634..2962720
,2962249..2962453),complement(2962070..2962164,2961698..2961766),complement(2961506..2961613
,2961308..2961426),complement(2961158..2961233

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2961158..2965424 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2961158..2965424 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGCTCCGCGTGCTGAACCCGAACGCGGAGGTGCTCAACAAGTCGGCGGCGCTGCACATGAACATCAACGCCGCCAAGGGCCTCCAGGACGTGCTCAAGACCAACCTTGGCCCCAAGGGCACCATCAAGATGCTTGTGGGTGGAGCTGGCGACATCAAGCTGACCAAGGATGGGAACACTCTCTTGAAGGAAATGCAAATCCAGAACCCAACAGCTATCATGATCGCAAGGACCGCGGTTGCACAGGACGATACCAGCGGTGATGGCACAACCTCCACTGTGCTTTTTATTGGGGAGCTTATGAAGCAATCTGAGCGGTGCATTGATGAAGGCACTCATCCACGTTTTTTGGTTGATGGTTTTGATGTTGCCAAGAGAGCAACTCTTGAATTTCTCGAGAAGTTCAAGACATCAGTTGTCATGGGCGATGAACCTGACAGAGAGATCTTGAAAATGATAGCAAGAACTACTCTAAGGACAAAGCTGTACGAAGGATTGGCTGATCAGTTGACTGATATTGTTGTGAATGCGGTTCTATGCATCCGCAAACCTGATGAACCAATCGATCTTTTTATGGTTGAGATAATGCACATGCGCCACAAATTTGATGTTGACACACGTCTGGTTGAGGGTCTGGTCTTGGACCATGGTTCTCGGCACCCTGATATGAAACGCAGGGCAGAGAACTGTTATATCTTGACCTGCAATGTCTCACTGGAATATGAGAAAAGTGAAATAAATGCAGGATTTTTCTACTCGAATGCAGAACAAAGAGAAAAGATGGTTGCTGCAGAAAGGCGCCAAGTTGATGAGCGTGTGAAGAGGATTATTGAATTGAAAAATAAGGTTTGTGCTGGAAATGATAAAAATTTTGTGGTGATCAATCAGAAGGGTATTGACCCTCCATCCCTCGATCTCCTAGCTAGAGCAGGGATTATTGGTCTCCGAAGAGCAAAGAGGAGAAACATGGAGAGGCTTGTGTTAGCATGTGGGGGTGAAGCTGTTGATTCAGTTGATGATTTGACTGAAGATTGTCTTGGCTGGGCTGGGCTTGTCTATGAGCATACTCTTGGTGAAGAAAAGTACACCTTTATTGAGAATGTGAAAAATCCTCGCTCTTGCACTATACTGATTAAAGGGCCTAATGATCACACCATTGCGCAAATTAAGGATGCTGTTCGCGATGGTCTAAGATCTGTTAAGAATACGGTTGAGGACGAAGCAGTTGTGCTGGGAGCAGGAGCATTTGAGGTTGCTGCGAAGAAGCATCTTATTGACAACGTGAAGAAAACTGTCAAAGGACGAGCACAACTTGGGGTGGAGGCATTTGCTGATGCTCTTCTTGTCATACCCAAAACACTAGCAGAAAATTCAGGTCTAGATACCCAAGATGTTATTGTCGCTCTCCAGAATGAACATGATCGTGGATTGGTGGTGGGATTGAACCATCACTCTGGCGAACCAATTGATCCCCAAATGGAGGGCATCTTCGACAATTACTCCGTGAAACGCCAGATCATCAATTCCGGACCCATCATCGCGTCACAGTTATTGCTTGTGGATGAAGTGATCAGGGCTGGCCGCAACATGAGGAAACCAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MSLRVLNPNAEVLNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPTAIMIARTAVAQDDTSGDGTTSTVLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMIARTTLRTKLYEGLADQLTDIVVNAVLCIRKPDEPIDLFMVEIMHMRHKFDVDTRLVEGLVLDHGSRHPDMKRRAENCYILTCNVSLEYEKSEINAGFFYSNAEQREKMVAAERRQVDERVKRIIELKNKVCAGNDKNFVVINQKGIDPPSLDLLARAGIIGLRRAKRRNMERLVLACGGEAVDSVDDLTEDCLGWAGLVYEHTLGEEKYTFIENVKNPRSCTILIKGPNDHTIAQIKDAVRDGLRSVKNTVEDEAVVLGAGAFEVAAKKHLIDNVKKTVKGRAQLGVEAFADALLVIPKTLAENSGLDTQDVIVALQNEHDRGLVVGLNHHSGEPIDPQMEGIFDNYSVKRQIINSGPIIASQLLLVDEVIRAGRNMRKPT</aaseq>

Gene Sequence

<dnaseqindica>1..134#625..688#788..923#1372..1523#1626..1673#1770..1862#2114..2220#2511..2625#2705..2791#2972..3176#3261..3355#3659..3727#3812..3919#3999..4117#4192..4267#ATGTCGCTCCGCGTGCTGAACCCGAACGCGGAGGTGCTCAACAAGTCGGCGGCGCTGCACATGAACATCAACGCCGCCAAGGGCCTCCAGGACGTGCTCAAGACCAACCTTGGCCCCAAGGGCACCATCAAGATGTATGGCCTTCCTTCTCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCCCATCTCGTTGGGCGCTCCTGTGCTAGCTGGTTTGATCTGATTCGATGCGGGGGAGGTGTTGCATCGGCTAGATCACACACGCGCGCGCTTGCGCGTAGCTGTAGTAGATTCGCGAGGCGTAGGCTTTCTCTGATTTTTTTTGTTGTGTGTGCTGGGCTGTGGATGCGGTTTCTGTGGTTTGCAGATGCGTTATTTCTAGATTTGCGCGGCGAGGTGCCGCACACTGTTTGATCCAGTTCGTAGGTTCGGAATGGCGGATGTTTGGAAGGGTTTGGTAATGAGGTAGCTGGCTAGCTGCTAAGATTTGCAATGGCGGTGTTCTTTTTTTTTTTTTTGGAATAGCGATTTCTAGATGTCTAGGTAGAGGTACGATGTGTTGTAATGGCTGTGATCCAGCGAAATTTGCTCTACCTGAATGCGTTCGCTATTTTGCTGCACAGGCTTGTGGGTGGAGCTGGCGACATCAAGCTGACCAAGGATGGGAACACTCTCTTGAAGGAAATGGTATAGTTACGCTTGGCAATTAGTGTTTGTGGCGAGGGCATTTTAGTGTTGGAAGTGATCTGATCTTTGGTTTGTGGCTTCTTGCGTCTCGATTTACAGCAAATCCAGAACCCAACAGCTATCATGATCGCAAGGACCGCGGTTGCACAGGACGATACCAGCGGTGATGGCACAACCTCCACTGTGCTTTTTATTGGGGAGCTTATGAAGCAATCTGAGCGGTGCATTGATGAAGGTATGTTCATTTGAACCTATACCTTTTTCTATAGTTCAATATGACTGGATTTATAATATATCGATTACATCTGAAATATCACTTGCGCGTCTAGGAGAATTGTAAAAGCTTATACAAAGGAAGGTGAAGGATAGAGTAAAACTAGATTCTTTGATTATGTGTTATGCTCTCCCTTCTGTTAAACATGTGTAATGTGGAGATATTACGATGAGAAGTTGTAGCATGGCTCATTGTGTTTTCTAGTTACCTTGTCATGCATTTCTAGGCTAGTTTGGATCCTCACTGCACAAATTTAATCTTGAAAAATAAGGATATGCAGACCTTCTGTGCTAAGGTCACAGCACAAAATTGTCTTCAAGTCGTAAATTTGTGTAGGCAAAACCTTATCTTTATACGATAACTTGCTACTTACTATAAACTCAATAGTAACTGATTGTCATTCTTGTAGGCACTCATCCACGTTTTTTGGTTGATGGTTTTGATGTTGCCAAGAGAGCAACTCTTGAATTTCTCGAGAAGTTCAAGACATCAGTTGTCATGGGCGATGAACCTGACAGAGAGATCTTGAAAATGATAGCAAGAACTACTCTAAGGACAAAGGTAGGCGCAGTTTGTTTTCTTGCTTTCAAGCTTTCTTTACTTGGGCAGGTAACGTATAGACTATATAATATTTCAACATTTATAAAATCGACTATTTTGCAGCTGTACGAAGGATTGGCTGATCAGTTGACTGATATTGTTGTGAATGCGGTAATATTTTCTTTCTGATATTTGTTTTTCTTGGGAAGGTTCAAGTTTACTCATTGTATGAACATATTTGAATTTTCATTAAAATCTATGTTTTAGGTTCTATGCATCCGCAAACCTGATGAACCAATCGATCTTTTTATGGTTGAGATAATGCACATGCGCCACAAATTTGATGTTGACACACGTCTGGTATGTATTCATTTTTCTTTATTTCTCAAGATAGACTTATTCTGATCTTCATATTCCCTTTAGAAGAACAAGTTATTTTACCCAGCTAAGCTTTTGAACTGAGCAGCTTGCCTATCCATTCTTTATGCTAATACTAATCTCTGTATGATTCAGCAGACTAAAATGAATATGTTGATTTACATACTATACAGAATTCGTAATGGATACAATGTGACAATGCTTACCCCACTGCTTTGATATTGTTATTATAGGTTGAGGGTCTGGTCTTGGACCATGGTTCTCGGCACCCTGATATGAAACGCAGGGCAGAGAACTGTTATATCTTGACCTGCAATGTCTCACTGGAATATGAGAAAAGGTACACGACTTTTACAAATATGTACTTTGTTATGTTGGTTAACACATTCTTATTTGCCCTTTTGTGTTGATTTCATCTGCTCATGCCTCTAAGAAAACACGACTTTTTATAGGCTGTTAAAGTAACGTACTTAAAGCAAGCCATATTTGCTCTTCATGTATGCTACCTTGTCTGCCGTTAAGACCGGTTGCACACACTTGTACTTAGCTTAGTTCCTTTACTTGAAACTATTCCTATATTTGCCATGCATCATTGAAGGGAAACTGTTAACTGATATATACTCTTCTCAGTGAAATAAATGCAGGATTTTTCTACTCGAATGCAGAACAAAGAGAAAAGATGGTTGCTGCAGAAAGGCGCCAAGTTGATGAGCGTGTGAAGAGGATTATTGAATTGAAAAATAAGGTAGTTCACTTATTTCACCTGCAGTGCCTTTTTTCTGTACACTTCCAGAAAATCCTTCATATTGTTTCATGAATTTCAGGTTTGTGCTGGAAATGATAAAAATTTTGTGGTGATCAATCAGAAGGGTATTGACCCTCCATCCCTCGATCTCCTAGCTAGAGCAGGGGTAATGTTCTCTGATGGATCTGAACTACATACTTTCAAGCTTCAACCATTTAGATTCCTGCGTTTGTTTAGGATGTTTCTGAATGGAAGCATCATAACAGCTAATATTTGTTGTTAAATCTGTTCTTTCAATTTTTATTATTGGAGCTTATTCTTCAAGATGCTTTTTTACATGCTACAGATTATTGGTCTCCGAAGAGCAAAGAGGAGAAACATGGAGAGGCTTGTGTTAGCATGTGGGGGTGAAGCTGTTGATTCAGTTGATGATTTGACTGAAGATTGTCTTGGCTGGGCTGGGCTTGTCTATGAGCATACTCTTGGTGAAGAAAAGTACACCTTTATTGAGAATGTGAAAAATCCTCGCTCTTGCACTATACTGATTAAAGGTTGATTACTCTTGAACTATAATAATGATCTTTTTCCAATATTCTGGTTTGGTGGTGAACTTACTGTAAAGTCAATATCTCCAGGGCCTAATGATCACACCATTGCGCAAATTAAGGATGCTGTTCGCGATGGTCTAAGATCTGTTAAGAATACGGTTGAGGACGAAGCAGTTGTGCTGGTAAGCTAGAGATGGACAGAACTTCACGATCCACCTTGTGCACATTAAGTTTGGCTACATCTCTTGGTTATTTTAGATTCCATTATTTTAGTATACTTTACCAGCTTCTGATGCATAGGCCAAACAGCTATAATTACATTTTTAGCGCATCTTTGTTCATATAAGTGCAGAGTTGCCATTAGATGCATGTGTATTCCAAAGGTTGCTTATAAAATCATTTTTATTATCTTTTATTTTTGAAATGAAACCATGTTTATTATCTTCAGACTGCTTGATTCTTACATTGTCATTTGTCAACTGTAGGGAGCAGGAGCATTTGAGGTTGCTGCGAAGAAGCATCTTATTGACAACGTGAAGAAAACTGTCAAAGGAGTAAGTGTACTGCAATGTCAATATGCTTTAACTTCAATGTAGCAAAACATTGATATTCTCTCGACTTCTGAACCTTGGCAACAGCGAGCACAACTTGGGGTGGAGGCATTTGCTGATGCTCTTCTTGTCATACCCAAAACACTAGCAGAAAATTCAGGTCTAGATACCCAAGATGTTATTGTCGCTCTCCAGGTATGAACACATTTTCAGTGCTGCACCTCATCCTTAAATTGGAGGTCAGTAATTTTAACTGTTTCTGTGCTTTCTGAAGAATGAACATGATCGTGGATTGGTGGTGGGATTGAACCATCACTCTGGCGAACCAATTGATCCCCAAATGGAGGGCATCTTCGACAATTACTCCGTGAAACGCCAGATCATCAATTCCGGGTATGTAATTAAGTTATTCTTGCCTTATTTGCCCAACAACATCCTAAATCCTAACTGGTTTTTCTTTGGTGCAGACCCATCATCGCGTCACAGTTATTGCTTGTGGATGAAGTGATCAGGGCTGGCCGCAACATGAGGAAACCAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018808

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