BGIOSGA018811

From RiceWiki
Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018811| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018811, complete gene.| tag = OsI_184...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018811

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018811, complete gene.

LocusTag

OsI_18444

Ensembl Transcript ID

BGIOSGA018811-TA

Ensembl Protein ID

BGIOSGA018811-PA

Length

4113

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2929345..2933457

Sequence Coding Region

2932995..2933457,2932410..2932561),complement(2931044..2931313,2930827..2930948),complement(2930204..2930321
,2930017..2930109),complement(2929866..2929943,2929688..2929775),complement(2929345..2929424

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2929345..2933457 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2929345..2933457 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCACCTGTCTCTACGGGACCCAGATTTAGGCGGAGGAAGTCTAATGCACCGAGGGCAACAAGTCGAAAGCCGGACAGCGGGGTGCCTGTCGCTGCCGATGCCGATGCTGCGAAAGAGGGCGATGCGCCGGGGTCGGGGTCGACGACGAGGGTGACCCGTTCGAGGGCAGCAAGGTGCCGGCCGGGGTCGCAGGAGCCCCTTCCACCACCATCGGAGCGATCCCGATCCCGGAGGACGACGCTGGCCACTGATACGGCAGTGAGAGAGCGCAAAAGGATTCGGGCCAATCTCATTGAGGAGGAAAAACCGCTGACGAAGATGGAGGAGGTAGGGGGGGAGGAGATCTCGTCCGCACCGAGCTCTCCCCTCTGTGAGCCCTACTTGCCTGATGACCAAGAGATTGATTTCGACACCATTGATCTTTACAAGAAGAAATCAAAAGAATTCCATAAAAAAAGAGATGGAAATCCCTTAGCACGCTGCTCTGGATTTCTGATTGATTGGAATGAAACAACGAAAGTTGGTGTTGTTATTACATCTGCTGATATTATTTGCTCAGCATCATCCTTAGACCGTTGGTCTGGTGATGATGAATATTCTTATTCTGCTAAGGTCTTTGTGCACCTACTGGACGACACCACGGTGGAGGGGCGCTTGATTTATGCTCAGACACACTACAATCTTGCTTTGTTCGAGATTATAGTGGAATCCCCAGTTCAGATACCTAATTTTACTTTCAACCTGAATTATGCTCAACAAATATTTGTGTTAGGAAGGGATGAGAACTTGTGTCTAAGTATAAGTCATGGCAAAGTACAATACTGCAATCCGTTTTTGTGTGGTCGGCATCACTACATGTATGTTGATACTGCCACCCCTAAGTGTGCCTTGGGAGGGCTAGTCATTGACTTTGAGGGGAGCACGGTGGGGATTGCTTGTCAGACACATGCTTTTATTCCCTCCTCGATACTTATCAAGTGCTTACATCTGTGGCGGAAGATCCAGTGTATCCCCCGCCCTCAACTTGGGGTCAAGCTTTCAGCCATTAAATTTCTGGACCTTCCTCATATAGAGATGATATTACGCAAGATCCATATTTGCGATGGGCTCATTGTCGAAGAAGTGTCATCAGGGTCTACTATTGAGAAACTGGGAGTCAGAGTCGGCGATATCATTCAGCATTTAAATGGAGAATGGGTTTCTGATACAATTCAGTTAGAAGAAATGTTGCTGAGACTTTCTGAGGATCATTTTGACAAAGGAAATGGTCTCAATTCCACATTGGACATTAAAGTTGGTTTGTTTCACATACGCAATGGAGCTCGAAACACCATAAATTTGACGACAGTTGTCTCAGAAGATGGAGAAGTTGTTAAGAGGGGTTCATTCGCTGTTTCTGTCCCTACTCGGGAGGAGATTTCTGCTATGTACGCACTTCAGGAAGCAACTACAGGCATGTGA</cdnaseq>

Protein Sequence

<aaseq>MAPVSTGPRFRRRKSNAPRATSRKPDSGVPVAADADAAKEGDAPGSGSTTRVTRSRAARCRPGSQEPLPPPSERSRSRRTTLATDTAVRERKRIRANLIEEEKPLTKMEEVGGEEISSAPSSPLCEPYLPDDQEIDFDTIDLYKKKSKEFHKKRDGNPLARCSGFLIDWNETTKVGVVITSADIICSASSLDRWSGDDEYSYSAKVFVHLLDDTTVEGRLIYAQTHYNLALFEIIVESPVQIPNFTFNLNYAQQIFVLGRDENLCLSISHGKVQYCNPFLCGRHHYMYVDTATPKCALGGLVIDFEGSTVGIACQTHAFIPSSILIKCLHLWRKIQCIPRPQLGVKLSAIKFLDLPHIEMILRKIHICDGLIVEEVSSGSTIEKLGVRVGDIIQHLNGEWVSDTIQLEEMLLRLSEDHFDKGNGLNSTLDIKVGLFHIRNGARNTINLTTVVSEDGEVVKRGSFAVSVPTREEISAMYALQEATTGM</aaseq>

Gene Sequence

<dnaseqindica>1..463#897..1048#2145..2414#2510..2631#3137..3254#3349..3441#3515..3592#3683..3770#4034..4113#ATGGCACCTGTCTCTACGGGACCCAGATTTAGGCGGAGGAAGTCTAATGCACCGAGGGCAACAAGTCGAAAGCCGGACAGCGGGGTGCCTGTCGCTGCCGATGCCGATGCTGCGAAAGAGGGCGATGCGCCGGGGTCGGGGTCGACGACGAGGGTGACCCGTTCGAGGGCAGCAAGGTGCCGGCCGGGGTCGCAGGAGCCCCTTCCACCACCATCGGAGCGATCCCGATCCCGGAGGACGACGCTGGCCACTGATACGGCAGTGAGAGAGCGCAAAAGGATTCGGGCCAATCTCATTGAGGAGGAAAAACCGCTGACGAAGATGGAGGAGGTAGGGGGGGAGGAGATCTCGTCCGCACCGAGCTCTCCCCTCTGTGAGCCCTACTTGCCTGATGACCAAGAGATTGATTTCGACACCATTGATCTTTACAAGAAGAAATCAAAAGAATTCCATAAAAAAAGAGGTACTATTCAACTCCCCCTTTCCTTATACAGTACTACCATTCAAAACTAAGCGCTATGTTCATTAAATGTGCCATGACTCATCATTTAATATTTAATAATGTACTAATCTAGTCATGACTCATCTCATAATGTTAGCTATGATATTCAATGATGTAGTAAGTTACAAGGTGGGAGAGATGATCTATGCATTGATGTTGGTCTTATTTTACAGCTCATCAACTTAGCTTTCCTACACTGAATACGGATGTATCTTCTTCTTGTCTGCTTCACCCAAAGTTACTCGACATCCGTGAATCTGCAACAAAGTCGATACTTGGTGCTGCAAAATATGTTCTGGGTCTTTCATCTTGCATTGGTACACAATTTGTACATCTCTTATTTACTGCTATAGAAAATTTGCTATGTTTGATAATATTACGTATATATTCGCAGATGGAAATCCCTTAGCACGCTGCTCTGGATTTCTGATTGATTGGAATGAAACAACGAAAGTTGGTGTTGTTATTACATCTGCTGATATTATTTGCTCAGCATCATCCTTAGACCGTTGGTCTGGTGATGATGAATATTCTTATTCTGCTAAGGTATGTTGCTGAAGGTTGAGTTTATTTGTTATAAAGCTAGGGAAAATAGAACTAAGAAAACACCGCCTCATTCACTTTGGTACTAACACAAAAGAAATGCTATTTGTATGCAACATTTCATAAGTCATAATGCATGCACATAACATTGTACACAGTTCTCATTCACTTCATACATCCAATACTATATGTTGGGCACTTGGGCTACTATTTATTGTTTTTATAGAGATAGTATACTTCACGTGAACTCTCTATTTCTTACTAATGTTCTGAGACCAGTTGGGAAGGTCCATCATACTAAAAATAAGAATGTCTGCGATGACCACCTCAACCAGCATAATTTGGTTTCCAGTGGAGAGCTCAAGTTCTTTCCAACCTAGAAAATTAGTCCGTCATATTGATAAGACATTCTCATTGCATGGTTTACTTGAGTATATATGTAGTTCCACATATTTGCTTGGGAAGGAAATTGTAGAAGACAAAAAAAAAACAATGAAATATTGTAATTCGTTTGTGCTTCACATTGACATCGAAATGCTGAACACACTGAATTTTGTGCAAAGAGGATACTATTGATTGAAGCAGTCTTTCCTAGTTCTTGTTTTGTTCCTAGATCTGATTGAGTAGTGTAGAGTGCGAAACAATGCCTATAAATAGGATTTCTAGGTGGCATGTTGATCACTAGGTTTGAGGACCAGGGCATTGATTGACAACACAAAGAACAATGTCCAGCCATTGTGTAACATTTTTATCACTTCCAAATAGGGAAATACTACCTCCATTCCAAAATATAGCAGCTTTTGGCTATGCATCTGGACAATATTTTGGGATGGATGTAGTTACTTATTTTCTTCTTAGCCTTATTATATTTAACTCAATCTCAAAATCGCTTGATGCTTCAAATATTTCCCTACTATTTGCGGTGCAAAGTCTCTAGTATCAATTTAAATGCTATATATTTGAATTTGACTCTTCCAGAAAGCATACGCAACATTTAGCCTTTTGTCTAAAATGGTCATGATCATTTGTTTTCGGTCCTTTTGTCATGTGTTCCCTAGATGATTTAATAATTTTATACATTTTGCAATAAATGTTTTAGGTCTTTGTGCACCTACTGGACGACACCACGGTGGAGGGGCGCTTGATTTATGCTCAGACACACTACAATCTTGCTTTGTTCGAGATTATAGTGGAATCCCCAGTTCAGATACCTAATTTTACTTTCAACCTGAATTATGCTCAACAAATATTTGTGTTAGGAAGGGATGAGAACTTGTGTCTAAGTATAAGTCATGGCAAAGTACAATACTGCAATCCGTTTTTGTGTGGTCGGCATCACTACATGTATGTTGATACTGCCACCCCTAAGGTATCTTCGTTTTATTATAATCATTTTAATTTTGAACTATATGGTATACGATTTATATCTTTTAATATAGTTAATTTTTGCTGTAAATATTGTAGTGTGCCTTGGGAGGGCTAGTCATTGACTTTGAGGGGAGCACGGTGGGGATTGCTTGTCAGACACATGCTTTTATTCCCTCCTCGATACTTATCAAGTGCTTACATCTGTGGCGGAAGATCCAGTGTGTTTTCTTTTCATTTTTCTATAATATTGCGAAAATATTTTTGTTCTTTTTTTGTTGTTATTCAAAGTTGGATTATAGGGTTGACCTTCCTAGATTAAGATAGATGACCTAGAAGACTTTTTAATGTATGCTGTAACAGTATCATGTCATGCGAAAACATAATGTGTGATTTCACTTGTATTATTGTGAAGGTATCTCTTATTGATAATTTTATATTATTTGCTGCAAATCAATGACCATAAGATAACTTAGCAATACAGTTCTTATTAGTTTAATGCTTATTGTTTAAAGGAATCATTTCAAAATTTTACTAAAAGATCATATATAAAATTATGTAGGGATTATAGTCTTGGGCGGACATGATTTTAGAATACATCGTATAGCTCTGTTAAACTGCTTTTTTATACATATTATTTAAATTTCAGTCTAAATATTTTATTTTACATGCTTTATTCTGCTTTGTACCTCCTTTTGAATTCTAATGAACAATTATCTGGCACAGGTGTATCCCCCGCCCTCAACTTGGGGTCAAGCTTTCAGCCATTAAATTTCTGGACCTTCCTCATATAGAGATGATATTACGCAAGATCCATATTTGCGATGGGCTCATTGTCGAAGAAGTATATAGATTGTTTACTATTGTAGATTTTGATTTACTTAAGATGTATGCCCCTGTCATGTAGTAATTCTTATATCAACTGAAATTAAATATAGGTGTCATCAGGGTCTACTATTGAGAAACTGGGAGTCAGAGTCGGCGATATCATTCAGCATTTAAATGGAGAATGGGTTTCTGATACAATTCAGGTGAAAATAATTTTTTGTATGGCATTTGGATACTTTATGTTGGCTTCTGTAACCTTTTTATTGATTGTATTAGTTAGAAGAAATGTTGCTGAGACTTTCTGAGGATCATTTTGACAAAGGAAATGGTCTCAATTCCACATTGGACATTAAAGTATGTTTATTGTTTTTAACTGTGAATTGCTTTCTTTGTGTCTTTTTGTGTTTTTTTATTGAATTACTCAAATATGAGTTGATTTTGTAGGTTGGTTTGTTTCACATACGCAATGGAGCTCGAAACACCATAAATTTGACGACAGTTGTCTCAGAAGATGGAGAAGTTGTTAAGAGGGGTATAAATATACACAAATATTTTTTTTTGTATAAATATACACAAATATTTTTTTTCTATTTTAATATTGAAAAGAGGATATTTGTATTGCTAGTATATTTTATAACAATGATATACACCTAAGACTTGCATATATACTTCTTTTCTGTTTACAAAGATACAAGAACATCGGCCCAAATGTACTTGAATGCATACTTTCATCTGTTTACAGATACATAATATTTGCCTCAATAAACCACTAAAATAGTTTATTTTACTGATTAGGTTCATTCGCTGTTTCTGTCCCTACTCGGGAGGAGATTTCTGCTATGTACGCACTTCAGGAAGCAACTACAGGCATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018811