BGIOSGA018816

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018816| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018816, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018816

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018816, complete gene.

LocusTag

OSJNBA0077J22.2

Ensembl Transcript ID

BGIOSGA018816-TA

Ensembl Protein ID

BGIOSGA018816-PA

Length

6633

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2879638..2886270

Sequence Coding Region

2885853..2886270,2885423..2885566),complement(2885189..2885343,2884243..2884518),complement(2884003..2884130
,2881169..2881286),complement(2880953..2881045,2880771..2880848),complement(2880575..2880655
,2880101..2880163),complement(2879638..2879718

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2879638..2886270 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2879638..2886270 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGGTGGAGACGCGGTCGAGGGCAGGAAGGGGGCGGCCGGCGGGGTCCCGATCATCCCCTGTGCGCCGCCGGGACGGCGGCGTGGCTGCCTCCCCTGGCTCCCAATCGGCGGCATCAACAGAGCGGAGGAAGAAGAACCGAGGTTCGAAGAGGAATTTGTCCGATGGGAGCGGTGAGGACGGGAGGCCGGGTAAGAAGATAAATCTGGAGGAGGAGGAGTTGGAGGAGGAGAGGATGCCACTGGAGGACGAGGCCTCTGCTTGCAGTTCTTGCAGTTCTCCGCTATGTGAGCCATACATACCTCGAGTGGTGATTGGATGCAATGCTAAGGGCAAGGAGATTTATAAGCCAATCGAATGTGATGAGTTGAGGGCACTTGATCTGTGGGAAGCGAAATACCAGGCAAAAAGAGATCGGCAAATGAACTTGTGCACTCTAAAACCATGCATACCTCCCACATGCCTAGTCGATCCGAAGCTTCTTCACATCCGTGAATCTTCAACTGAAACTGTTCTTCGTGCTGCCAAGTTTGTCATGGGTCTTTCATCTTCTGTAGATGGTAATCCACTATCACAGTGTTCTGGTTTCATTGTCGATTGGGATGACAAGAGCAAGACGGGAATTATCATGACATCAGCACTTCTTATTTGCAAAAAGTCTTCACACACAGACGATTGGAAATATGCAAGCCAATATGCTACTGATGCTCAGGTTGTTGTGCACTTTGTGGATGGTACCACTGTAGAGGGTCAATTTCTCTATTGTCAGGAGCATTACAAGATTGCTTTCTATAAGATTGTGCTGGATAAACCCACTCACTTGCCCTCTTTTAATAAGGGAGTAAAATGGGCTGAAGAAGTCTTCATACTGGGAAGAGATGGAAGTTCACATCTGAGGATAAGCCATGGTAGGGTGCAGTATTTAAATGCACATGTGAATGAACGCCATCACTATATGTACATTCATGGTGTCGATGCAGCTTCTGAGTACTACAACGGGGGGCCAGTCATTGACTTCAGAGGAGATGTTGTGGGCATGTATAACCTCAGTACAAGGGGGTCTTTTATTCCTTCTAACATCCTACTTAAGTGCTTGCAGTTGTGGAAGAAGTTTCACTACATCCCTCGACCACATCTTCAGTTGAAGCTCTGGGGCATCAAATTTCTTGAGCCTGCCCATATTGAGATAATATCTTGCAAGTGCAACATTGATGATGGTCTTATTGTTGAAGAGGTGTCAATAGGTTCTTGCGCTGAGAGACTTGGGGTTAGAGTTGGTGATATTATTGAATGCTTCAATGGAAAATGTATTTCTTCTACTGTTGAGTTAGAAAATATGCTGCTGCAGATCTTGGAGGATCATTTTGATGAAGGAAATAGTCTTGATTCTACAATAGATATTGAGATTGGAGTATTCCACACACGCAAAGGTGTTCGGAGCACACTGAATTTGACAACAAATGTATCTGACAAGGGAGAAGTTGTTGCGATTTACCCATCACCGGAGAAAAGATTTATACAAGTTGTCCAATTGACCAAGCAGATCCAGGTTCTCCCCATTCTCCCACTCGCGAAGAGAGGACACCCACCTGAGTATCCACCAGCTGGACCAAGCTTCGTTTTAAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPVETRSRAGRGRPAGSRSSPVRRRDGGVAASPGSQSAASTERRKKNRGSKRNLSDGSGEDGRPGKKINLEEEELEEERMPLEDEASACSSCSSPLCEPYIPRVVIGCNAKGKEIYKPIECDELRALDLWEAKYQAKRDRQMNLCTLKPCIPPTCLVDPKLLHIRESSTETVLRAAKFVMGLSSSVDGNPLSQCSGFIVDWDDKSKTGIIMTSALLICKKSSHTDDWKYASQYATDAQVVVHFVDGTTVEGQFLYCQEHYKIAFYKIVLDKPTHLPSFNKGVKWAEEVFILGRDGSSHLRISHGRVQYLNAHVNERHHYMYIHGVDAASEYYNGGPVIDFRGDVVGMYNLSTRGSFIPSNILLKCLQLWKKFHYIPRPHLQLKLWGIKFLEPAHIEIISCKCNIDDGLIVEEVSIGSCAERLGVRVGDIIECFNGKCISSTVELENMLLQILEDHFDEGNSLDSTIDIEIGVFHTRKGVRSTLNLTTNVSDKGEVVAIYPSPEKRFIQVVQLTKQIQVLPILPLAKRGHPPEYPPAGPSFVLN</aaseq>

Gene Sequence

<dnaseqindica>1..418#705..848#928..1082#1753..2028#2141..2268#4985..5102#5226..5318#5423..5500#5616..5696#6108..6170#6553..6633#ATGGCGCCGGTGGAGACGCGGTCGAGGGCAGGAAGGGGGCGGCCGGCGGGGTCCCGATCATCCCCTGTGCGCCGCCGGGACGGCGGCGTGGCTGCCTCCCCTGGCTCCCAATCGGCGGCATCAACAGAGCGGAGGAAGAAGAACCGAGGTTCGAAGAGGAATTTGTCCGATGGGAGCGGTGAGGACGGGAGGCCGGGTAAGAAGATAAATCTGGAGGAGGAGGAGTTGGAGGAGGAGAGGATGCCACTGGAGGACGAGGCCTCTGCTTGCAGTTCTTGCAGTTCTCCGCTATGTGAGCCATACATACCTCGAGTGGTGATTGGATGCAATGCTAAGGGCAAGGAGATTTATAAGCCAATCGAATGTGATGAGTTGAGGGCACTTGATCTGTGGGAAGCGAAATACCAGGCAAAAAGAGGTTTGTTCTCTCTCTTTAATTTAGTCCTGCCCTGGGAATTTTGAAGAAAATTAACAAGTTGTTCTTGTGGATAAAAATGCAAAGAAGGGGAGGACTGAACATGTGTTAAGAACTTATTTCTTTAATTTAAGGGGAGGATTGAACATGTGTTAAGAACTTATTTCTTTAATTTAGTTCTGCCTGCAGTAAGTTTTTTTTGAAATAATGAGTGCTTCTCTCCTTTCATGTATACTAACTGAGTGTTCAAAATCACTATCACTGACTCAATTGCTTCCCTTCCATGTAGATCGGCAAATGAACTTGTGCACTCTAAAACCATGCATACCTCCCACATGCCTAGTCGATCCGAAGCTTCTTCACATCCGTGAATCTTCAACTGAAACTGTTCTTCGTGCTGCCAAGTTTGTCATGGGTCTTTCATCTTCTGTAGGTAAACACCATCCTGTCTTATTCATGAGGATTAAGGTTTACAAATCTTATTGACTGCTAATATGTAAATGCATTTTCAGATGGTAATCCACTATCACAGTGTTCTGGTTTCATTGTCGATTGGGATGACAAGAGCAAGACGGGAATTATCATGACATCAGCACTTCTTATTTGCAAAAAGTCTTCACACACAGACGATTGGAAATATGCAAGCCAATATGCTACTGATGCTCAGGTGAGTTTGCATGGGAAATACAAATCTGTTTCCAAGTTCTAGACTATTACATTTTGCCAATACAATGCTCCATTCATATGGTGGGGTGGAGGGAAGGGAGGGGGGGGGGGGGGCGAATAAACTAGATGATCCATACCTGCGTGCCTACGTATCAATGGTTCCCAACCAATAACTACTACTCTCCTTATGTACCATTCCTACGTAACTCAACAGAAGAGAGTAACAAGTTCTCTCCCTATGGACCATTCCTACGGAACTCAACAAAAAAGGGTGAAAGTAACTAGTACTTGCCCTATGGACAATTTCTATGTAACTCAACCGAATAGTGAGAAAGAATATCAATGGAATATATGGGTTGCTTATCCTAAAAAACCGTCTTGCTTTTACTTATGAAAGATTGGCTCAATAGAGTTACAAACAATGGATGGAGTTATGCGGAAACCATTAGATTTATATTTTTTGTGCCTGCCATGGGTGGTCTTTGTTTTCCTTTCTATAGACAACCTATTTATCTTCCTTCTCGCTAGTCGCTATTGGTCCCAATCCTCAGCTCTACTATCTCATATATCTCGATGATGGTTTTCTCTACTATAATGTGATCATGTGTATCTGGTGCTGTTTAGTTTCCATGCTAACCAAATATAATGTCATTTTGTGCCTATTGTTTCAGGTTGTTGTGCACTTTGTGGATGGTACCACTGTAGAGGGTCAATTTCTCTATTGTCAGGAGCATTACAAGATTGCTTTCTATAAGATTGTGCTGGATAAACCCACTCACTTGCCCTCTTTTAATAAGGGAGTAAAATGGGCTGAAGAAGTCTTCATACTGGGAAGAGATGGAAGTTCACATCTGAGGATAAGCCATGGTAGGGTGCAGTATTTAAATGCACATGTGAATGAACGCCATCACTATATGTACATTCATGGTGTCGATGCAGCTTCTGAGGTACCAATAGATTGCATTTCCTATTTAGGTTATATCTCGTATAATTCATATTTATTCATTTTTATTCATTTTTTACATGTTACTAATTTGAACATTGTCAATTTAATTGTAGTACTACAACGGGGGGCCAGTCATTGACTTCAGAGGAGATGTTGTGGGCATGTATAACCTCAGTACAAGGGGGTCTTTTATTCCTTCTAACATCCTACTTAAGTGCTTGCAGTTGTGGAAGAAGTTTCAGTATGTCTTCTTTTCTCATTTTGTCATGATGTTGCCAAATTAATTTATTACTAATCGAGCGTGTTCTGCAATTAAAAAAAAGAAGCTTATTGATTATATTGGTTTAATCTTCATAAGTATTGTTCAATTTGGGGAATTTTTCTAGGGTTAGCCTACTCAGCTCACCCCTTCCTCATCTATTCTATTAGCATAACACTTTACAGATAGGTCCTTGGTACGATACATATTTACACCAACACTCCCCCTCAAGATGGGCAAAAAATATCAATCATACCCATCTTGTTACATATTGATTGAATCTCACNTAGGACCTAACCCCTTTGTTAGACAATCAGCTAGTTGTTCACATGACTTAATATACTCCAACCTAAGCACCCCGCTATCAATCTTCTCCTTAATGAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATAGGCTTGGATGTACCATTAGCGATTTGGATAGTTTCAGAGTGGATATAAGGGGTGTATGATGTGAAAGTATTATGCAATCCTGTGACATGCTTTGATGCTCCTGAGTCTATGATCCAATCTATAAGATGTCTATATGTAGATGCAAGTGCCTGTGCCTGAGTACCTTCGCCCACTTGGGCGTAGTTGGCGAAGTTACCAAAGTGAGTGGTGGTGTTAGAGCTCTCATTGGTCTTGTTCTTCTGCCATTCCTCCCATTGTGTCACTTGTTCACCTATTAGGGTAACAGCTTTCCCATCCTCCTTAACTGCATTGGCCTGAGGAACACCTCTGCCCCTACCACGACCTCCAACACGACCTCCACGATCACCTCCTCTACCACCACGATTTCCCCCAAAAACACCACGGTCTCCTCTAAATCCACCACGAGTTCCACCATGCCCTCCTCGAATCGATCCCCTACCACCAATGTTCCGGGAAGTGGGACAATTGTAGCTCACATGACCCACTTGCCCACAATTGTAGCATTCCCTATTATCAGCTGCAATGTATGCTGATCTTATAGGATTTGTACCTCTCATCAANCTCAATCTCATCTCTTCTTGCACCATTGCTGAAATGGCCTCTCATAGTGGGCAATGTAGCTTGGTGGAACATAGCTGCTCTCCTATCCTCAAACTCCTTGTTCAACCCCTTCAAGAAATGAATGACTCTTCGCCTCTACAGCCATTTATTTCCAATCACAATGTCATCCTCATGTTTCAATTGTAGGGGATCATAGTGATCAAGATCTGCCCATAACTGTTGCAGCTCGCTAGCGTACTCTTGGACTGTTCTCCCCTCTTGCTTCAAATTCTCCACTTTGTTTTGAGCCTCAACCATCATCATTACATTTCCCTCTCCTGAATACATGTTGCTCAGCGTCTTCCATACAACTGCAGCATTCTGGATAGCTTCTATCATCCTGCCAATAGAAGGAGCCACCGAGGTCATCAACCAAGATACCACAGTGGAATTTGTAGTATTCCACGTCCTCCATGCTTGGCTCTCCTTATCAGAAGGTTCTTCACAACTCTCTAGTAAAAAATGATCCACCCCTTTTGCTCTCAACATCAGTTGGGCTCTCCTACACCAACTCAAATAATTTTTGCTCCCCTCCAACCTCAACTCATTTGGCATCAATTCTAGTTTCACTTCGAATCCCCCTGCTACACTCTTCGGACCTATCATGCCCATCTTCAACAAATTCTCTAGCAAATCTTTCATATCACCCTTAGTAACCACCGAGGAGGCATCTACAACCTCCTTTCCAACCCCTGAAGACATTTCCCCTCCCCCTTTCTAAGCTTCCTTAGTCCTCACCTGCTACTGCTCTCTGCTCCTGTAATTTTTCAGCATACAAGACACTACCAACAACAAGCAACAGCAACCTTCTCCTCTCTTTTCCCTTCTCTCCACAGCAGCAGTCCACCAAACAAGCAATAGCAGCAGCAAACAGCAGTCCCTTCTCTCCACAGCAGCAGCAAACAGCAAGCAGTAGCAGCCACAAATAGCAAACAACAAGCAACAGCAGCAGCAAACAGCAGCCGGTGCCCTTCTTGTCGTCCTCCGTGCCGGCGCAGCAACCAGCCGCGGCGGGGTAGCAACAGCAAGCAACAGCGGCCAGCCGGCTCACCTGGTCGCAGCTCCGCCACCACTCCTGCGCCGTCGCCCCCACGCCACGGCCGCGCGACCGGCCGACCACCCCGGCACGCCGCTCAGCCGCTGTCGCCGTAGGTCGCGCCGCCACCTCGCGAGTCCCAGCGGTCGCCTCCACACCGTCTTCCACTTCGTCCTGCTCCGGCACGAGCGCCGCCGCCGGCTAGGGTTTTGCCGCCGCTGGTCGCCAGGAGCTCGGCTCTGATACCATATTGTTCAATTTGGGGAATTTTTCTAGGGTTAGCCTACTCAGCTCACCCCTTCCTCATCTATTCTATTAGCATAACACTTTACAGATAGGTCCTTGGTACAATACATATTTACACCAACAATAAGATAGTGGGAGCCATCCAACTAGAATATCAAGGCTGTCCAACTAGAATATTAAGGCTGGTTTGGATTGGAGACAGGAACTTCAATAATAGCATCTAGATGTTTTGTTTAATATTGTTTTTTGGCCGCACTATTAATATATGGTTCTAACTAGTAGAAGTTCCACCCTACCAAATTCGGTAGTGCCAAAACCTTCCCATAATATTTGTAATACGATTGTTTGTACAGCTACATCCCTCGACCACATCTTCAGTTGAAGCTCTGGGGCATCAAATTTCTTGAGCCTGCCCATATTGAGATAATATCTTGCAAGTGCAACATTGATGATGGTCTTATTGTTGAAGAGGTAAATATTGTTTATTGCTGCTATTTTAGGGCTCTTGTTATTGTTGCTTTGGGCTTTCATTCTCTTTTCTTGAAATGCCTACTTTTGCATATTATGGAGTAACTATGTTCAATTTTATCATAGGTGTCAATAGGTTCTTGCGCTGAGAGACTTGGGGTTAGAGTTGGTGATATTATTGAATGCTTCAATGGAAAATGTATTTCTTCTACTGTTGAGGTAATATGTTAGTATGTTTCTAAAAGGTTTGTTAAGTATCCTACAAGCAAAATAAAAGTAGCATTACATGATGTTCTAATATAATTTCTGATTGTTGGTTTTAGTTAGAAAATATGCTGCTGCAGATCTTGGAGGATCATTTTGATGAAGGAAATAGTCTTGATTCTACAATAGATATTGAGGTAAGTTCACTTTATGTTTCTAACACCAAATTGCTTTATTTGTGTTAGTGCCTTAACATGAGACAATAATTAGCAAATTATTGACTCTAAGGAATATATTCTATCATCTTTATAGATTGGAGTATTCCACACACGCAAAGGTGTTCGGAGCACACTGAATTTGACAACAAATGTATCTGACAAGGGAGAAGTTGTTGTAAGAGGTGTGTTTCATGCCCTTCACTTCAATTCTGGCCCTATTTTAATGATAATGCCAAGGGCTTCTAAATCTTGAGTTTGTTGCCCAACTCTAAATCTAAGTTTTACATACATACGGTGCACTATACCCAGTATGGTAGAGATCAGATGGATATTTTGGAAATATAGGTAGACTAGAGTACTAGACAAGATTTTAGTGTACTTGGGGCACTATGGCTTCATATAATATATGATCTTGAAGCATTTGAGTTAAATATTTCTTGGACTACAGCATTCGGGGTTGATGTCGTGTTGTGCTGTTCTATTTTTCATTTTTTTCAACATAAAAAAACTGTATCTCTGAGCGCACCTTTTTAGTTGAAATCATAAAGCATTCTCATTAGCAAAGATTTTTATTATTATTTTTTAGGCGATTTACCCATCACCGGAGAAAAGATTTATACAAGTTGTCCAATTGACCAAGCAGATCCAGGTCAGCTAGCTTTTCTTTGTCTTTTGTAACATAATATGTTGTTGCCAATTATATTATTTATGTCTTGTGCATTTTATGGTAGGTTATTAGCCAATTCTATGATATATTTTCAGTAACTCTGGTCTAAAAGGTTAGTTTTTTTGGCCAGACGATTCTCAAATCTCTCTCACGGGTAGAACATCATCATCACCAAGATCACTTGACCATGAAGATTTAGGTAGGGAGTCTCTGCCTGAATTGCATCATTGCATGAGATGTGATACGATCTGGTGTCATTCATTGTTGTTGTTACCTGAACATCTGTTGAGATTTTATCTTCTATAAATTGCTGATAAGTTGAGAGCATTGTATTTTACTGAAATATGGTACTATTCATTTTCAGGTTCTCCCCATTCTCCCACTCGCGAAGAGAGGACACCCACCTGAGTATCCACCAGCTGGACCAAGCTTCGTTTTAAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018816

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018816&oldid=47572"