BGIOSGA018817

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018817| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018817, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018817

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018817, complete gene.

LocusTag

OSJNBA0077J22.1

Ensembl Transcript ID

BGIOSGA018817-TA

Ensembl Protein ID

BGIOSGA018817-PA

Length

5555

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2872303..2877857

Sequence Coding Region

2877824..2877857,2877585..2877738),complement(2876253..2876415,2876101..2876166),complement(2875888..2875985
,2875266..2875383),complement(2874969..2875178,2874477..2874553),complement(2873948..2874038
,2873089..2873154),complement(2872932..2873009,2872670..2872771),complement(2872303..2872410

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2872303..2877857 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2872303..2877857 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAAAAATATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAGAACTCAGATGCAGCGATCATGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACGTTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAAAATCCCCGCCTGCAGAGTTGTATGTGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCGCAGAATCACTCCATCACTTCCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAA</cdnaseq>

Protein Sequence

<aaseq>MSLLSNSLLLQGRLRHAAASAVAAAAMGRRGVATSTEEYNRRNYAKNISEYNTVFGSLTAQRRHYLLRDAYDDMMLDGVQPVRDTFHNLIVGAMKGSRLQDAFYFRDQMKEMGLQPDVNLYNFLISTCGKSKNSDAAIMLLEEMKAHGVKLKGETYVCLLNALAATGRTDQVYAIVRDMTAAGLGLNKFCYAGLITAFKNKAPTTEETMTKIVEFVQQSKGWKNVERVSKDSSENIMMNVSEEELYNLPTAEYVHRQAFVYKQMTIYHVAIHACADLKSKETLEVLLDMLIKDGFTYDAFIAMQAMRCYLQCGDIDSAVKIFEEYTSSKSPPAELYVTLAEGAMIGHTPRGMQLAQETIEKMTSRNFFLNARMGTDLLLAASGEKTGGYTIANYVWDLMQNRRITPSLPAVEAYYKGLKEREIPSDDPRLMNVSRVLDNLSIRFGPRRNSNAQA</aaseq>

Gene Sequence

<dnaseqindica>1..34#120..273#1443..1605#1692..1757#1873..1970#2475..2592#2680..2889#3305..3381#3820..3910#4704..4769#4849..4926#5087..5188#5448..5555#ATGAGCCTCCTCAGCAACTCCCTCCTGCTCCAAGGTACACCCGCCCTCCATTTCTCCTAGGGCCGAGCCCCTATGCGTGGTCCAAGATCTCCTTGACCTTTTTGGATCTGGCTGTGCAGGGCGGTTGCGGCATGCGGCGGCTTCAGCGGTGGCGGCGGCGGCGATGGGGCGGCGCGGGGTGGCGACGTCGACGGAGGAGTACAATCGCCGGAACTACGCCAAAAATATCTCCGAGTACAATACCGTCTTCGGGTCCCTCACCGCGCAGCGCAGGCATGTCTCTCGGTTCTTGCATGCCAACTGTTCGACGCAATGCCGAGCGCTGGCATGCTTGTTGAGATGGCTTAGTTGTGATTATTTTTTCCTGCTTCCTCGATGATTTAGTTTGTACAAGAGCACAACGCTCGCTAGCCTAAATGTGGCCATTCTGCAACCGGGCATGCTACCGGCCAGAATGCCAGATGAACACAATTATACATGGTGTCGATTGTAGACCATTGTACTATTTTGCACACAAGGATTTTTAGTGCTGTACAGGAAGCATTCTTGTTTCTGGTGGCTGTCTTTGTGCTGAATGTAGGTTGATTCACTCGTCTGTATTTCCTCCAGTCTGTCTCAATACAATACGCCAGTGAGCATGGGCAGCTCTAGTGCCACAGTTTGACCCTAAGTACTTATCACTGAGCCTAGGAAGCTAGAGTGCCTTAGTTTCACCTGAATTACTTGCAAACCATCTAAGTTCAGAAGTTAGTACACATGTTTGGTTTGTCAAGTTTGTAGCTTTCTTGACCAAAATATGCACATTTTATAATGTCAACTTCCATCTTGATTTTATAAGATATATCATATATGCTCAATGCTTTTTTCTTATACAATACTCCCTCCTTCCCAAATTGATTATTATATAATGGAATTCAAAATTTCTCAAATTGATCATCATATAACTACATGAACACAGATTTCATCAGAATACATTTAATGCAACATGGGAGAATGTGTGCATGCTAAGGAGTAATTGACATGGTGTTTTAATCGATGCATGCATTGTGGGAGAATGTGTGCATGATGTCTTGATTGATGTGTTTTAAATTATAAATTATCCTTGGTTTTGGTGCATAAACATATATGATGATCAATTTGGGAAGGAGGGAGTATTTATCAGTACATTTATGCAAATGGTGTATTTGGCAAACACTTTTTCACCTTATGTTTGCCACATTAAGCTATATCTTTTGGTTGATAGCCATTCTTGAGAATTTATTTATGTAGCTTGGACTACCAACCATTTGATGCCCTATGTTGATACGTCCATGTGTTTTGTTCTGCATGATTGTGCCATTGTGAGTCTTTGTTTTGTCGGTAGCAGTTCCATGGTAGTAACCTCTGTTTGCTTAGGCTCTATTCTTTATCAAGTCTGAACAGAACTTTTGCATTGTTTTTAGGCACTACCTATTGCGTGATGCTTATGATGACATGATGCTTGATGGGGTTCAGCCTGTGCGGGACACATTCCACAATCTCATAGTCGGTGCCATGAAAGGCAGCCGGCTACAAGATGCATTCTACTTTCGTGATCAGATGAAAGAAATGGGTTTGCAGCCTGATGTTAGACCGTGTCTTCTTTGAATTAATTTCATCTCTTGTTTAGGGTTTTGTGAGATTGGTTGGGCTAAAGGCATTATATTTTGTAGGTTAACCTTTACAACTTCTTGATCTCCACTTGTGGGAAAAGCAAGAACTCAGATGCAGCGATCATGGTTAGACAATAATTGAGTTTTTGTTATTGTGGTCATGTGGTGCTGTTCTCCTATTTGGAATGTATTATCTTTGTTCCTATGCTCACTAATGCTTTCATCTTGCTACCTGTAAAAGCTTTTAGAAGAAATGAAGGCACATGGCGTTAAGTTGAAAGGTGAAACATACGTTTGTCTTTTGAATGCACTTGCAGCAACAGGGCGTACAGATCAAGTGTAAGGGTTCCTCAACATTCTTTTGCTCAAACAGTAGATCACGGCAACAACTGAGGCTGAAATATAAAATCGTTTGGTCTATACACATTGTGGTTCACTATGCATAGCATGATTTCATGAAGTACTGAATACCATCTAGCAATGAATAAGCCAAGGCCTAATTGAAATTAATAACTCATTACCTTTGTTATTTCTGTTCACTTCATCCGAACTGCTAATCACTCTATTGAATCTGCATGGATCTGCCTGATTGAGCATGTGAGGAAAAAATGTAGAAAGATATTACAAAATGTAAAATCATATATAACTTATGTTTTGAATTTAAGAATATTGGAATTGTTAGTACCAATGTAACCGATCTGGAGGTTGCAGTACAATTAACTTGCTGTTACTTCCATGCCAATACATCCATATTAATAGAAATGTTACTTAACGTACTGCAGTTTCTACTTTAACCATTTACCCTTTTGTGAGAAACTTCTCATAAATATTTTGTTTTGACAGGTATGCTATAGTTCGTGATATGACCGCTGCTGGGCTTGGATTAAACAAGTTTTGTTATGCTGGACTAATAACCGCATTCAAGAACAAGGCACCAACCACTGAGGAGACTATGACAAAAGTATGTTTTGCATACATGGGCAGTTATTAGATGGATGTATTTAACATGTTCAAACAGTTAATTTGAACTACAATTTTTTTCTATCAGATTGTCGAGTTTGTTCAGCAGTCAAAAGGTTGGAAAAATGTTGAAAGAGTATCAAAAGATAGCTCCGAAAATATAATGATGAATGTGTCAGAGGAAGAGCTTTATAACCTGCCAACAGCTGAATATGTACATAGACAAGCATTTGTCTATAAACAGATGACAATTTATCATGTTGCTATCCATGCTTGTGCAGACCTGAAGAGCAAAGAGGTGTGCTTATTTTGCCTTTGTGTTACCTTTTTTGCATTAACTAATACTCCCTCCATCCAACAATACAAGCATTTGAATTTTGTCCTAGAATATAAGCATTCCTACACTACTTGTCACATGAATCGCCTCTCAGTTCTCAATCTCTAATACAAATTTCTTCCTATATTACACCCCCCCCCCAACCATCTCCCATCAAATGAGGGGCACTAAAATCTTTTCTCCTCAACCTTATTTGCTAAACAACCTAGAAATGCTTATATTGTTGGACGGAGTGAGTTCGTGGTTGCTGTTCAGCAGCCTCGACAGTTGACATAAATGTATGCTTTCGCATACCCTACTGTTGCCCAAAATCTTCAACATTGAGTTATATGTCCTAGTTCCATGAAGAAGTTCAATTTACTTTGCTATTCTGCAGACACTTGAAGTACTTCTTGACATGCTTATTAAAGATGGATTTACTTATGATGCCTTCATTGCGATGCAAGCTATGAGGTAATCTATTCTATGGATGTTTACCATTTCCTGATATAAGTTTTAGTGCCTGAACAATATGATGTAGTGATCTAATTGCATTGTTAGTTGTTCCAGAGGTGTACAGTATAGAAGTATGTCCCACTATGCCCTCATTATTATTGTTAAAGTATGAAAGAACATTCATCTTTAAAAAATATCTGGTGTTTCTCTGCTCTCTAAATTTTCAGTCTTGAGTATTATATTTGCTGAAAACCTTCTTGAGTACACATATATTATAACTGTTCATATCAAAGGATCATTGCTTTTTTTAATGGATTCCTTTTGGGAATGGTATATTTTCTATTTTTTGGGCATGTCTGTCCTTGTTTTGCTACCCCTTCATGTGTCCTGTTTTATTGTACTACCAACTAGTTTCTGATTCTAGCTGCTATTTTGTTATTCTTTTAACTGAAAAAGGTGTTATCTTCAATGTGGAGATATTGATTCCGCCGTTAAGATTTTTGAAGAGTACACAAGCTCAAAATCCCCGCCTGCAGAGTTGTATGTGGTGAGTAAAACCCTTAGTAAGAAGGGAAACTTTTGTTGAGGAAGTGATTTTTTTTTGGCAGGGAAAAAAGTTAAGTACAAAAAAAATGAAACAAGTTTGAGATCATTAATCATTAACCATAAGTGCTAACTGTATTCTGAAAGTACAAAAATTATGTTTAGTACCTAATCCCTCTACAGAGTAAAAAAAAGACCGAGTCGATAAGATAGTGTAGTTTGCACGATTCTACTATTCTTATGTCATAAAAAAAAACAAGTTTGAGATCAATCACTGTTAAGTTCACACGATTAGCTTACCTCTTGTGTTCACTACATCAGTTCCTAGTGGCTTCATGAAATTTAAAAATCAGTTTGATCATTGTCTTGTCAAAAGTGATACTGTTACTTTTTTGGTTGACAAGCAACATAGGTTTGGAACTTTGGATTCCTCTACATAATTTACAATTCTAGTGAATAACAGGTTTACTATACAGTATACACTGCTGAACCTACTCTGGTTTTGTGCCGTTTCTAAGCTTTTGAACTGAAACACAAATTAAGGCACTATACCATTTCTTACATTTTAGTTACTATATAGGATTTATACTATCTGCTTTCTTGCTTATTAGTCACAGTAGCATTGTCTTTTACAGCACTGCTAAATAAATAAATAACTTTTACCATGGTGGAGCTCATTGAGGATCTACATGGAAATCATAAAAAAGTAGTCCATTTCAGTTGACACTCTATCTCTTGTTTCGAACTTTGTGCTCTCATATATATTTGTGTGTATTCTATGCATAATTGGCATGCAGACACTTGCTGAGGGAGCTATGATTGGGCATACACCAAGAGGAATGCAACTTGCTCAAGAAACCATAGTAATTTTTCCTTCTGTTTTGGTTTTCTAGTTTCTCCAACTTAGAAATTCAATTTTTTACATCTCAGAATATTTTTCAGGAGAAGATGACTTCGAGAAATTTCTTCTTAAACGCAAGGATGGGAACTGATCTTCTACTTGCAGCTTCAGGTGAAAAGGTAAGTATCACAGCTACCACCCTCCTGTACTTGCAAGTCCTACAAATGCTAATGCATCTATTTGAAGAAAACACAATTATTTTACTTATGTCATATTCTTGAAATGAATCCAAATAGCTTCCCAAATCACTTACGGTTGAAACTCTGTGGATTCTTTCAGACTGGTGGATATACAATAGCAAATTATGTCTGGGATCTCATGCAAAACCGCAGAATCACTCCATCACTTCCTGCTGTTGAAGCATACTACAAGGGTTTGAAGGTAAGCTCAGATTTTGCAATATTGTGGCTAGTATGTTTAATTCACCCTAGAATCACCCATGATATTGTTTCCTTATATTGCATTGAGTAAATTCATTAGCTGCGTACCGTCCTGATTTTTTTTTTGAAATCATTGGATATTTACATATCATAGTATGCTGACCTAAAGTCACTGTTATAAACTACTAGTATATGGAGTTTTATTCATGTTTCTCTCTTTTTATTCTAATTACATTTCATCTCCCTTCTTTTCAAATCAGGAACGTGAAATTCCTTCTGATGATCCACGGCTCATGAATGTTAGCCGTGTCTTGGACAATCTGAGCATTCGTTTTGGACCAAGGAGAAACAGTAACGCACAGGCATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018817

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018817&oldid=47573"