BGIOSGA018823

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Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018823| Description = cDNA, clone: J075187B20, full insert sequence| Definition = Oryza sativa Indica Group BGIOSGA018823, complete gene.| ...")
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Gene Name

BGIOSGA018823

Description

cDNA, clone: J075187B20, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA018823, complete gene.

LocusTag

OJ1607_F09.8

Ensembl Transcript ID

BGIOSGA018823-TA

Ensembl Protein ID

BGIOSGA018823-PA

Length

4170

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2786791..2790960

Sequence Coding Region

2790732..2790960,2790106..2790284),complement(2789951..2790022,2789669..2789749),complement(2789458..2789568
,2789055..2789140),complement(2788466..2788585,2788254..2788376),complement(2787263..2787329
,2787109..2787185),complement(2786791..2786848

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2786791..2790960 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2786791..2790960 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAAGGCCTCGAAGGGGTCGCGGAGAGGGAAGAAGGCGTGGCGCGCCAACATCAGCACCGACGACATCGAGGACTTCTTCGAGAAGCAGACGCGCGACGCGCACGCCGGGGCCGCCGCCATCCCGTCCCTGCCCTCCGACTCCCTCTTCTTCGTCGACAAGCCGGCCTCCGCCGCGTCCACCTCCTCCGCCGCCGACGCCGCCGCGGCGGATGCCGCCCCCAAAGATATTCCTGTCAAAAGGAAGATTGAGAAGAAGAGAGAGAAGGTTCTATATCATGAGAGTGTATTGAAGCGGAATCCATATGTACAACCAGTCCCGTCTTCTTTAACGACAAAGAAGGATAAGAAGAAGTCAAAGAAGAAGGAATCGAAAGAGACACAGGAAGCGAAAATTGTTCCCATGGAAGATGATTCAGGTGATAAGATCCTTGACATCTGGGGTGAAGATGTTAAAGGAGACCACAAGGCTAAAAAGAGGTCTACCGCATCTGTGATTCCTGCTGTTGAAGTTGAGGCCCCAGGATGTTCATTTAATCCCCCATTCGAAGCACATCAGGATTCTCTTGCTCAAGCTGTTGCTGATGAGATGCGTAAAATCTACACGAAAGAGTTAGGGCCCAAACCTGTGCCACTTATTGTTCCTGGTGAAGCAATCACTGAAGAAGATAAATTTTTTCTTGATGCGGATGATGGAGATGAAGCTGTTGAAGAAGGTGATGAAGACCAGGCTGCTGATGCTTTGGCTGTTCAGAGGAAAACTAAAACGAAAAGAGTTACAAGAGTAGAACTGAACAAAAGAGCTCGTCGTAAGGAGAGGTTAAGAGCAGAAGCTGAAGCAAAGAAGATGGAAAATCTTTCAAAGGAAATAGATAGCCTGCCTGATATAATAAATGAAATTGCTAAAGAAGATGAGGAAAAGGAGAAAAGGCACATAAGGCGAACTGTGGCTAAACAGGAAAGACTGAAGTCAGCCCCGCCTCGTCTGGGCAGACACAAATTTGAACCAGCTCCTGTTCAAGTTCTATTAACAGAAGAGATTAGTGGCTCTCTTAGAAAGCTGAAGGGGTGCTGTAATCTAGCAAGGGACCGATATAAGAGCATCGAGAAACGTGGAATACTTGCACCAAGCAGAAAAATAAGTACAAATGATTCCAGTACAAATGAGGAACATGGCGATCCCAGACGTGGAGCGTCTTGA</cdnaseq>

Protein Sequence

<aaseq>MGKASKGSRRGKKAWRANISTDDIEDFFEKQTRDAHAGAAAIPSLPSDSLFFVDKPASAASTSSAADAAAADAAPKDIPVKRKIEKKREKVLYHESVLKRNPYVQPVPSSLTTKKDKKKSKKKESKETQEAKIVPMEDDSGDKILDIWGEDVKGDHKAKKRSTASVIPAVEVEAPGCSFNPPFEAHQDSLAQAVADEMRKIYTKELGPKPVPLIVPGEAITEEDKFFLDADDGDEAVEEGDEDQAADALAVQRKTKTKRVTRVELNKRARRKERLRAEAEAKKMENLSKEIDSLPDIINEIAKEDEEKEKRHIRRTVAKQERLKSAPPRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKRGILAPSRKISTNDSSTNEEHGDPRRGAS</aaseq>

Gene Sequence

<dnaseqindica>1..229#677..855#939..1010#1212..1292#1393..1503#1821..1906#2376..2495#2585..2707#3632..3698#3776..3852#4113..4170#ATGGGGAAGGCCTCGAAGGGGTCGCGGAGAGGGAAGAAGGCGTGGCGCGCCAACATCAGCACCGACGACATCGAGGACTTCTTCGAGAAGCAGACGCGCGACGCGCACGCCGGGGCCGCCGCCATCCCGTCCCTGCCCTCCGACTCCCTCTTCTTCGTCGACAAGCCGGCCTCCGCCGCGTCCACCTCCTCCGCCGCCGACGCCGCCGCGGCGGATGCCGCCCCCAAAGGTAAAATCACAAGGCACGTGGGGTCGAGCGTGTGGATGTTGCTGGGTGATAGACTCCCGAGTCTTCTACTTCGTGGTTCGGGTTGTGGTAGTAGTTTCGAATCGACGCTAAAGTTTGTGTTCTTGGAATGCTTAATGTGAAAAATTGCTTCATATAGTCGCGTCAAGCTGGTTCTATCACCATTTATCTATATATATTGCTTTGATACTGTGAAGATTAGTTAACCTTCAGTTTGGGACCTGAGGATATGCTCTGTTACTTTTAACCGCTCCTTTTGATATTTAATTATAAAGTGGTTCATATCAGCAATGAATTATCTCACTTGCTTCAAAGTAGGCGCAAAGTTTCTAAATGAGTTAATGTTTATTGTGTCTATTCCCTCGTAACCTCTGTGTTTCCTGCTAATGTATCCCTTGGTGTGTTGGCACTTTTGTTTACTGGCTATAGATATTCCTGTCAAAAGGAAGATTGAGAAGAAGAGAGAGAAGGTTCTATATCATGAGAGTGTATTGAAGCGGAATCCATATGTACAACCAGTCCCGTCTTCTTTAACGACAAAGAAGGATAAGAAGAAGTCAAAGAAGAAGGAATCGAAAGAGACACAGGAAGCGAAAATTGTTCCCATGGTATCAATTGCTTTTATTTGAGACAAAATGAATTTCCTTTTGTTCAAGTCCCAGGTTGCTAAGTGGACTCATCTGTTTTACAGGAAGATGATTCAGGTGATAAGATCCTTGACATCTGGGGTGAAGATGTTAAAGGAGACCACAAGGCTAAAAAGGTGTTGCTATGCTCCGCATTCTGTTAATCTGTTTTCACTTTCTCTATTTGTATTACAAAAAGTCGATTTTTAGAACTATGCAGTCATATTTTTCAAAATTTACAAATCTCTTCTGTTGCAATATGCTGAATTTGTGGGTTTTGTATATCAATTTTAATTTGTTAGTTTCTTTTTTTTTTCTTTTTATCATTTTTGTTGCAGAGGTCTACCGCATCTGTGATTCCTGCTGTTGAAGTTGAGGCCCCAGGATGTTCATTTAATCCCCCATTCGAAGCACATCAGGTATGTTTTGTAATTTATGTTCCGGATTTGGCAATGTTACCCATGTTTTAGGGATATCTTAGCACTTATATTTAACAACAAAATCCTGTTGACATTGTAGGATTCTCTTGCTCAAGCTGTTGCTGATGAGATGCGTAAAATCTACACGAAAGAGTTAGGGCCCAAACCTGTGCCACTTATTGTTCCTGGTGAAGCAATCACTGAAGAAGATGTAAGTCTTATGCATCTCTTTGCCAATAGATGGTTGAAATTTCTATATTCTCATGTCTTGGAAATGTTACACGCGCTCTCAACTTTTTAGTTACTTTGCAATGAAAACTGCCTTTTTGTGAACTTCGTTGTGTATTATGAGTTGAGTATTTTTGGAGTTGGATTCCATATACAATGTCAGTATGTTCTGTGGTATATTCATTTAGAATAGCATGGCCCTTCAGGCCTTCACCTTACTAGTGGATTGTGCTTGTGATGTCTATGTAGCATTTTTGCGTACAATCTTACTTATACCTTTTTTCTGCATGTTGCCTACAGAAATTTTTTCTTGATGCGGATGATGGAGATGAAGCTGTTGAAGAAGGTGATGAAGACCAGGCTGCTGATGCTTTGGCTGTTCAGAGGTTAGATTCGACAGTTCTATTGGAAGTATAGTTTTAATAGGTTATGCACTTATGCTGTACGATAGACTTATGCGTGATGCTTAAATTTCCAAAGCTTTTACATGCTTTTAGGGATAACATGGTCACTATGCCCTTAATATATATTTTCAAAGCTTTTATGTTTTAATATATCTTTTTCCATTTCTATATGATAATAAGCTAATGGGGCAAAATATGGGTTATCCCTGTTTAGAGTTTTTATATTCCTCAATTGCTATGTGGCACTTGCTAAGTAATTATATTAGAATTCAGGTTTACTGTATTTGTGAAAATAACCATGAAAGTCACAGCTTATAACTTAAGAATTCTGGAATTACCATGTGCTGTTCTTGATGAACAAAACACACTGTTCTGACTCAGTAAATTTTAAATTTGTCTTGCAAACACTATTAGAGTGTACTTTTGATTGTATGATTTATTATTTTTTCAGGAAAACTAAAACGAAAAGAGTTACAAGAGTAGAACTGAACAAAAGAGCTCGTCGTAAGGAGAGGTTAAGAGCAGAAGCTGAAGCAAAGAAGATGGAAAATCTTTCAAAGGAAATAGATAGGTAGTTCTTTTTATTTTTGTTCACTAATCTCCCAAGATCTGCCATTTCAGTCAAAGTTAGCTTATATTATTATATTATTCTTTTTGCAGCCTGCCTGATATAATAAATGAAATTGCTAAAGAAGATGAGGAAAAGGAGAAAAGGCACATAAGGCGAACTGTGGCTAAACAGGAAAGACTGAAGTCAGCCCCGCCTCGTCTGGGCAGACACAAGTACACCTCTAAAATCACCTACTCTAAGTCACTCATATTTTCTTACAGCAATTCCTTTAATCTTGGATAAAATTGCTACACTGTTTTAAAGATTCTGCAAATTAACAAAATAGTTTAGTTTGCATATTTCACATATAATGATGCCATAGTATATCATGGAGACATTTAAGTTAGTAGGCAAGATGTTTCATGGACACTCAAGTAGAACAATAATTTTAGAATACCGTGATGTAGTAGTCGTATTCTTTTTGGAAGTGAGGCAGTTGAGTACTCCCTCCGTTTCATATTAGAAGACTTTCTAGCATTTGCCTACATTCATATAGATGCTAATGAATCTAGACGGGGCAATGCTAGAAAGTCTTATAATATGAAACGGAGGAAGTAGTTGACACAAACGCTATGAACTGTGAGTAAAGTTCTCTTCCGGAGAAGTATTTTGGTGTTATACTGTTATGCACCCACTTACAAGCACATCACATGTTAGAAAACAGTTCAGCAAAGCAATAATCAAATCATCGCATGCGCCTACTTTTTCATGGAACTTGTCAGCCACAAACTCTTTATCTTAATTAAGATAGAAATATTCATCTGCTCATCCAAGTCCTTTTTCTCTCGCCCTATTACTTTATGCTGTTCAAATTAGCATTGACAGTGACTTATTTCTGAGGGTATATTTTAGTATAGCAGGATTTGTTGCTACTTCCTCCGTTTTACAATGTAAGTCATTCTAGCATTTCCCACATTCATATTGATGTTAATGAATCTAGATAGATTTATATGTCTAGATTCATTAACATCAATATGAATGTGGGAAATGCTAGAATGACTTATATTGTGAAACGGAGGGAGTACATGTGATGCTATATGCCTTGTTATTTGGTGATGGGTTTGGTTTTCTAATTAACAATTACAAATTTCAAACAGATTTGAACCAGCTCCTGTTCAAGTTCTATTAACAGAAGAGATTAGTGGCTCTCTTAGAAAGCTGAAGGTGAGAGGGACTCCTTTAGTTTCCATTCTGGTCCAGAATTCAGCACGAACTAATTGCTTTTATATGATTTCATGCAGGGGTGCTGTAATCTAGCAAGGGACCGATATAAGAGCATCGAGAAACGTGGAATACTTGCACCAAGCAGAAAAATAAGGTTTGTGTTCTTGTTTCATCTTAAAGATAAGTCAAGGAATTTTGCATAGTTTTGTTCAAGTCATGGCTGAGAGTCTGAGAGCTTTGCTGATTGATATCTTTTGGTTGGCACAACATTTTTTTTTTTGCTGACTGTTAAGTGTTCTATGGATGGTTTGCTATAATTCTCCAAGAATGCTTCACAGTATAACCCATGTTTACATCAAATCTGCCCCCATGAGCAGGAAGCAACGCTAGAAATGCCACCTGTGCATGTTCCAGTACAAATGATTCCAGTACAAATGAGGAACATGGCGATCCCAGACGTGGAGCGTCTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018823

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018823&oldid=47579"