BGIOSGA018827

From RiceWiki
Revision as of 02:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018827| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018827, complete gene.| tag = OsI_184...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018827

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018827, complete gene.

LocusTag

OsI_18421

Ensembl Transcript ID

BGIOSGA018827-TA

Ensembl Protein ID

BGIOSGA018827-PA

Length

2988

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2745750..2748737

Sequence Coding Region

2748666..2748737,2748381..2748591),complement(2747512..2747842,2746622..2746696),complement(2745750..2746251

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2745750..2748737 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2745750..2748737 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCAAGCAGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGGCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCACAGCAGTTGATGCTTCAAAAAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAA</cdnaseq>

Protein Sequence

<aaseq>MVGDLSSLLAAASSASPVVLAPSKELHGVHLPMPLQGKRPPLQPQDAAVHIEAAAAAAAAFQGQVMVPGHAHAGAPAAFQAFAVPDMAALIDVQADSHPDSVQLSLGIAEQCSRQEKILKFLRSGSDVKELDVSLLTELTGHQTLPINLGTQPYIPDDKLSALPISMGSQPYIPDDKLSIYEFELDEPQQYLPENQLVIPDPLVEKRRSRASSHASNSKLASTAVDASKSTANGKSKSSSRKKQKSKNIKERDLYPKNYFHASEAFLSMLLDKDNSSSTIHSLKKAGPEISELLTKCSIGIAGTGLAVLLSVVCKMATGMKSPIAATRLVNTGVGLGLFWLSWAVNGLRDTITSIFRSPGDMNLKDEEVAVRIQKSMNDILFRAITILAITAFKFA</aaseq>

Gene Sequence

<dnaseqindica>1..72#147..357#896..1226#2042..2116#2487..2988#ATGGTGGGCGACCTCTCCTCCCTCCTCGCCGCCGCCTCCTCCGCCTCCCCCGTCGTCCTCGCGCCATCAAAGGTGCGCCGCTTTTCTTGCTCTCTGCTACCCCGGTTGGGGCTGATTGATGATTGGGGGAATTCTTGGTTTTGTAGGAGCTCCATGGCGTGCACTTGCCGATGCCGCTCCAGGGGAAGAGGCCGCCGCTGCAGCCGCAGGACGCTGCCGTCCACATCGAGGCCGCCGCCGCCGCCGCCGCCGCCTTCCAGGGGCAGGTGATGGTGCCCGGCCACGCGCATGCCGGCGCTCCCGCCGCCTTCCAGGCCTTCGCTGTGCCCGACATGGCCGCGCTCATCGACGTCCAAGGTTCGTGTTGCCTCTTCGATTCCTCTTCTTCCTTCGTTAAGTGCATGCACAAGCACACCGTTGGCTAATTTGCTAGAGATTTTGTTGTTCAATTGAATTTGGAATTTGCCAGTCGCAGCTATGGATCCGAATTGTGAGATTAGGCATGCTTTTTTTCCCCTAAAGTTAGAGACAGTAATTTGCTTTGCAGAAAGGAGTAGAAACAAAATTCTTTGCTTGTTCATGCGCGCGCCTTGGCTTGTGGTTTACAAATGAGACCTGAAGCCATTGCTTTACACATCGGTTGCTTTCTTCTGTGTGCTTGCACATAGTACAAGATTGTGTAGTGAGCTTTGCAATGGTCTTTTCTAGTAGGATGGTTTTTCATGGTATGTTACACATAATTCAGGTCAAGATTAAAATTTCCTACTCTCACTAAGTGGTTTGTCCCGTTCGATTCATGATTTAATCTGTCAAATTTTCAGTTTTACAAGTGTGGATTAGAATTCATTTCAGTTTTGCATTTTATGCTGATTCTAACCTCGATGTATCTGTGCAGCAGACTCTCACCCTGACTCAGTTCAACTTAGCCTTGGGATTGCCGAGCAATGCTCAAGGCAGGAGAAAATCCTGAAATTTCTAAGGTCAGGGTCCGATGTGAAAGAACTTGATGTATCTTTACTGACTGAACTTACGGGGCATCAAACTCTGCCAATCAACTTGGGTACTCAACCATACATCCCTGATGATAAGTTATCAGCTCTTCCAATCAGCATGGGCAGTCAACCATATATCCCTGACGATAAGTTATCTATCTATGAGTTTGAATTGGATGAGCCCCAGCAGTATCTACCAGAAAATCAACTTGTCATCCCTGATCCTCTTGTGGAGTATAACCAGTCCCATGGTTCTGGCCTTACCATAGATCAAAAAGGGAGAATCCTCTTCAATGGAAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCATATTTTGAAAGGTAATACTGTGAAGCATCATGCTCCTGGTAGACCTTCTCATTCATCTTATTCATTTGTTCATTGAGGTTTAATACTTGAGTGATATGCAAACTCCGCGGTAACCGTGTTCTCTTGAGCACTGTAAGGTAGACCAATGATTCTAATTTTGCCACTCAGGCTGTTTTCCATTAGATAAAAGCTGTGTTAGGCACCTATGGTCATATTTTAGCTGTATTAGCAAAGATGTCGCATTAAGATCTTCCTTGGTCTGCTGGACATGTTGACACCGTTTCAACTGGCCATGAATAGTGCATAGCATATTTGTTCGCGGTTGGAATGAATAATTCCATGTCTGGATCAATACTCCCAACAGAATTCTAAAGACTGCTGCATCACTTCACGCACAAGACGCTTTCCCTGTATAAATACAGAAGTAAGATGTTAAAATTATTTCTTAACACTATTGCTGTTCTAGACGACATGTTTCCTTGTGCTTCACAATGATCTGTTAAAAGGGGCATTGCATTGCCTCTGTAATCAATGTTGAATCATGTGTTTTTTTTCTTGTCTTAGTGACCCCATCCTCATTATTGATGCCTCTTTTTTTTGGCTTTTGTCTAATTGTCTTATAAATGTCTTTTTTGATAAACAGGAAAAGGCGATCCCGAGCAAGCAGCCATGCATCCAATTCAAAATTAGCAAGCACAGCAGTTGATGCTTCAAAAAGGTACATTGCAGTCACTTGTGTATTTTCTGAACACCAACCATTAGCATAACTTCTATACTGTTTTCCTGCCATAGTCATGATAAAGGTTAAATACTCAATGGATTGGGTTGAAGTAGTGCAATTCTTATTCTTCAAACTGCTAGTGTAGACTTTGTAGTTACTTCGAAAAGATACACAATCACTTGCAGCATAGACTAGACACAAGTAGTGGCAGGCTTTTTTGTTTGAACAAAATAAAAGATCAGACACATAGAACAGACATGTGGGAATTACTGGACTAAACTACGATGATATTGCTCTTTTTACCTGTTTCTAAAACTGCATCCAAGGTTATTTTTACATATTAATGTGATTTTTTTTAAATACTCAGCACTGCAAATGGGAAGTCAAAATCTTCATCAAGGAAGAAGCAGAAGAGTAAAAATATTAAAGAACGTGACCTGTACCCGAAGAACTATTTCCATGCTAGTGAAGCATTTTTATCTATGCTCCTGGACAAGGACAATAGCAGCTCAACAATTCATTCACTGAAAAAAGCTGGTCCTGAGATCAGTGAACTGCTGACAAAATGCTCTATTGGCATCGCTGGAACTGGCTTGGCTGTTCTTCTCTCAGTTGTGTGCAAGATGGCTACCGGTATGAAGAGTCCTATTGCTGCTACGCGGCTGGTGAACACTGGTGTTGGACTTGGGCTCTTTTGGCTCTCCTGGGCAGTAAACGGATTGCGAGACACAATTACTAGCATATTTAGAAGCCCAGGTGACATGAACTTGAAGGACGAAGAGGTTGCAGTCAGAATACAAAAGAGCATGAACGACATTCTCTTCAGAGCTATCACTATATTGGCAATCACTGCTTTTAAGTTTGCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018827