BGIOSGA018854

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018854| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018854, complete gene.| tag = WRKY5| ...")
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Gene Name

BGIOSGA018854

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018854, complete gene.

LocusTag

WRKY5

Ensembl Transcript ID

BGIOSGA018854-TA

Ensembl Protein ID

BGIOSGA018854-PA

Length

5335

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2443783..2449117

Sequence Coding Region

2448932..2449117,2448663..2448746),complement(2448360..2448521,2446512..2446820),complement(2446076..2446189
,2443783..2444436

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2443783..2449117 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2443783..2449117 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGATGGTGCAGAAGCAACGACACGAGGAGGGGGAAGAGGAGCGAGGAGGCTTGTGCGCCCGCGAGATCAAGGAGCTCGACTTCTTCTCCGCCGCCGGTGCCGGTGCCGGCCGGAGAGACGACGACGACGTCCTCCGTGCGGATGGGATCAGCAGCAGCCACGCCGGATTTATGGTCAGCACTGCGCTGGACTTGCTGACAGCGGTCAACGACGGTGATCATCATGAGGAGAAGAAAGGGCAGTCAAATATTCACCAAAGCAAGCAGATGGATGCGGCGGCGACGACGGTGGAGGGGGAGCTCCGGCAAGCCGGCGAAGAGAACCGGCTGCTGCGGCGGAGGCTGGAGGAGCTCACCAGCAGCTATGGCGCCCTCTACCACCAGCTCGTCCAGGCGCAGCAGCTGCACACCAAGCATCAGCAGCAGGCTCCGATCGCCGGCGTGCAGTTGCTGGACGCGCTCGCGGCGGCGTCTCCGGCGAGCCACCGGCGACGAGCGGCGGCGGCGGTGGACGGCGATAGAACAGCTGACTCTGATGGTGGCGAGGGCGACGAGAACGTGTCGCCTTCTCTTGGTAGCAAGAGGCCGGCGGCGGCAGCGACGTTAACGCGGCTGACGCCGGAGAGCGGCAGCGGCGGGGAGAATAATGGCGGCGGCGAGCAGGCGCCGGCGGCGGAGATGGCGCCGTGCCGGAAGGCCAGGGTGTCGGTGCGAGCACGATCCGAGGCTCCAATGATCAGTGATGGATGCCAATGGAGGAAGTACGGGCAGAAGATGGCCAAGGGTAACCCTTGCCCTAGAGCCTACTACCGATGCACAATGGCTTCGCAATGCCCCGTCAGAAAACAGGTGCAACGATGCGCGGAGGACAAGAGCATCCTCATCACCACCTACGAGGGCACCCACAGCCACCCGCTGCCGCCGGCCGCCGCCGCCATGGCCAAGACCACCTCCGCCGCCGCCGCCATGCTCCTCTCCGGCCCCGCCGTCAGCCGCGACGCGCTGTTCGCCGCCCACCACCACGTCGTCGCGCCGCCGCCCTTCTTCCACCACCCCTACGCCGGGTCCACCATGGCCACGCTCTCCGCCTCCGCCCCGTTCCCGACCATCACGCTCGACCTCACCCAGCCGCCGACGACGACGACGACCACCGCCGCCGCCGCCATGCTCCAGCTCCACCGCCCTCATGCCTTCTCCTCATTGCCGTTCTCGATGTACGGCGCCGGCGGCGGCTCGCACCGGCCGCCCGTCGTCCTGCCCCCGCCGTCGTCGGTGGTGGAGACGATGACCGCCGCGATCACCAGGGACCCCAACTTCACCACGGCGGTGGCGGCCGCGCTCTCCTCGATCATGGCGGGAGGCGGCGCCCAAGCTCGAACACCTCCACGCGGCGGGAGTGACGCCGCCGGAGACATCAACGGAGGCGGCGGCGCCGACCACGCCACTGCCGGAGCACGCGCCGCGGCGGCGGCGACGCAGCCTTGCGGCACGTCTCCCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MEMMVQKQRHEEGEEERGGLCAREIKELDFFSAAGAGAGRRDDDDVLRADGISSSHAGFMVSTALDLLTAVNDGDHHEEKKGQSNIHQSKQMDAAATTVEGELRQAGEENRLLRRRLEELTSSYGALYHQLVQAQQLHTKHQQQAPIAGVQLLDALAAASPASHRRRAAAAVDGDRTADSDGGEGDENVSPSLGSKRPAAAATLTRLTPESGSGGENNGGGEQAPAAEMAPCRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMASQCPVRKQVQRCAEDKSILITTYEGTHSHPLPPAAAAMAKTTSAAAAMLLSGPAVSRDALFAAHHHVVAPPPFFHHPYAGSTMATLSASAPFPTITLDLTQPPTTTTTTAAAAMLQLHRPHAFSSLPFSMYGAGGGSHRPPVVLPPPSSVVETMTAAITRDPNFTTAVAAALSSIMAGGGAQARTPPRGGSDAAGDINGGGGADHATAGARAAAAATQPCGTSPT</aaseq>

Gene Sequence

<dnaseqindica>1..186#372..455#597..758#2298..2606#2929..3042#4682..5335#ATGGAGATGATGGTGCAGAAGCAACGACACGAGGAGGGGGAAGAGGAGCGAGGAGGCTTGTGCGCCCGCGAGATCAAGGAGCTCGACTTCTTCTCCGCCGCCGGTGCCGGTGCCGGCCGGAGAGACGACGACGACGTCCTCCGTGCGGATGGGATCAGCAGCAGCCACGCCGGATTTATGGTCAGCGTAAGTCGTCGTCGTCGTCGTCAAGATCTAGCTAATAGCTTGCTTGACGATACATCCATGCTTGCACATATATGTTTCATGAATTATGGGATTTAGGTTGCAAGATGCATGTGATCTCGATCGATGGCTTGATCGATGGATCTTGATTAGTATTTCTGATTGTGTTTGATCGATCGATCGAGCAGACTGCGCTGGACTTGCTGACAGCGGTCAACGACGGTGATCATCATGAGGAGAAGAAAGGGCAGTCAAATATTCACCAAAGCAAGGTAATTAAGCATCTTACTTACTTTACTCATCTTGATCTATTATGGGGGATCAATTCACACACATATATATATATACTTTTCATGACCTTAAGGGAGTACGTACGTCGGAATTAATTCATAACATTATATATATATATGCAGCAGATGGATGCGGCGGCGACGACGGTGGAGGGGGAGCTCCGGCAAGCCGGCGAAGAGAACCGGCTGCTGCGGCGGAGGCTGGAGGAGCTCACCAGCAGCTATGGCGCCCTCTACCACCAGCTCGTCCAGGCGCAGCAGCTGCACACCAAGCATCAGCAGCAGGTATGTAATTAATACTAATTTTTGCAATTCGTGACAATAATCTCAATTAACCCGATCAAATCAAATATGTTTTCCGGCCTGCTGCTGCTAATTGATCGATCAACCAAAAAATTGATACACGTACGACTTATTTGATTCTCTCACACTAACTTATAGTGATCTCTAGTCAACGCTGTACTTTCATGTGCAGCAAATTATATACTACATGGTACTATTTGTTTTTCTTTCAATAGAAGAAACCGATGATATGTTACGCAGCAACTAGTAATTAAATTATGTCTCACATGAAACTGCTCCTATAAATCCGCATAGCTGATTGCAACCTGGCTTCCCATTTTGTGTTTCAAATTAACGATCGACGGCTTATTCTGCTCCTGATTTCTTGTTCTATATATACATATGCACAATTAACTCATCGATGAGGATTAAGGGAAAAAATTGATTTTTTTCGACGAACAGTACACGGTCATGCAGATGCTAGACGCCACTAATTAACACAAATCGTGCAAGCACGCATTGCCGCGGTTCAAATATGTCGTTAGTTCAGATCATAATCAAACTAATCAAGTAAATTAAGTCTGTTACCAACTACTATTCAATTCAGAATGTAGACCGTGATGTCAATGATGTATATATTTTTTCCTAAAACATTTGGATATAGACCTATATGGATGAACCTAACCAATATTGATTGGCACTCTCGATTATCACAGTGACGTGCGGTTTAGTTTGTGCAAGATTTCTTGCTAAATATTCATGATTAGCTAGTTTGTCAAACCTCTGCACTAATTTGTCAATTATTCAAAAATTACATTTATACATATGTTTATTTTCTAGGTGCATCATGGACATGCCCATGCATATTGTAACTAAAACATAGAATTATATATGTACACATATATAATTCGATAAATTTGCTATTTTTGATGCATATATTCCTTTATATATCTAATAACTCCAACATTACATGTATATTGCCCAATACGTTTTTGGCTCATAATTGGCACATATTTTTGCATGATAAATTCGATAGTATACTTACCTAGATCTGTAGTCAAGAGAAATACATTATTTGGCACATTTTTTTGCATGTATATATCGATCTCTTCTCATCTTCTGTGCATCCATTTTCCAATTAATTAATTAAGGTGTGTGCCTCAAGCATCACCCTTTGAATTTTGTGATCGTCGAAGGGAGACCGTGCATGCATACCGTACGTGTCAGCATAAATTCAACACCATGATTTATTTAGGCCGGTGATCAAATCCATCACTCTTTTATAACAAATTAATTGCAAGAGATCGACGTGTGTCGATCGAGATACAAATGCACAAGTGTGCAGTGTGTTTCTAGCCACAGAATCAAACAAGAGAGAATCCATGCTGCAAGAGACCAAACACAAAAGAACTTGAAACTGAAGCTAAGCTGCATTTACTTAGTAGTAGTTGGCACATGCTAATCCTTGATTTTTTCGATCACTTTAGTCTTTATCAGTAATAGCAATTGACGTACGTGCTACTGTTCGATCGATTGGTGCAGGCTCCGATCGCCGGCGTGCAGTTGCTGGACGCGCTCGCGGCGGCGTCTCCGGCGAGCCACCGGCGACGAGCGGCGGCGGCGGTGGACGGCGATAGAACAGCTGACTCTGATGGTGGCGAGGGCGACGAGAACGTGTCGCCTTCTCTTGGTAGCAAGAGGCCGGCGGCGGCAGCGACGTTAACGCGGCTGACGCCGGAGAGCGGCAGCGGCGGGGAGAATAATGGCGGCGGCGAGCAGGCGCCGGCGGCGGAGATGGCGCCGTGCCGGAAGGCCAGGGTGTCGGTGCGAGCACGATCCGAGGCTCCAATGGTAAGTAATTAATTTTATCCGTAGTGTATTATACTTCCTCCGTTTCATATTATAAGACTTTCTAGTATTGCCCATATTTATATATATCAATGAATCTAAATATATATGTACTTAGATTCATTAGCATTTATATAGATGTGAACAATGTTAGAAAGTCTTATAATTAACCTGAAACGGATGGAGTATTTGTGAACTTCATTGCAAATTAAACCGGCTATTACACATGCACCATATAGCTGATGAAAAAACTGAAAGTTATATATATGCTTTATAATCAGTAATTAAATTAACTTTAAGCATATATACATGTTTATATATGTAGATCAGTGATGGATGCCAATGGAGGAAGTACGGGCAGAAGATGGCCAAGGGTAACCCTTGCCCTAGAGCCTACTACCGATGCACAATGGCTTCGCAATGCCCCGTCAGAAAACAGGTACATCATCTACACTAGTCTTTTGTATATTTTTTAGAAGATTATTACTCCAATATTACTGATTCCGCGTTTGTAGCACAATGTCTGTTAATTAGAGCAACTATTTAATTAACTTGAGTATGTGTCTAAACTTTTCTAGAATTTTCTGTGACATTTGCTAGTTGTGTATACAAAATATTCACGGGAAACTTATGTGCACGGATATGTTCCAAACATGATATATATGTAAAAGATTATATAAGCAACAACCATCTAAGTCATTATTCGTAAAATTGTTTTGGGAGCTGAATGTCCTGATCTATTGGGTGTTGTCATAATTGTTGAGAACAGGAATAAATTGGGGATATTTTCTATATGATGGACCAGCATAAAATGTCGAGGGAAACCGATTAAATTAGTGCCGGCCTCGTGCCAAAAGTACACTTTGTTCATTTCAATATGAATCGGTAGCAATATTTACATATAGATAGGACAACATATTATTCCTGGGCACCCTGCAATCGATCAAGGAATATATAACAATTTGCTTATTGCAATTCTTAAATAGAAAACAATAGAACATGTACTATCAAATTAATTAATTAGTAGTACTACGTACTACCGCTACCTCGGAATAGATATATAGTACCATGGAAATTTATTATTTGCTATTTGTACCTCATTTTTATATATATTGAAAGTATATGAACAACTCCAAGAAAACATACTACAAATGTGTACAATTTTTTAAAGGGCACGTAGGCACTAATGTGAACATATATAGTATATATTAGTACAAGGTCATTGGCTTGCAGGATACACCCTTTGCACACGATATAAATGAATAATAATTAATTAACAACATGGCTGCAAATCTCTTCTGTATCTTACTTGACCCTACTGGTCCATATATATATATATATAAATTAACAGCATGATGGATTAGCTGCACTAATTTATTCCAAGCACAAATCATGACGTCCCACCAAAACCCTGACACATATTGTCCAAGTTGAAATATTAGTCAATCATCGAATAAAAATTCTGCAACTTGTTTGGCTTATACGAGCATCCAAGAAAAGAAAATAAACACTCTAGCAAATATATATGCTATGTTTGGAATAAGATTTTATCATTTTCTTTTAAAATCTATATAATTACTTCGGTACTTTTAAATTGTTAATCTATACTCCCTCGTAACAAAGTATAAGCATTTCTAAAACTCGAATTTTGCACCAGATTATCCTGCATTTCTGATACACTGATTCTAATTCACGAAAATCCCTACATTTTTAGCCCACTAAGAGAGTACGTAGTATGTTCTTGAGAGGCACATAAACAATTCAAAATTTTAAATTTTGTTACTGGGAGGAAATTTTTTTCCCTCGGTACGTATTTTGGCTATTTGCTAAATAATCTAAACATGCTTATATTTTAACAGAGAAGTACATATTAATTTTTAGAAAAGTAATTAAGAAGCTAGCTACGGATAGTCGTTGAAGTTTTAAAAATTTTGATCAAATTTTATCTTAAACATCAATTTAATTAGCTATGGCTAGATCGAGGGATTAACTAATTAATACAGTAATTTGCGCGAAAAGAGATGAAAATTAAGTAATTAACGGTGACTAAAAAACTGAAATAATTTGTGTACGTGCAGGTGCAACGATGCGCGGAGGACAAGAGCATCCTCATCACCACCTACGAGGGCACCCACAGCCACCCGCTGCCGCCGGCCGCCGCCGCCATGGCCAAGACCACCTCCGCCGCCGCCGCCATGCTCCTCTCCGGCCCCGCCGTCAGCCGCGACGCGCTGTTCGCCGCCCACCACCACGTCGTCGCGCCGCCGCCCTTCTTCCACCACCCCTACGCCGGGTCCACCATGGCCACGCTCTCCGCCTCCGCCCCGTTCCCGACCATCACGCTCGACCTCACCCAGCCGCCGACGACGACGACGACCACCGCCGCCGCCGCCATGCTCCAGCTCCACCGCCCTCATGCCTTCTCCTCATTGCCGTTCTCGATGTACGGCGCCGGCGGCGGCTCGCACCGGCCGCCCGTCGTCCTGCCCCCGCCGTCGTCGGTGGTGGAGACGATGACCGCCGCGATCACCAGGGACCCCAACTTCACCACGGCGGTGGCGGCCGCGCTCTCCTCGATCATGGCGGGAGGCGGCGCCCAAGCTCGAACACCTCCACGCGGCGGGAGTGACGCCGCCGGAGACATCAACGGAGGCGGCGGCGCCGACCACGCCACTGCCGGAGCACGCGCCGCGGCGGCGGCGACGCAGCCTTGCGGCACGTCTCCCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018854