BGIOSGA018860

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018860| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018860, complete gene.| tag = OS05G01...")
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Gene Name

BGIOSGA018860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018860, complete gene.

LocusTag

OS05G0134300

Ensembl Transcript ID

BGIOSGA018860-TA

Ensembl Protein ID

BGIOSGA018860-PA

Length

4047

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2189594..2193640

Sequence Coding Region

2193010..2193640,2191115..2191924),complement(2190815..2191029,2190460..2190723),complement(2189796..2189951
,2189594..2189698

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2189594..2193640 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2189594..2193640 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCCCCACCACGGCCACCGACGCCGGCGCGAGGATGAAGCCCACGACCGTCGCGTCGGCGGTGCACCGCGTCCAGATGGCGCTCTACGACGGCGCCGCGGCGTCGAGGGAGCCGCTGCTCCGCGCGGCGGCCTCGCTGCTCTCGGGGCCGGACTACGCCGACGTCGTCACGGAGCGCTCCATCGCCGACGCCTGCGGGTACCCGGCGTGCCCCAACCCGCTCCCCTCGGAGGACGCCCGCGGCAAGGCGGCGCCGCGGTTCCGCATCTCGCTCCGGGAGCACCGCGTGTACGACCTCGAGGAGGCCCGCAAGTTCTGCTCCGAGCGCTGCCTCGTCGCCTCCGCCGCCTTCGGGGCGTCGCTCCCGCCCGACCGCCCCTTCGGCGTCTCGCCCGACCGGCTCGACGCCCTCGTCGCGCTCTTCGAGGGCGGTGGTGGTGGTGGTGGTGACGGTGGGTTGGCGCTAGGGTTTGGGGCGAGCGGCGATGGGAAGGAGGTGGAAGAGGGGAGGAAGGTGGAGATCATGGAGAAGGAGGCGGCTGGGACGGGGGAGGTGACGCTGCAGGAGTGGATTGGGCCGTCGGACGCCATCGAGGGCTATGTGCCTCGCCGTGATCGCGTCGTTGGAGGGCCAAAAAAAGAGGCTAAACAGAACGATGCTTGTAGTGCTGAGCAGTCCAGTAATATTAATGTGGATTCTAGGAATGCTTCTTCTGGTGAATCCGGCATGGTTCTTACTGAGAATACAAAAGCAAAGAAAAAGGAAGCAACCAAAACCCCATTGAAGATGTTCAAGCAGGATGAAGATAATGATATGTTGTCGTCTTGCATATCGGATTCCATTGTGAAGCAGCTGGAGGATGTAGTTCTCGAAGAGAAAAAGGATAAGAAGAAAAATAAAGCAGCTAAAGGAACATCGAGGGTAGGTAAGAGTAAGCCTGCAAAAAGACCAGTTGGGCGTGATGGACATGAAGTGGACTTTACAAGTACAATTATTATGGGTGATCATGGTTCAGAAATGATGGATCATGGTGCTCTGGGTCAATATAATTTCTCAAGTTCTATATTAGCAAATGAGCAGCCTTCATCATCTCAATATGCAGCGATAGATTCAGTGCAAGCTTACACTGAAGAACTAGATGAATTATTTAGTAATGCAGTTAACATTGCAAAAGACGAGACAAGTGATGATAGTGGTAGATGTACACTAAGATCTTCATTGAAGGCTGTTGGATCCAAGAATGCAGGGCGTTCTGTGAAATGGGCAGACGAGAATGGAAGTGTGTTAGAGACAAGCAGAGCATTTGTAAGTCACTCCAGTAAATCTCAAGAAAGCATGGACAGTTCAGTAAGGCGTGAATCTGCAGAAGCTTGTGCAGCTGCGCTTATTGAAGCAGCAGAAGCTATTTCATCTGGCACATCGGAAGTAGAAGATGCAGTTTCAAAGGCAGGAATCATCATACTGCCGGACATGGTTAACCAGCAACAGTACAATAATGATTATGACAATGACAAAGATGCAGGGGAAAATGAAATATTTGAAATTGATAGGGGTGTTGTGAAGTGGCCGAAGAAGACTGTGCTTCTAGACACAGATATGTTTGATGTCGATGATTCTTGGCATGATACACCACCAGAAGGCTTTAGTCTAACTCTGTCCTCCTTCGCAACGATGTGGGCTGCATTATTTGGATGGGTATCCCGGTCCTCATTGGCCTATGTGTATGGGCTTGATGAAAGTTCTATGGAAGATTTGTTGATTGCAGGTGGAAGAGAATGTCCTCAGAAGAGAGTTTTAAATGATGGCCACTCATCTGAAATTAGAAGAGCTTTGGATACTTGTGTGTGTAATGCCCTGCCAGTTCTTGTATCAAACTTGAGGATGCAAATTCCAGTCTCAAAGTTGGAGATTACTCTGGGATACTTGTTGGACACGATGTCATTTGTTGATGCACTGCCTTCTCTGAGATCAAGGCAGTGGCAATTGATGGTTCTCGTGCTGCTTGATGCGCTCTCACTCCATCGGCTTCCTGCTCTTGCTCCAATAATGTCAGATTCGAAGCTTTTGCAGAAGCTTTTGAACTCGGCTCAGGTTAGCCGAGAGGAGTATGACTCCATGATTGATCTCCTCCTCCCTTTTGGAAGATCCACGCAGAGCCAGGCATCCCTGCCAAGTTAA</cdnaseq>

Protein Sequence

<aaseq>MGPTTATDAGARMKPTTVASAVHRVQMALYDGAAASREPLLRAAASLLSGPDYADVVTERSIADACGYPACPNPLPSEDARGKAAPRFRISLREHRVYDLEEARKFCSERCLVASAAFGASLPPDRPFGVSPDRLDALVALFEGGGGGGGDGGLALGFGASGDGKEVEEGRKVEIMEKEAAGTGEVTLQEWIGPSDAIEGYVPRRDRVVGGPKKEAKQNDACSAEQSSNINVDSRNASSGESGMVLTENTKAKKKEATKTPLKMFKQDEDNDMLSSCISDSIVKQLEDVVLEEKKDKKKNKAAKGTSRVGKSKPAKRPVGRDGHEVDFTSTIIMGDHGSEMMDHGALGQYNFSSSILANEQPSSSQYAAIDSVQAYTEELDELFSNAVNIAKDETSDDSGRCTLRSSLKAVGSKNAGRSVKWADENGSVLETSRAFVSHSSKSQESMDSSVRRESAEACAAALIEAAEAISSGTSEVEDAVSKAGIIILPDMVNQQQYNNDYDNDKDAGENEIFEIDRGVVKWPKKTVLLDTDMFDVDDSWHDTPPEGFSLTLSSFATMWAALFGWVSRSSLAYVYGLDESSMEDLLIAGGRECPQKRVLNDGHSSEIRRALDTCVCNALPVLVSNLRMQIPVSKLEITLGYLLDTMSFVDALPSLRSRQWQLMVLVLLDALSLHRLPALAPIMSDSKLLQKLLNSAQVSREEYDSMIDLLLPFGRSTQSQASLPS</aaseq>

Gene Sequence

<dnaseqindica>1..631#1717..2526#2612..2826#2918..3181#3690..3845#3943..4047#ATGGGCCCCACCACGGCCACCGACGCCGGCGCGAGGATGAAGCCCACGACCGTCGCGTCGGCGGTGCACCGCGTCCAGATGGCGCTCTACGACGGCGCCGCGGCGTCGAGGGAGCCGCTGCTCCGCGCGGCGGCCTCGCTGCTCTCGGGGCCGGACTACGCCGACGTCGTCACGGAGCGCTCCATCGCCGACGCCTGCGGGTACCCGGCGTGCCCCAACCCGCTCCCCTCGGAGGACGCCCGCGGCAAGGCGGCGCCGCGGTTCCGCATCTCGCTCCGGGAGCACCGCGTGTACGACCTCGAGGAGGCCCGCAAGTTCTGCTCCGAGCGCTGCCTCGTCGCCTCCGCCGCCTTCGGGGCGTCGCTCCCGCCCGACCGCCCCTTCGGCGTCTCGCCCGACCGGCTCGACGCCCTCGTCGCGCTCTTCGAGGGCGGTGGTGGTGGTGGTGGTGACGGTGGGTTGGCGCTAGGGTTTGGGGCGAGCGGCGATGGGAAGGAGGTGGAAGAGGGGAGGAAGGTGGAGATCATGGAGAAGGAGGCGGCTGGGACGGGGGAGGTGACGCTGCAGGAGTGGATTGGGCCGTCGGACGCCATCGAGGGCTATGTGCCTCGCCGTGATCGCGTCGTTGGAGGTGAATCGCCTTTTGCTGACCTCTTCTATTTCTATTTGCATTGAGCATTGATTGGTTTTTCTGTTCAAATTATTTACTCGTTTGGTTTGATTGTGCTGCCATAGGTTAGTAGTACGATGAGTGAGGTTTATGGCGGTGGCATTCTCTGTTATCCTTTGTGCTCAAATTAGGTAGAGAAAAAACTTTGGAAGATAGAAAATGGAGGAATTTGTAGTGTTCGTAGTAAATTACTTTGAGTATCAACAATTGTTGTTGCTAGTAGCAGTTAGGAAAATTCTCTGTAACATGTACAACTACAACATTTTGGTGAACTAGTTATAAACTCCTTGTGTAAAATCTCCCTACCTGATTAGCAAATTAGTAGCATTTGTGTATGACTAGAAACAATCAACTAGGTAATAATTGAGAGCTATCAAATATGGTAAGGGACAGCTGAAGAATAGACATAACCGTGGTGCCATATTTTTTGGTTGCAGTCATTCAAATTACAAGAGGACAACTAGGCAATTCACTCATTTTGTTTAGACCTACATATTGTTGTTGATAAGGGACGCTAGAACGAAGATAGGAGATTGAGAGAGTAATTAATTTTTGGAAGTACGTTACAGATTTTAATGGGAGGTAGTGACTTCTTTTTTGAGAGATTAGAGGGGTGAGAGATGAGCTGCTTACTTTGTCAATGAAAAGCGCTCAGGTTTTGTTCAATATTTCCCCGAAGAAATACAAAAATCATGTCTTTGTAAGCATCATGTGTTGTTCCTCTTTTCTCACTGCTCACGGAGGTGCCTAAACTGCCTAACAAGGTGGCAAACTGGTCCCTAGTGCCTAAACACCAAGCCACCAAGGCAGTGGTGGTTAGGTGGGAGTGTGGTGGTACTTAGCTCCTACCTCCTAGGCACTGTTTGTTTTTCTTATATTCAAATAATGTTCTAGAACTAGATGTGACAATGTTACAAGAGTAACAATAGTTTTACTTGCAGGCACATTTATATATATGAAAAGGATATGCTCATTCTTGCTCTTTGTTCGACCTGTCTTAGTTTCGAACAATTGAAGAAACAATGAGCTTGTGTTCTGTATTTCAGGGCCAAAAAAAGAGGCTAAACAGAACGATGCTTGTAGTGCTGAGCAGTCCAGTAATATTAATGTGGATTCTAGGAATGCTTCTTCTGGTGAATCCGGCATGGTTCTTACTGAGAATACAAAAGCAAAGAAAAAGGAAGCAACCAAAACCCCATTGAAGATGTTCAAGCAGGATGAAGATAATGATATGTTGTCGTCTTGCATATCGGATTCCATTGTGAAGCAGCTGGAGGATGTAGTTCTCGAAGAGAAAAAGGATAAGAAGAAAAATAAAGCAGCTAAAGGAACATCGAGGGTAGGTAAGAGTAAGCCTGCAAAAAGACCAGTTGGGCGTGATGGACATGAAGTGGACTTTACAAGTACAATTATTATGGGTGATCATGGTTCAGAAATGATGGATCATGGTGCTCTGGGTCAATATAATTTCTCAAGTTCTATATTAGCAAATGAGCAGCCTTCATCATCTCAATATGCAGCGATAGATTCAGTGCAAGCTTACACTGAAGAACTAGATGAATTATTTAGTAATGCAGTTAACATTGCAAAAGACGAGACAAGTGATGATAGTGGTAGATGTACACTAAGATCTTCATTGAAGGCTGTTGGATCCAAGAATGCAGGGCGTTCTGTGAAATGGGCAGACGAGAATGGAAGTGTGTTAGAGACAAGCAGAGCATTTGTAAGTCACTCCAGTAAATCTCAAGAAAGCATGGACAGTTCAGTAAGGCGTGAATCTGCAGAAGCTTGTGCAGCTGCGCTTATTGAAGCAGCAGAAGCTATTTCATCTGGCACATCGGAAGTAGAAGATGCAGGTGAACACTTATTCCTTAACCCTGTGGTGCTTTGACATGCAGCTTTTGTTTTTGATATGTATTAACCTGTGCCTTTTGGTAACAGTTTCAAAGGCAGGAATCATCATACTGCCGGACATGGTTAACCAGCAACAGTACAATAATGATTATGACAATGACAAAGATGCAGGGGAAAATGAAATATTTGAAATTGATAGGGGTGTTGTGAAGTGGCCGAAGAAGACTGTGCTTCTAGACACAGATATGTTTGATGTCGATGATTCTTGGCATGATACACCACCAGAAGGCTTTAGTCTAACTGTAAGAATTCTTGAGAAAAAATAAAGTAGCACTTCTTTTTTTTTTTTCCTTCTGGTTGAATTTGGCATGTCATGCCTTTTTTCCTTTTCAGCTGTCCTCCTTCGCAACGATGTGGGCTGCATTATTTGGATGGGTATCCCGGTCCTCATTGGCCTATGTGTATGGGCTTGATGAAAGTTCTATGGAAGATTTGTTGATTGCAGGTGGAAGAGAATGTCCTCAGAAGAGAGTTTTAAATGATGGCCACTCATCTGAAATTAGAAGAGCTTTGGATACTTGTGTGTGTAATGCCCTGCCAGTTCTTGTATCAAACTTGAGGATGCAAATTCCAGTCTCAAAGTTGGAGATTACTCTGGTATGGATAAAGCTAGTTGAACAAACTAATTAAAAAGTTAAAACATTTTTTAAAAGAAAAGAATAAGGACTCCGCAATTGGTTAGTGACCTAGTTGAACCTGGATATGTATTTACTGGCTAGTACATATAGTTTTTCAGCAGCGGCTGTGAAGAGGCTTTTCGTTGCATTTTGTTCTGGTATCTAGACACCTTTGACTGAGATCAATCAAGCTACTAATATCTTGGTCAGTTTAACAATAATTTCTTAGTCATTTGGGGTTCTCTCTCATTCATAAGTGTGGGTGATGAGCTGCGCATATCTGGAAATAGATAAGAAGAAGTGGAGGCTGTACGTTACAGTTATTCTGAATTAGGGCCAGTCTCTTTTTTGTTGATTCTATTGAAGACAGCTTAACTGCTAGATGTTGCCACCAAGAATTTTATTTGTTAGTTTGATTACAGTTTCAGTAATTAACATTTAGAGCTATAATTAGTGTGCATCTAATGTGTTTTTCCCCTCCCCACTAGGGATACTTGTTGGACACGATGTCATTTGTTGATGCACTGCCTTCTCTGAGATCAAGGCAGTGGCAATTGATGGTTCTCGTGCTGCTTGATGCGCTCTCACTCCATCGGCTTCCTGCTCTTGCTCCAATAATGTCAGATTCGAAGCTTTTGCAGAAGGTGATGATGCCTTTCCCTGCCTTTCTGCTATGCAAGTAGACGGATGCACATATTCTTTTTAAGAAATCTGATCTTTCTTCCCTTTTGTGTGCTGCAGCTTTTGAACTCGGCTCAGGTTAGCCGAGAGGAGTATGACTCCATGATTGATCTCCTCCTCCCTTTTGGAAGATCCACGCAGAGCCAGGCATCCCTGCCAAGTTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018860