BGIOSGA018861

From RiceWiki
Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018861| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018861, complete gene.| tag = P0519E0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018861

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018861, complete gene.

LocusTag

P0519E07.1

Ensembl Transcript ID

BGIOSGA018861-TA

Ensembl Protein ID

BGIOSGA018861-PA

Length

2345

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2164122..2166466

Sequence Coding Region

2166347..2166466,2166175..2166267),complement(2166001..2166060,2165622..2165894),complement(2165462..2165536
,2165287..2165343),complement(2165067..2165207,2164925..2164975),complement(2164753..2164848
,2164578..2164661),complement(2164305..2164407,2164122..2164204

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2164122..2166466 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2164122..2166466 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCGGTAGGTGTGGTGCGTTCTTCCTTGGGGTTTCAGAACGAAACAAGTACAAGTGGCGATGCCGACCGACTTCCGAATGAGATGAGCAATATGAGTATAAGGGATGATAATAAGGACATTGACGACATAGTTGTCAATGGCAATGGGACAGAACCTGGTCATATTATTGTGACAAGCATTGATGGAAGAAATGGACAGGCTAAACAGACCATTAGCTACATGGCCGAGCGTGTCGTAGGTCATGGATCCTTTGGAACTGTTTTCCAGGCCAAGTGCCTGGAAACCGGTGAGACTGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGATATAAGAACCGTGAGCTGCAAACAATGCGAGTTCTTGACCACCCAAATGTGGTGTCACTAAAGCATTGTTTTTTCTCAAAGACTGAGAAGGAGGAGCTTTACCTCAATTTGGTGCTTGAGTATGTGCCAGAGACTGCTCACCGTGTAATTAAACATTACAACAAGATGAACCAACGCATGCCATTGATATATGCAAAACTATACATGTATCAGATATGCAGAGCTTTGGCGTACATTCACAACACCATTGGCGTGTGTCACAGGGATATCAAGCCACAAAATCTTCTGGTGAACCCACATACTCATCAGCTGAAATTATGTGACTTCGGCAGCGCGAAAGTCTTGGTAAAAGGAGAACCAAATATTTCTTACATCTGTTCAAGGTACTACAGAGCTCCAGAGCTCATATTTGGTGCTACTGAATACACAACAGCGATTGATGTTTGGTCTGCCGGTTGTGTGCTTGCTGAACTCCTCCTGGGGCAGCCTCTATTCCCTGGCGACAGTGGCGTTGATCAGCTTGTTGAAATCATCAAGGTTCTGGGTACCCCTACACGAGAGGAGATTAAGTGCATGAACCCAAATTACACCGAGTTTAAATTTCCGCAAATCAAAGCTCACCCATGGCACAAGATCTTCTATAAAAGAATGCCTGCTGAAGCAGTCGATCTCGTCTCCAGGCTTTTGCAGTATTCACCATACCTCCGGTCCACTGCTTCGGAAGCATTGATCCATCCCTTCTTCGATGAACTCCGTGATCCAAACACCCGCTTACCGAACGGCCGTTTCCTTCCTCCTCTCTTCAACTTCAAGCCCCATGAACTGAAGGGTATGCCAATGGAATTCCTGGTGAAGCTTATCCCCGAACATGCTCGAAAGCAATGCGCGTTTGTAGGATGGTGA</cdnaseq>

Protein Sequence

<aaseq>MASVGVVRSSLGFQNETSTSGDADRLPNEMSNMSIRDDNKDIDDIVVNGNGTEPGHIIVTSIDGRNGQAKQTISYMAERVVGHGSFGTVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRVLDHPNVVSLKHCFFSKTEKEELYLNLVLEYVPETAHRVIKHYNKMNQRMPLIYAKLYMYQICRALAYIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSAGCVLAELLLGQPLFPGDSGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFYKRMPAEAVDLVSRLLQYSPYLRSTASEALIHPFFDELRDPNTRLPNGRFLPPLFNFKPHELKGMPMEFLVKLIPEHARKQCAFVGW</aaseq>

Gene Sequence

<dnaseqindica>1..120#200..292#407..466#573..845#931..1005#1124..1180#1260..1400#1492..1542#1619..1714#1806..1889#2060..2162#2263..2345#ATGGCCTCGGTAGGTGTGGTGCGTTCTTCCTTGGGGTTTCAGAACGAAACAAGTACAAGTGGCGATGCCGACCGACTTCCGAATGAGATGAGCAATATGAGTATAAGGGATGATAATAAGGTATTATGCCTAAGAGTGGTGGATCATAGTTGCCTTTTGCTGTATTGTCAGTTGCTGATTTGATTCACAAACGTCGCAGGACATTGACGACATAGTTGTCAATGGCAATGGGACAGAACCTGGTCATATTATTGTGACAAGCATTGATGGAAGAAATGGACAGGCTAAACAGGTACTGTTCACAAAACAAGCACAAGTGATATTATGCTGATCCTTTTGTGTCCATTTAGTGTTGCCTGGGAACACAATAAGTTTTTGTTCACTGAATTATCTATCTACATTGCAGACCATTAGCTACATGGCCGAGCGTGTCGTAGGTCATGGATCCTTTGGAACTGTTTTCCAGGTTTGTCTTTAGACAGATCGATTTATGTTGCACTTGTTCAGTGTGTTAATTTGTGTGTTCTGGTGGCGATTGATGAACCCTTCATTTCTTGAATGATCTTGTATAGGCCAAGTGCCTGGAAACCGGTGAGACTGTGGCTATAAAGAAGGTTCTTCAAGACAAGAGATATAAGAACCGTGAGCTGCAAACAATGCGAGTTCTTGACCACCCAAATGTGGTGTCACTAAAGCATTGTTTTTTCTCAAAGACTGAGAAGGAGGAGCTTTACCTCAATTTGGTGCTTGAGTATGTGCCAGAGACTGCTCACCGTGTAATTAAACATTACAACAAGATGAACCAACGCATGCCATTGATATATGCAAAACTATACATGTATCAGGTAACGTTACACACCTAGATCTGCTAATCTATCCTAGCACAATTATGCATTGAGTATAACATGGAAAACCTATTATAATTGACAGATATGCAGAGCTTTGGCGTACATTCACAACACCATTGGCGTGTGTCACAGGGATATCAAGCCACAAAATCTTCTGGTATGTTACATACTTGCATTTAGTTATAATCTGTTTTCCACTTATTGAAGCTTTGTGGAGTTAGTCAAGTACTAAGTTTTGTTTAGTCAGATGGTTGCTAAAAGATTATTACTTCCAGGTGAACCCACATACTCATCAGCTGAAATTATGTGACTTCGGCAGCGCGAAAGTCTTGGTATGATCACTCATTACCAGATACTCACACGAACATTGCCATTGTCTGCTGTACCTAATCTTTTGTTCTATTATTATAGGTAAAAGGAGAACCAAATATTTCTTACATCTGTTCAAGGTACTACAGAGCTCCAGAGCTCATATTTGGTGCTACTGAATACACAACAGCGATTGATGTTTGGTCTGCCGGTTGTGTGCTTGCTGAACTCCTCCTGGGGCAGGTAAGAGATCACATTATTTACATGAGGCTTTTGGACCATCCAGCTCATTGCAACTGTCTGCCTAAGCTTTATCCTTTTTTTGTTTTAAAAGCCTCTATTCCCTGGCGACAGTGGCGTTGATCAGCTTGTTGAAATCATCAAGGTAAATTATATCTTGCTTCCATCGAAATCACTCCCTTTTTGTTGTTTACCTCCTACTTAACTGACTATTCTCTCAGGTTCTGGGTACCCCTACACGAGAGGAGATTAAGTGCATGAACCCAAATTACACCGAGTTTAAATTTCCGCAAATCAAAGCTCACCCATGGCACAAGGTAGAAGAAAATAATCTTATGTTGGACTGTTTATTTTTTATTTTAGGGTTGAAACCTAATGTAGCTTTCCTTTTTTTTTTTTTACCACCAGATCTTCTATAAAAGAATGCCTGCTGAAGCAGTCGATCTCGTCTCCAGGCTTTTGCAGTATTCACCATACCTCCGGTCCACTGCTGTGAGTGTTGTCGTTGCACTATTTGAGCCAACACCATTTTTTCGAGAAAGTTTTAGTTCTTGGCATCACTGTTGTGTTACATTTTTCTAATTACTTCATCATACAAACATGCACTGCCTTGCCAAGTACTAGTAGTTACTGATTGTGCATTTCTTTATTTGCCATTACAGTCGGAAGCATTGATCCATCCCTTCTTCGATGAACTCCGTGATCCAAACACCCGCTTACCGAACGGCCGTTTCCTTCCTCCTCTCTTCAACTTCAAGCCCCATGGTAAGCTTGCAACACCGGCTGACATATTGCATGCGTAGACGAAAATTTCTGAACCACCGATCAACTTATAAATATCTACTAATCTGGCCGATTTGAACAGAACTGAAGGGTATGCCAATGGAATTCCTGGTGAAGCTTATCCCCGAACATGCTCGAAAGCAATGCGCGTTTGTAGGATGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018861

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018861&oldid=47617"