BGIOSGA018872

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018872| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018872, complete gene.| tag = OsI_183...")
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Gene Name

BGIOSGA018872

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018872, complete gene.

LocusTag

OsI_18327

Ensembl Transcript ID

BGIOSGA018872-TA

Ensembl Protein ID

BGIOSGA018872-PA

Length

2758

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2032971..2035728

Sequence Coding Region

2035263..2035728,2035067..2035194),complement(2034888..2034977,2034607..2034792),complement(2034424..2034498
,2034235..2034336),complement(2033921..2034032,2033640..2033786),complement(2033351..2033574
,2032971..2033258

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2032971..2035728 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2032971..2035728 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCGCCTCCATGTCCATGTCCAAGCTCCTCTCGCCGCCTCCCACCTCACCACCAGCCCTCGCCCGGAGCTCCGGCCGCCGTGTCGCGCCGCCTCCCGTGCCGCACTTCCCCTTCCCTCTCCCGTACTGTAATTCCAGGCGCCGCTTGACGTCGCGCCGCGTCTTCGCCACCAGCTGCTCCTCATCCGACTCCGACCATGCTCCCTCCACCTCCAGCACCGCCCTTGCCGGCGCCGGAGACGACCTCTCCGCCGGCGTAACCCAAGAACGCGAAGGCGTACTGCCGTTTGTTCAGCTCTCCTCGGGTATAGTCCTCCGGACCGAGGAGCAGAGCTTGCTCGGGGACGACGCGCCGGCGAAGGCCTCCGCCGCTTCGTCTTTCGCGTCGCCGGATGAGCTCAACGGAGGCTGCAGAGAGGATGACCACCTGGGACAAACTCCGGCTTACCCAGCCGCCATGAACGCGCTGTACGCGGCCTGCCTCGCCGGGAACGCGACGGAGCAGCTCTGGAACTTCACATGGCCGGCCGCCGTCGCCGTGCTCCACCCGGCGAGCCTCCTCCCCGTCGCCGTCCTCGGCTTCTTCACCAAGCTCGTCGTGTTCGCCGCCGGCCCGTTGGTCGGCGAGCTCATCAGCTCGCTCCCACGCATCCCCGCCTACCGATCTCTCGCCGCAATTCAGACCGCGGCGCATTTGGTGTCGGCGGCGACGATCACCTACGCGTTCGCCGTCCACAGAGCGGCGGCGGTGGCGACGGCATCGCTGCTCCTGCGGCCGTGGTTCGCCGTGCTGGTGGTGTCCACCGCCGTCGACAGGCTCGCCTGCGTCGCGCTCGGCATCATCGCGGAGCGGGACTTCGTCGTGCAGCTAGCAGGGGCAGGCAGGCCGGTGGCGCTCGCCAATGCCAACGCGACGCTCAGCAGAGTCGATCTCCTCTGCGAGACGGTAGGAGCATCCATCTTCGCGTTGCTCCTCTCCAAGAACGACCCGCTCACCTGCATCAAGCTATCCTGCGTCATCTCGCTCTGTCAACTGCCCCTGCTGATTTTCCTGTGTGGAGAGATGAACCGGCTGGCTGACGGCATCTTCGATCACACTGAAAATACAATCTCACACGCTACTGCTCCTACTTCAAGTTTCAGCATAGGAAAAACTGTGGCAGAGGCTGTGGATACCGTCAGGAATGGCTGGAGCGAGTACATGCGGCAGCCGGTGCTCCCGGCGAGCCTCGCCTACGTGCTCGTCTGCTTCAACGTCGCCCTCGCCCCCGGCGCGCTCATGACCACCTTCCTCATCCACCAGGGCGTGAGGCCGTCGGTGATCGGCGCGTTCGGCGGCTCGTCGGCGGCGGTGGGGATCCTCGCGACGTTCGCGACGGCGAGGCTCGTGAAGGAGCTCGGGATTCTCAAGGCCGGCGCGGCCGGCCTGATCGCCCAGAGCGCGCTCCTCGGCGCCGCGGTCGTCGTCTACCTCACCGGCGCCGTCTCACGGCGAGCCGGCGCGCTCTTCGCCTTCCTCGGATTGATCGTGGCGTCGAGGGCGGGGCACATGGCGTACAGCGCGATCGGGCTGCAGGTGGTGCAGACGGGGAACCCGGCGAGCAAGGCGAAGCTGATCGGCGCCACGGAGATCGCCGTCGCCAGCCTCGCCGAGCTCGCCATGATGGCCGTGGCGGTGGTCGCCAGCGACGCCTCGCACTTCGGCGCACTGGCCGCGCTCTCTGCCACCGCCGTCGCCGCCGCCACCGGAATGTACTGCCGCTGGCTGGCCAATCCCTCCGGCTCCGACGAGCTGAGACGGATCTTCCCGTCCTGA</cdnaseq>

Protein Sequence

<aaseq>MPASMSMSKLLSPPPTSPPALARSSGRRVAPPPVPHFPFPLPYCNSRRRLTSRRVFATSCSSSDSDHAPSTSSTALAGAGDDLSAGVTQEREGVLPFVQLSSGIVLRTEEQSLLGDDAPAKASAASSFASPDELNGGCREDDHLGQTPAYPAAMNALYAACLAGNATEQLWNFTWPAAVAVLHPASLLPVAVLGFFTKLVVFAAGPLVGELISSLPRIPAYRSLAAIQTAAHLVSAATITYAFAVHRAAAVATASLLLRPWFAVLVVSTAVDRLACVALGIIAERDFVVQLAGAGRPVALANANATLSRVDLLCETVGASIFALLLSKNDPLTCIKLSCVISLCQLPLLIFLCGEMNRLADGIFDHTENTISHATAPTSSFSIGKTVAEAVDTVRNGWSEYMRQPVLPASLAYVLVCFNVALAPGALMTTFLIHQGVRPSVIGAFGGSSAAVGILATFATARLVKELGILKAGAAGLIAQSALLGAAVVVYLTGAVSRRAGALFAFLGLIVASRAGHMAYSAIGLQVVQTGNPASKAKLIGATEIAVASLAELAMMAVAVVASDASHFGALAALSATAVAAATGMYCRWLANPSGSDELRRIFPS</aaseq>

Gene Sequence

<dnaseqindica>1..466#535..662#752..841#937..1122#1231..1305#1393..1494#1697..1808#1943..2089#2155..2378#2471..2758#ATGCCCGCCTCCATGTCCATGTCCAAGCTCCTCTCGCCGCCTCCCACCTCACCACCAGCCCTCGCCCGGAGCTCCGGCCGCCGTGTCGCGCCGCCTCCCGTGCCGCACTTCCCCTTCCCTCTCCCGTACTGTAATTCCAGGCGCCGCTTGACGTCGCGCCGCGTCTTCGCCACCAGCTGCTCCTCATCCGACTCCGACCATGCTCCCTCCACCTCCAGCACCGCCCTTGCCGGCGCCGGAGACGACCTCTCCGCCGGCGTAACCCAAGAACGCGAAGGCGTACTGCCGTTTGTTCAGCTCTCCTCGGGTATAGTCCTCCGGACCGAGGAGCAGAGCTTGCTCGGGGACGACGCGCCGGCGAAGGCCTCCGCCGCTTCGTCTTTCGCGTCGCCGGATGAGCTCAACGGAGGCTGCAGAGAGGATGACCACCTGGGACAAACTCCGGCTTACCCAGCCGCCATGAACGGTAGGAATTCTGCTTCTCTGGAGCTCGATTGTTGCATATATCTCTCCTGAATCGTGTTCGACGAGCAGCGCTGTACGCGGCCTGCCTCGCCGGGAACGCGACGGAGCAGCTCTGGAACTTCACATGGCCGGCCGCCGTCGCCGTGCTCCACCCGGCGAGCCTCCTCCCCGTCGCCGTCCTCGGCTTCTTCACCAAGGTGCAGAACGCCGACCACTGACTCCACTCCAACTATATATGCGTTAGAATTAATGGCGACATTCTGACGAAATCCGATTTGCGTGCTAGCTCGTCGTGTTCGCCGCCGGCCCGTTGGTCGGCGAGCTCATCAGCTCGCTCCCACGCATCCCCGCCTACCGATCTCTCGCCGCAATTCAGGTGACCATCCATCATCCGAAAAAGCAACGTCAGATTTCTGCTTCAAGAAGAGTGTCACCGACATCATCGTGTCGTGTCGTGTCGTGTCGTGCCAGACCGCGGCGCATTTGGTGTCGGCGGCGACGATCACCTACGCGTTCGCCGTCCACAGAGCGGCGGCGGTGGCGACGGCATCGCTGCTCCTGCGGCCGTGGTTCGCCGTGCTGGTGGTGTCCACCGCCGTCGACAGGCTCGCCTGCGTCGCGCTCGGCATCATCGCGGAGCGGGACTTCGTCGTGCAGGTGACCGGAGCTCCCGACCATCTCCTGCCATTGATTACATAGCTCGTCGTTGCTTTCTTCAACATCTCTCCAATGTTTCTCCAATCTCCATGGATCGTGTGGTTGAAGCTAGCAGGGGCAGGCAGGCCGGTGGCGCTCGCCAATGCCAACGCGACGCTCAGCAGAGTCGATCTCCTCTGCGAGGTCTGCAATTTCTGAATCATCTTCACTTGCCTATGAATGAACTACGAAATTTTATTGAATCTGATGAAATTTTCGTGTGGTTTGCAGACGGTAGGAGCATCCATCTTCGCGTTGCTCCTCTCCAAGAACGACCCGCTCACCTGCATCAAGCTATCCTGCGTCATCTCGCTCTGTCAACTGCCCCTGCTGGTACACTAGCTCAATTTAGTAAATTGTTGTGCTGATTTTGTACATTATTAGATTTCGAATTTAAACTTGCATATTTATTGAGCGATATGTCTCATATTAATCTATCTTTTCATTTTTTTTTAAAAAAATATAATTATTTAGGTGATGTGAAAAAAAGAAAAAAGGGGATGAAATGAAAACATTCTCTCTTCTAATTTCGCAGATTTTCCTGTGTGGAGAGATGAACCGGCTGGCTGACGGCATCTTCGATCACACTGAAAATACAATCTCACACGCTACTGCTCCTACTTCAAGTTTCAGCATAGGAAAAACTGGTGATTGATTCATTCAGCTTGCAGCCTACTAGTTCCACAACTGTTCATCGATCAGTATCAGATATTCAGATTGGAGAATATTTTCATCCGTGTACTGATTTTCTCTCATTGTTTCTTGATCAATCGTTTGACAGTGGCAGAGGCTGTGGATACCGTCAGGAATGGCTGGAGCGAGTACATGCGGCAGCCGGTGCTCCCGGCGAGCCTCGCCTACGTGCTCGTCTGCTTCAACGTCGCCCTCGCCCCCGGCGCGCTCATGACCACCTTCCTCATCCACCAGGGTGAGATGACGCGCATGGTTACCATTGCTGACATCATCATCATCAAGCTCCTCTTGTGTTTGCAGGCGTGAGGCCGTCGGTGATCGGCGCGTTCGGCGGCTCGTCGGCGGCGGTGGGGATCCTCGCGACGTTCGCGACGGCGAGGCTCGTGAAGGAGCTCGGGATTCTCAAGGCCGGCGCGGCCGGCCTGATCGCCCAGAGCGCGCTCCTCGGCGCCGCGGTCGTCGTCTACCTCACCGGCGCCGTCTCACGGCGAGCCGGCGCGCTCTTCGCCTTCCTCGGATTGATCGTAAGAGAAGGATCGATCTCCGATTCTCCATTGCTACAAGAATTTAACCTGGCTGTCAAGAATTGATTTCCATGGCGTGGTGGCGCGCGCAGGTGGCGTCGAGGGCGGGGCACATGGCGTACAGCGCGATCGGGCTGCAGGTGGTGCAGACGGGGAACCCGGCGAGCAAGGCGAAGCTGATCGGCGCCACGGAGATCGCCGTCGCCAGCCTCGCCGAGCTCGCCATGATGGCCGTGGCGGTGGTCGCCAGCGACGCCTCGCACTTCGGCGCACTGGCCGCGCTCTCTGCCACCGCCGTCGCCGCCGCCACCGGAATGTACTGCCGCTGGCTGGCCAATCCCTCCGGCTCCGACGAGCTGAGACGGATCTTCCCGTCCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018872

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018872&oldid=47628"