BGIOSGA018873

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018873| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018873, complete gene.| tag = OsI_183...")
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Gene Name

BGIOSGA018873

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018873, complete gene.

LocusTag

OsI_18326

Ensembl Transcript ID

BGIOSGA018873-TA

Ensembl Protein ID

BGIOSGA018873-PA

Length

3984

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2025823..2029806

Sequence Coding Region

2029684..2029806,2029488..2029586),complement(2027249..2027353,2026973..2027161),complement(2026373..2026453
,2026114..2026182),complement(2025823..2025846

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2025823..2029806 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2025823..2029806 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCCGTCTCCTCCCTGCCTCCTCCACGTCCTCCTCCCTGTCGCCGCCTCCTCTTCTCGGGGCCTCCGCCGCCGCCGGCGGCCTACTACCTCCTTGCTTCGCTGCTCCTCGCCGTCGGCGGATACAGCGTCGTCGTCGTGGGAGGGTGGCCGCGAGTACGAGCCCTCCTTCGCCGACGACTTCCTCCTCGCCTTCTTCCGTGCCAAGATGGTGGAGGAGGTTGGATGGGATTCTGAAAAGCCTGGCTACACTGGACTGATTGAAGTTGCCAACCGCCCCATGGTCAAGGGAAAGAGTGCGTTGGAGATCGAGCAATCAGCTGTCCGAGTACTCCGATCGCTGTTTCCCCCTCTCTTGCTTGTTCTTTTCAAGGCTCTTTTAGTACCAATTGCTAATGGTCAACTAGCTTCCATGATGGTTGGTGAGTTCACTCGAGTGACATTTTTTTTTGAGATAATCCAAAAAATGCTATTGACAAGCGTCCAAGTTCTAGAAATGCCATTAACAAGTGTGTTCGTTGAGAAGTGCAAATATTTGGAAGAGAGCAAATGTCTTGGTATGTGTATCAACACATGCAAACTGCCAACTCAGACATTCTTCAAGGATCACATTGGTGTTGATTTGTACATGGAACCAAACTTCGAAGACTATAGCTGCCAGAAGTCGGAGATGCTCTCAGAATAA</cdnaseq>

Protein Sequence

<aaseq>MAAPSPPCLLHVLLPVAASSSRGLRRRRRPTTSLLRCSSPSADTASSSWEGGREYEPSFADDFLLAFFRAKMVEEVGWDSEKPGYTGLIEVANRPMVKGKSALEIEQSAVRVLRSLFPPLLLVLFKALLVPIANGQLASMMVGEFTRVTFFFEIIQKMLLTSVQVLEMPLTSVFVEKCKYLEESKCLGMCINTCKLPTQTFFKDHIGVDLYMEPNFEDYSCQKSEMLSE</aaseq>

Gene Sequence

<dnaseqindica>1..123#221..319#2454..2558#2646..2834#3354..3434#3625..3693#3961..3984#ATGGCGGCGCCGTCTCCTCCCTGCCTCCTCCACGTCCTCCTCCCTGTCGCCGCCTCCTCTTCTCGGGGCCTCCGCCGCCGCCGGCGGCCTACTACCTCCTTGCTTCGCTGCTCCTCGCCGTCGGTAATGATATAACGCCCTTGCGTTGATAGGCAAGATGCGAATATATAACTGCTGCTGCTGCTAATGTTGTTTGATTGATTTGTTTCACTTTGTGCAGGCGGATACAGCGTCGTCGTCGTGGGAGGGTGGCCGCGAGTACGAGCCCTCCTTCGCCGACGACTTCCTCCTCGCCTTCTTCCGTGCCAAGATGGTGGAGGTGATAAGCTCCATCACCCCAAACTACTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAACAATGGTTGCCCCTTCCTAGTGCTTGCTTGGTGGTAGCATGGGTGATTACTAGCAGAAATATTAAGGGAGTTACGATAGGATTATATATCCTCCCGAAAAAGAAGATGACCACTACTACTTGCAAATAATCGAGCAATGTCATATTGATGATTGATTAATGCTGTTGATCAGTTTGTCGATAAACTAATAGCTATTCCCTAACTCCCCTATCAGCTCAAAATTTCTTATTAGTACCTATGATTTGTATAGTGTATGTCTGCAATTCTATTAGCGAACACGTAAACGTGTGCGTTTGTACGCTCTTTTTTTTTAACGATCCACGCACAAGAGAAGATTTATATTGATATAGCAGGAAAAAATTACAACATTACAACCGAATGATGTTATAATCAGGAAAAGGAGAGTAAAAGACCACTCCACCACGTGCTAAGGCTCCAACCGCACTCCCTGGAGAAGCACTAGCACCAAGTCAGCCACCGCTATGTGTGACCGATCGCCGCTAGCCCTACAAGGGGATCGCAGACGCTCCCGCCTCGAACCAACTTCACTAATAAGGTCAATGACAGACTCCCGGCCACTCTCATGGAAGGTTTGAAGGTGAGGGTGAGAGAGAAGAAAGATCCGCTCATCCTCGAGCCAACCTAGAGCCGAAACCAAGAGAACGCCTAATCAGGAAGAAGGCAGTGAAGGCAAGGGAACATGACCTCCTAGGCAACGCCTCCACGATGGTTGTGACGCCAAAGGCGCCACCTTCGCCTGTCCACCTTGGACTAGATTTTCACCTGGAAAGTCATGTTAGGAAAGGAGAGATGGCAGCTCAACAAAGTCCTCAGGGGAGCACGGCGCCAAGAGATGTCGTCATTGTCGACCCGAAAATCGAGCTAGGATTTCGCCCGCCGTATTAGCTCCCACCCAACCGTTGCCATCCCAAAGCTCCGCCACCCGGACGACCTCCTCCAACACGTGGGCTTGTCGCACCAACACCCTCCGCCGGCCAACACCCTAGTCACAGCCCTGGTTTGCGCCCTACACCGGCTCGCCCTACACGCGCCGCAACAGCCTCCCACCAACTGCCAGTCGCATCTTCATGCGCTGCGCCGGACTCCGCACTGCCGGCCACGCCTCCAAGCGCCCTTTCAGCCTCCGCCGCCTCCGGCCATGCCACCCCGCGGCCTGCCTCCTCCTTCCTCGCCTCCATCTCCGGCCGCCGTTGTCGTCCGCGTGCTAGGCCGACTGCGCCTGCACCACCCTCTGCCACGCGCAGGCCTCGACGCCGGCATCGCTCTGGCCATCCTCCATCTTTGAAACCTCCATGCCGGATCTATGGAGGTCACCGCCGTGAGCACTGCCGTGGCCATCCTCGCGATCCGTTGGCTTTGTCGGCCACTCACTTAGGCGGCGGCGAGGTAGAGGGGAGAGCTGGAGAAGGATGGTGGCTGTGACTAGGGTTTCCGCCTGAGTTGCCCGACGCGGGGAGCAACGCGGGCAGGGGGTGTAGACAGGCATTCCTCTAAGGCCTACTAGGACCGTGTGTATGTTGTATTCTTAGGGGTGTTCAGATCCAGAGATATAAAGTTTTGGCGTGCCATATCGGGTATTATATTGGGTATCGCATGGGGTGTTCGGGCACTAATAAAAAAACTAATTACAGTATCCGCGAGACGAATTTATTAAGCCTAGCACCACATTGTCAAATCATGGAGGAATTAGGCTTAAAAGATTCGACTCATAAAGTAGTCGCAATCTGTGCAATTAATTATCTTTTTAGTCTATATTTAATACTATGCATGTGTTCAAACGTTCTATATGACATGATGTAAAATTTTGGGTGGGATAAACAGGCCCTTATGGCATGTTCCCTGTGTATGGCTGACCCAATTAGAGTTTGTCACATGTACATGTGCTTATATATGTAACGTGACATGATCAGTACAGGTGTGCATTGGATCAATTCTCCTTCTAGCTCTCTACCGTGATACAGTGCCGAGAATGGATCCATGTTTTTCACTTCTGCTCTGCTTGTTTGTCCATTGGTAATTCTCTCATCCTCTGTAAATTAAGCTGTAGGAGGTTGGATGGGATTCTGAAAAGCCTGGCTACACTGGACTGATTGAAGTTGCCAACCGCCCCATGGTCAAGGGAAAGAGTGCGTTGGAGATCGAGCAATCAGCTGTATATAACTTTCTCATGTCCCTAATCTCTCTGATTGCCCCCTGTATCCTTTTGAAGATAAAATCAATCTCTCTTTGTAAATTTCAGGTCCGAGTACTCCGATCGCTGTTTCCCCCTCTCTTGCTTGTTCTTTTCAAGGCTCTTTTAGTACCAATTGCTAATGGTCAACTAGCTTCCATGATGGTTGGTGAGTTCACTCGAGTGACATTTTTTTTTGAGATAATCCAAAAAATGCTATTGACAAGCGTCCAAGTTCTAGAAATGCCATTAACAAGTGTGAGTTCCAAAAAATGCCATCGTACAAAAACGGCGCAAAATGGACGGAACCCTAACGGCTATGGCATTTTTGGGACAAAGTCGTTTGTGGCATTTCTTGGAACTCACACTTGTCGATGGCATTTCTAGGATTTGGACGCTTGTCAATGGTATTTCTTGGATTATCTTTTTTTTTTTGTCATTGTTCATTTGTTGGTACCTTTTAGACTTACAGTAGGAATCGGTGTAAATGTTACTATCTCCGTCTAGCTAAAAGTTGTTATATTTTGGGGCGGAGAGAGTTTTCTTCTGACATGCTGCGATTGGCTTACTGATTCTTTTAAATACATTGGATGTGAAGCTAGAGCAACAACACTTTCAAGCCAATGGCTGGTGGGGCCATGTTCGGTGAATTCTGTGACATTATCCAATGGAGAATCATTGTCAAGCGGGGTATCAATCTCTTCTTCGGACTTTTTGTTTATCCTTCACTCACTGAGATTTTACAGTTCACCGACATTACGTGATGGAAACTGTCAGGTGTTCGTTGAGAAGTGCAAATATTTGGAAGAGAGCAAATGTCTTGGTATGTGTATCAACACATGCAAACTGCCAACTCAGGTCTGTTCAAGTTTTGTATATCATGGGCATTGCAAGATCGTTTTAGAATAATTTAGATGCGTGGGATGCCTAGTTTTATTTGCATTATCACTGTCGATGTCACATTATTTTGGAGTACAAATCTTGAAAACCTTTTTGTTCTGAATTTTTCTGTATTCTCTTTGTATGGATGCCATTTTCTGTTTTCCAGACATTCTTCAAGGATCACATTGGTGTTGATTTGTACATGGAACCAAACTTCGAAGACTATAGCTGCCAGGTAATTCATTTCGTGATTTACATCTTACTACACTAAAACAAAACCAAAAAAAAAATATTTTCCACAGACTAGATACATACTAATTTTTGTTCTTTGTCAAAACCAAATATCATGATAAAGCACAATGGAGTTTTCTACCTCGGCACATGGGTAGCATTCTAGGCTATGATTAGAAGGCTCCTGAAGTTTCTTTTGTTCCTGCTATTTTGGATGATGTGTTTATCTTTTGTTTCTTTCTTGTTGGCTATGTGCACTTTTTGGGTGCAGAAGTCGGAGATGCTCTCAGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018873