BGIOSGA018898

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018898| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018898, complete gene.| tag = P0683F1...")
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Gene Name

BGIOSGA018898

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018898, complete gene.

LocusTag

P0683F12.2

Ensembl Transcript ID

BGIOSGA018898-TA

Ensembl Protein ID

BGIOSGA018898-PA

Length

5482

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1579117..1584598

Sequence Coding Region

1584530..1584598,1582259..1582400),complement(1581861..1581985,1581700..1581744),complement(1581527..1581575
,1581325..1581434),complement(1580989..1581065,1580717..1580767),complement(1580579..1580643
,1580235..1580389),complement(1580086..1580126,1579958..1580012),complement(1579488..1579544
,1579117..1579149

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1579117..1584598 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1579117..1584598 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACAAGGTTGCACGTTGGTGTGAAAAGAAAATTGTACCCATCCTACTTACATCTGTCATCCGGTATTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCCGCCGCCATCGACGCCTCCAACCATTTCCCCAAGGACGTCAACCTCTGGAAGCTCATGGGCGATTTCAATCTCCACGGCCTCACCGCCCCAGAGGAGTATGGTGGGATGGGGCTCGGCTACATGTACCACTGCATTGCCATGGAGGAGATCAGCAGGGCGTCCGGCTCGGTCGGCCTGTCTTACGGCGCTCACTCCAACCTCTGCATTAACCAGCTGGTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGCTAATCAGTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTCTGGTTCTGATGTTGTCAGTATGAAGTGCAAAGCTGAGAAAGTAGATGGTGGTTATGTCATTAACGGGAATAAGATGTGGTGCACCAACGGGCCATCTGCTCAGACACTGGTTGTGTATGCAAAAACAGATATAGCTGCTGGATCAAAAGGAATAACCGCGTTCATAATTGAGAAGGGGATGCCCGGGTTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGCAGGTCCTATCGGCCTCATGCAAGTATGCCTTGATGTAGCTGTTCCTTATGTTCGCCAAAGAGAGCAATTTGGCCGTCCAATTGGTGAATTTCAGTTCATACAGGGGAAATTGGCAGATATGTACACCTCCTTGCAGTCATCAAGGTCATTTGTTTACTCGGTTGCTAGGGACTGTGACAATGGTAAAGTTGACCGCAAGGATTGTGCTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGGCAATACAGTGTCTTGGTGGCACGGATACATAA</cdnaseq>

Protein Sequence

<aaseq>MNKVARWCEKKIVPILLTSVIRYFKESVHKFAQETIAPHAAAIDASNHFPKDVNLWKLMGDFNLHGLTAPEEYGGMGLGYMYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKLKYLPKLISGEHVGALAMSEPNSGSDVVSMKCKAEKVDGGYVINGNKMWCTNGPSAQTLVVYAKTDIAAGSKGITAFIIEKGMPGFSTAQKLDKLGMRGSDTCELVFENCFVPHENVLGEEGKGVYVMMSGLDLERLVLAAGPIGLMQVCLDVAVPYVRQREQFGRPIGEFQFIQGKLADMYTSLQSSRSFVYSVARDCDNGKVDRKDCAGVILFAAERATQVALQAIQCLGGTDT</aaseq>

Gene Sequence

<dnaseqindica>1..69#2199..2340#2614..2738#2855..2899#3024..3072#3165..3274#3534..3610#3832..3882#3956..4020#4210..4364#4473..4513#4587..4641#5055..5111#5450..5482#ATGAACAAGGTTGCACGTTGGTGTGAAAAGAAAATTGTACCCATCCTACTTACATCTGTCATCCGGTATGTATGTAATGGACCAGCAAATGCGGAGAAACAAATAATACAGTACCTACGATTAAACCGGACGCTGCCTGAACATAAGAGAGTAAACCTAAAGTGGGGCATGGGGTTTCCAAATACAAATATTTTTGGGGAAAAGCTGTTATTACTACTAAGGCTAAGACAAAGAGAAAACCTAGCTTAATTCCAGATATAGAAGAGAGAAGGTAAGGTAAAGAGATAAGGTGTGGGTAGAACGAGAGGGATGAAAAAGAAGACAGGATTCGACACGCGCAGGTGCTCACCGGAAACAGCAGGATAGGTGGAGACCGGCGCAGGTGGCGGGTGAACTCGCGAGGAGACGGTAGTCGAGGCCGAGGGAGATCGACTTGGAGGCGGCGCCGGCGCCGGCGCCGGCGCAGTCGCTCTCGCGCAGCGGACGGGGAGGGGATGCTGCCTGTGCCTGGAAGGGAGAGTGGAGCTAGGGTTTTTGGTATACTATAATGCGATTGGGGCTTTGGGCCTTCAATTCCTCGCTGCGCTGTAAGTCTATTTCACATCCCTCATCCCTTAATCCTAATTGAACCATCTGCTTTAACTGCAAAATCGGGTATAACGTCTCCCTATCTTCAAAAATCAATGCAAATCGACTTCTTTAATGGTTTGGTGAGTGATTTTTTCTAACGCTGCAAGGGTGAAACCCACATGCTTTAAGGAAGATGTCCTCCCGTGACTCCTTGGTAGCCCAAGACTACCCCTGATGTCAAGCTGCCTCCTCCAAGTCATCGGTTGCCCATATTCCCTAATAAGGCAAAACGTATCGAGGAATAAAAATTAATTTATAGTTAAAAATTTTATATATTTGTTCGTAGTGACTTAAAACCAGCGGAGTGATTGATCTCTTCTTGTAATCTGTTGCAGGAACAACTCCACAAAAGGATTGTTGTGTGGCATGATGAGATAAAGCTACATGGTGACTAGAATGCAGGCATGACGGATACAAGTTGTTAAACATTCTAATCAAGCTTTCTGGTTAATTTCTCTATGAATTTAAATATATATTGAGATGTCTCTTTCACGCAAAATATACGAAAATATATAGGATCTTGCCTCTTCCCATGTAGTACCGCGCCACCACACAATCTTGCCTGTTTTTATTTGCCGCTTGTCAGTGTGCATCACCAATCAAAACAGGAGGTGTTTGGAACCCCGTCTGTGAGATCTTGCATCAAAAGAAGATGAATAGGATAACTTTAGGAAGCACTCCACTCCTGTGATGTCCACCATGACTCGAGCGCTAACAAGTTACTAGTATTATCGGTACCCTTGTACCGTGTATCCTGCATTGTCTACATACTAGTACTTGTTGCACCTGTGTCTAATCCTTTTACGCGGAACCAATACGTTTTGATAATATATTTGTTTTGCGTTGAAAATACTGCTATATTTTTTTTATAAACTAAGTTAAATTTAAAAAGATTTGACTAGTAAAATTATAAAATGAAACGAAAATAGTGCTAATGAGCAATTATTTTAAAAAAAGGAGTAAGCAGTACTCCATATATATCTAGATAAGATAAAGAAAGGAGGTCAGTGAGTCAGCAGAGTACCGGTCTACCTCTGCTGCTTATCTGAAATTTCGGAGTCTGAACTTTGAAGTTTGAACTGCACCGCATCGTCGGCTCCAACTCGACAGGATAGGAGCCAGACCACCCACCTACCTACAGTACTCCACCAGATCAATTCCAACACGCCTCTCTCTCTTCTCTGATTGATTACTACTCCACTACAGTACTAGTCCAAGGCGGGCGGAGACGGCGACGGATTGCGCGGGCGCAAGCAGCACTCAAGTTCGCTACTCCTCCTCCTCCTCCCTGTGTAGTGGAGCGAGGCGAGGCGAGCCGACGCCATGGCCGCGGCGCAGCGCTGGCTCCCGGGGATTCTCCGCCGAGGGGACGGGCTCGCGCGGCGCCTCTAATCCTCCGTCTTCTCCCTCCTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCCGCCGCGCCGGAATCGTGCGTGCTCATGGCTGGATGTATATGTTGTGCAGTTCAAGGAGAGCGTGCACAAGTTCGCGCAGGAGACCATCGCCCCGCACGCCGCCGCCATCGACGCCTCCAACCATTTCCCCAAGGACGTCAACCTCTGGAAGCTCATGGGCGATTTCAATCTCCACGGCCTCACCGCCCCAGGTCTCTTGTGTACAATTGATACTCTCATCTCTCAATTTTTCATTTGGTATGTCTGCTGCCCTAGTCGACACAATCTCGTCAAAATGTGCGCTCAAAATTTGTTACAGCAGGTGTCGAATTTGATTTAGATTTCCGTCAAATTTTGTTTTAGATATGCAGCAACATGGTGACATGTACGCCCATGTCTCAAATCTGTCTCATTGCCGTTGCCAATTTTAGCTACACATGCCTGCACAATGATTTAACAAGGCCACCATGTTCTGTTCTATACAGAGGAGTATGGTGGGATGGGGCTCGGCTACATGTACCACTGCATTGCCATGGAGGAGATCAGCAGGGCGTCCGGCTCGGTCGGCCTGTCTTACGGCGCTCACTCCAACCTCTGCATTAACCAGCTGGTACTGTTCTGTCTACTGTCATTGTAACATGCCATGAATGAGCCATTACAATTGGACAAAACAATCTCTGCTCAATACAGTTATGAACTTGTGATGTGTCTGATGTTTGTTTATAGGTCCGGCATGGCAGCCCTGCCCAAAAGCTCAAGTACTTACCAAAGGTGCTTCCCCAAATCATCAACTTGTACTGCTTCAGTCAGACTCCAGTGTTAAACAATTTACTCATTTAGTGTTCTCAGTGACTGATAATGGATCCTGTTAATGTGTTTTACCTTTTCTCTAAAGCTAATCAGTGGGGAGCATGTGGGGGCATTGGCGATGAGCGAACCCAACTGTAAGTATCATTTGGTCTCTTTACTGTGCTGTTCCAGTCCTTGGCAGGATTTGTGAGCTAATTCCTTCTGGCATGCCTATTTCTACTTTCAGCTGGTTCTGATGTTGTCAGTATGAAGTGCAAAGCTGAGAAAGTAGATGGTGGTTATGTCATTAACGGGAATAAGATGTGGTGCACCAACGGGCCATCTGCTCAGACACTGGTAATGCTCTCAAGTCCTTTTGTAGATTCACTCCCTCATGATATCTCCTTTCATGTTCTGTTTTCCAGTCATTAGCTCTGCTGGGTTTTTGTCTCTTGGTGTTTCAACGAGTTTCATTTGGCTGCTCTTGCCTTCGCAACAACTGTATCTGCAGATCCAAAACATCTCTTAGCGGTAGCTTCCAGAAAAGCAAGTTATGTCTGTTTATAGGTCTATAGACATAATAAGCCTGCTAGTTCACTAAAGTTGGGAGTTTCAGGTTGTGTATGCAAAAACAGATATAGCTGCTGGATCAAAAGGAATAACCGCGTTCATAATTGAGAAGGGGATGCCCGGGTAAAGAACTACTCCATCACCTATTGTTATGCATGATCGTCAGATATGTTACTATAATATTCTGGTCATGTAAACAAATATGAGATAGATGATATCATGATATTAAAAATGATTGAAGCTAAGACCAAGGCTTTGGATGGACAAAAGTTTAGGATTATTATAAATTATACTGCAAAGATGTTTATCTTCCAGAATTTTCACTCTGAACTGCACTTCTGCAGGTTCAGTACTGCACAGAAGTTGGACAAGCTTGGCATGAGAGGAAGTGACACGTATGTTTTCTATTTAAGAGGATAACCAAAAGAGTTGCATTAGATTTGTATCTTACATATATTTTTGACACAGATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGGTATTAACTGCTGATTGTCGTAAACTTAGTCAGAATTCTTGTTGCTATCCTGAGATATTTATTCAGTTGTGTACAGTACAGTTGTTTGCATCTACCAAACTGCCACTGTACACACAGAAAACTGTCATAATTCTAGCCATTGATCCTGTTATCATCCTCAAAGAGTGAACAGTTTTTTTCTTGTTGCAGGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGCAGGTCCTATCGGCCTCATGCAAGTATGCCTTGATGTAGCTGTTCCTTATGTTCGCCAAAGAGAGCAATTTGGCCGTCCAATTGGTGAATTTCAGTTCATACAGGTATATCCAGGAAACTCTTACATATGTCCTGTTTTATCCTGTTTCTAGGTGCAACATTTTGTTAACAGACGTCTGGTACCAACCATAACAAGTTATCTTTTAATGCAGGGGAAATTGGCAGATATGTACACCTCCTTGCAGTCATCAAGGTATGCATATCTTCTCAAGACTTATACTGACAGGTTTAAGCATATCCTTACTGCAGCTTTCTTTGTTGTTTAGGTCATTTGTTTACTCGGTTGCTAGGGACTGTGACAATGGTAAAGTTGACCGCAAGGTACTTCTCGAAGACCCTACGCTATTAGTCCCTCCGTTCCAAAATAAGTTGATTTCTAGCAATTGGGATTCAAATTACTATGGAGGGGAAAAGACCAAAGTGGCCCTCATTAATATGAAAGTAGTATTGGTGAGTTGGTAGGTAGGTAAGGGGTATTGAAGGGATAAACCTCTTCCATTTGTGAACCAACGGTAGGTAAGAGTATAGAAATCAGCTTTTTTTTTTTCGGGACAAACGTTAGAGTGTAGAAACCAACTTATTTTAGGACGGAGGGAATAAATGCTTAATTATTGCATCGCCTTCATGTAGTTCTTCTATTCACAACAAAACTGTCTTCATCTCATCTAATAATTATCATGGTGGTAAACTGTCTTCATCTTCATCTATATAATAATATTTTTTTTATTATTCAGGATTGTGCTGGTGTGATTCTCTTTGCTGCTGAAAGGGCAACCCAGGTTGCACTTCAGGTGAAAACCTTGTCTTCATTACATTGGATTCCGTGTTCGCTCTGTTTTTTTCCTCATGAATTATTCGGAACACGATGATTTGGCCCTATTTAGTTTTCTTTTGTTTGACAAATATAGTTGACTTATCAAAACTGGCACTTGTCATCCCATTACTGTCATTTGTCTTCCTCGGAATTCTGCCGCACTATTTCACTTTGGATCTTTCGTTTCTATGAGATTAACAATTTGTAACTTATGTTCTTTTAAAAAAAAAATCAAATTTTAAACTAGTTATTTTCAGTATTATCATTTCTTTTTTGTGGTCTACTAATTAATCTTAAACCTTCTTACCATGGCAGGCAATACAGTGTCTTGGTGGCACGGATACATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018898

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018898&oldid=47654"