BGIOSGA018900

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Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018900| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018900, complete gene.| tag = OsI_182...")
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Gene Name

BGIOSGA018900

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018900, complete gene.

LocusTag

OsI_18270

Ensembl Transcript ID

BGIOSGA018900-TA

Ensembl Protein ID

BGIOSGA018900-PA

Length

3968

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1508696..1512663

Sequence Coding Region

1512457..1512663,1512293..1512367),complement(1511664..1512173,1510924..1510983),complement(1510490..1510581
,1510343..1510392),complement(1510195..1510256,1509435..1509565),complement(1508696..1508720

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1508696..1512663 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1508696..1512663 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGCTGGACCTCCCGACCAACTCAAAACCAAAGAAGACAGAGAAAAATGGTGGAATGAAAACTGATTTACATGAAGATAATGGCCAAGTTGTAGATGTAACAACAAAGACCGTGCTGGATCCATGGAATCCTTATTTTCCTTTATGGCCACCAGAAATTCTACCAAATCTTGGTCTTAATGGAGCTATCTGTTTCATCGAGGATTGGAAGATGAAAAGGATGGCGTATCTTGCTTCCTATCAATCAACATGTGTAATCAACGCCGCCTACACCCCTAAGGCAAAAAATATTGAGTTCTATGGCATGACTTATCGTCTCCTGGAGCCCATCTTGGAAAAGGATAGCCGCTGCTGTTTCCTCCGCTTATTCGTCAAGCGCATGCATAGGCTGATTTCTGGCTTTATCATCACTCCTGAAACCTTGAACTGCGTCATCATAAAAAATGCCATGCGATGTGCCAAAGTTATCTTGGAGGGCCAGGCTCCTGAGTTCGGAGGGTTCCGAGCTAATCCTAACTGCATGAACCAATATGGTTATTTTCCCCTTCATGAAGCTGCTGAAAGTTTCTCTGTTGACATGATCAAGTTGCTCATATGCCATGGTGCATTGGCTAATCTACGCACGTCTGGCAAGAATGTCAAAGAGGGCCTACTCCCACTACATGTTGCAGTTGAAAACACTTGCTTGCATAAGTATTTGGAGGAAAATCTGTTTCCTAATCAGGAGCATCCAGATTACAGCCAGGAAGATATCTACAAAGCTATCCATCTTCTGTGCCTACCTGAGATGTTCTGCTCCTGGCAGCTCAAGATCATATCCGCTCTGGATCATCCTGCAGAAAAGTTGGTGGTGCCACATACAGAGGTCCTTGAACATGTTTCATTGATCCTAAAGGGTTTTGATTTCTGTCCCACTGGAGAAGGCATTGACGTTGGAAACATCTGCCCTTACACATTACCGATGCCCAACAAGGAGGTACCTGACAAATCTGGGAGCTCGGTTGCAAGCAAGGCAACTACAGATGTGCCTTATCTGCTTGCTGTAAAGAAAAAGATTCCTTCGATGAAGCGAAAAGGTTGGGGAGGTTCTATAGTCCTCCTGATGCCTAATGCTGCTTTCCGCAGCAAGAGAAAGATATCAAAACATCCTCATTTTTCACGTGCGGCTTCCCAAACTGCTAAGCGGTGCTTGGGAAAATTTCATATATAA</cdnaseq>

Protein Sequence

<aaseq>MRLDLPTNSKPKKTEKNGGMKTDLHEDNGQVVDVTTKTVLDPWNPYFPLWPPEILPNLGLNGAICFIEDWKMKRMAYLASYQSTCVINAAYTPKAKNIEFYGMTYRLLEPILEKDSRCCFLRLFVKRMHRLISGFIITPETLNCVIIKNAMRCAKVILEGQAPEFGGFRANPNCMNQYGYFPLHEAAESFSVDMIKLLICHGALANLRTSGKNVKEGLLPLHVAVENTCLHKYLEENLFPNQEHPDYSQEDIYKAIHLLCLPEMFCSWQLKIISALDHPAEKLVVPHTEVLEHVSLILKGFDFCPTGEGIDVGNICPYTLPMPNKEVPDKSGSSVASKATTDVPYLLAVKKKIPSMKRKGWGGSIVLLMPNAAFRSKRKISKHPHFSRAASQTAKRCLGKFHI</aaseq>

Gene Sequence

<dnaseqindica>1..207#297..371#491..1000#1681..1740#2083..2174#2272..2321#2408..2469#3099..3229#3944..3968#ATGAGGCTGGACCTCCCGACCAACTCAAAACCAAAGAAGACAGAGAAAAATGGTGGAATGAAAACTGATTTACATGAAGATAATGGCCAAGTTGTAGATGTAACAACAAAGACCGTGCTGGATCCATGGAATCCTTATTTTCCTTTATGGCCACCAGAAATTCTACCAAATCTTGGTCTTAATGGAGCTATCTGTTTCATCGAGGATGTACAGTAACTATCTCTATTCTATATTAATTCCTTCACTCCTTTCTTACCTTGATAGTGAATTTTGACAAATTATCTCCATAATATCAGTGGAAGATGAAAAGGATGGCGTATCTTGCTTCCTATCAATCAACATGTGTAATCAACGCCGCCTACACCCCTAAGGTCCTGCAATATTTACTAACATTAAGATGCATTGTAGCAGGATTTTATGCTTTCTTTTGCTTTATTGATGGGACAATTGATTGTCTTTCACCTCCCTTTTCAATTGGCAATTAATCCAGGCAAAAAATATTGAGTTCTATGGCATGACTTATCGTCTCCTGGAGCCCATCTTGGAAAAGGATAGCCGCTGCTGTTTCCTCCGCTTATTCGTCAAGCGCATGCATAGGCTGATTTCTGGCTTTATCATCACTCCTGAAACCTTGAACTGCGTCATCATAAAAAATGCCATGCGATGTGCCAAAGTTATCTTGGAGGGCCAGGCTCCTGAGTTCGGAGGGTTCCGAGCTAATCCTAACTGCATGAACCAATATGGTTATTTTCCCCTTCATGAAGCTGCTGAAAGTTTCTCTGTTGACATGATCAAGTTGCTCATATGCCATGGTGCATTGGCTAATCTACGCACGTCTGGCAAGAATGTCAAAGAGGGCCTACTCCCACTACATGTTGCAGTTGAAAACACTTGCTTGCATAAGTATTTGGAGGAAAATCTGTTTCCTAATCAGGAGCATCCAGATTACAGCCAGGAAGATATCTACAAAGCTATCCATCTTCTGTGCCTACCTGAGATGGTTTGCCTAGCATCTCTCCCTTAATTACTAACTACTACTCCCTCCATATAAAAATATAAGGCATATTTTTTTCTTGTTAGAACAAAGCTTTGACCAACTATTGCTTTATTACTAATATATCATTTATGTCACACAAAAGCATAATCATAAGAAAGTACTTTTGAATATGAGTCTAATAACATCAACTTTGTGTTGCAAAAAATATATTCTAACGAAGTAATTGTTGGTTAAACCCTTGTTCTAACAAAACAAAATATGCCTTGTTCGGAGGGAAGTATCTTTTGAAGCATAAGTAAGTAAGAAGTTGTTGCGATCAATATGTAAAAAAAACTGATAGTACTTAATATCTGGTATTATCTTATATTTCTACATAATAGTGAGCAATTCGTTAGTATTGTAGTGAGCATTTGTGTCTGGACCATTTTTAGGTTGAGTTTATTTAATAGAAAAGAAGAAAACACTTTCAAGTTGCTCTCAGTAAATCTTAATTCTCAAAGTATGATATTTTAGGTAAATGTGGTGATAAAGCTGAATGCTAAGCTGCACCTGTATTTTGTATTTCATTGGTGGTTTTTGCAGAAGATCTTCTTGGATACTACTAGATAACTTGCAAAACACAAACAATCTAGTCGATGAGGTCTGGAATTACATGAAAGATGGAAAACTTATCCATTCTGCAGTTCTGCTCCTGGCAGCTCAAGATCATATCCGCTCTGGATCATCCTGCAGAAAAGTTGGTGGTAATAAGCTAGATGGTTTTGCTACTATCTTTGCTCGTATCCATCACTCTATGGCCTTAGAATGGCAGATGCATCAGAATGGACAAGCTAAGCTTAAACTTTTGTTGTCTTCATCGTTGCTTGTTAATATAATCTTCCGAGCCGGTGAAGCACTTGATGCATACATTCGAGAGCACTCTGAGGTACCATGCTTTTTGTGTATTGCAGATGTTATCCTCTCTTGGGGCATCTGCAGTTTCAACTAATTTGTTCATGTTATTTGCTGTTTATATATTGCTTTTCTTTCTTTGAACCTCTCTTCTCCCTTTTGTTTTTATGTAAAAGTTGGAAAATGCCATGCAGGTGCCACATACAGAGGTCCTTGAACATGTTTCATTGATCCTAAAGGGTTTTGATTTCTGTCCCACTGGAGAAGGCATTGACGTTGGAAACATGTATTCTTTTACATTCCCTTTGACTTTCTTCAATGATTATATCTTTGTATGCAGATGCATTTTTGATTTGGGATTCATTTAATTTTTTTTGTTCAAGCTGCCCTTACACATTACCGATGCCCAACAAGGAGGTACCTGACAAATCTGGTGGGTGTGGGTCTTTTCTGTGATGTCCCAATTCATTCTTTCATAAACTCAGAAAATGAACCTATTTAATTTATCATGGAAAACAGGGAGCTCGGTTGCAAGCAAGGCAACTACAGATGTGCCTTATCTGCTTGCTGTAAAGAAAAAGGTGAGGCATAATTCTTACATTCCGACCTCTGTTGGTTCTTGTTTCATGTAGAGTTTTAATTTTACATTCCTCTTGTTTCGTCTTGAATTTTTGCAAGGGCACTGCGACAGCAGCCTTAATTTTTCTATGCACATCCCTGTTTGATACATTTAATTCTTTATATTAGATGCAGGCATCTGAAATTTTATAAGGCATTATGATATCACCATAGAATGTACTCCCTCCGGTCATAAATATTTGAAGCTCAGGACAAGATTTAAACATTTGAAATTCCGACCCTCAATTTCGTATTAGAATAAGGTTATAAAATGTAATAAGTTTATGATATTATGATAGTAATTTTCACAATTTTGAAATTCACTACTAAATGCTTTAAGATAAACTTCTAAGAAAAAGAATGTAAAAGCATGTTTCACAGTTCCAGTTGCTATTTTCTGCCATGCCGTTTACTTTTTCAGCAGCCTAACATGTTGCTGAAGTATGCTACTCAACTACTACAATTTAGCAACTTTTGATCCAACATAAACAATAACACAAGTACCTTAAGTAGTATCACATTAATTATCCATCACTGATGCAAAACATCATGTATCGTACTACCATCTCAAGTTCATGCTGCTGGCTTATAGATTCCTTCGATGAAGCGAAAAGGTTGGGGAGGTTCTATAGTCCTCCTGATGCCTAATGCTGCTTTCCGCAGCAAGAGAAAGATATCAAAACATCCTCATTTTTCACGTGCGGCTTCCCAAACTGCTAAGCGGTGTGTTTTGTTTTCAAAAAGAAAAAAAATCTTAGAAAGTTGCTTTAAAAATCATATTAATCTATTTTTCAAGTTTGAAGTAATTAAATCCTTATTGCCTTATGAGACAGGCTATGAGAAAGAAGAAACCACCCCATGGATGGGAGGACAGATGCAAACTCCTAAGTTATCTTCCATTTTGGAGAACAGTACTGTCGGTCCCATGGTGTCCTGCGAAGAATTTACCAAGCCATAGATTAGAGGATCAGGACAAGCATCTCTGCCAGATCAACAATCATCGGCGTAAGTTAAGAGAGGAACGGCGTAAGTTAAGAGAGGAAGCATCTTCTGCAACTCCAAACCATAATCTTGGTTTGTTTGGAAGGATTCCACACTTGAGTATTTATCAACCAAGAAGATTATTCGCTAGTGCTGCATTGACGCTTATCAAGGTGTTAAGGAATGCATGAGTAGAAAAGGTATGCCGTCTGTTTTGATTTTCTTAAAGTTCCAGAAAATGCCAAACACAATCAGCATATATAGAAGAGAAAACTAATTCTGTTATGCCGCTTCTAATTAGTAAACAAATATAGATGCTACCTCGGTAGAAACTTGCATTTCAAATAATTAGGGATAGCATGTCGAGCTAAGAGTTTTTGTTCTCAGCCAATACATATGTAAATCCTTAATTGTTCTCCTAGACTAAAATGATTCCATCTGATCTTGTGTGTGCAGGTGCTTGGGAAAATTTCATATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018900

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018900&oldid=47656"