BGIOSGA018904

From RiceWiki
Revision as of 02:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018904| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018904, complete gene.| tag = OJ1729_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018904

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018904, complete gene.

LocusTag

OJ1729_E02.12

Ensembl Transcript ID

BGIOSGA018904-TA

Ensembl Protein ID

BGIOSGA018904-PA

Length

2688

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1414050..1416737

Sequence Coding Region

1416510..1416737,1416330..1416434),complement(1415887..1416008,1415591..1415740),complement(1414698..1414851
,1414373..1414449),complement(1414050..1414260

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1414050..1416737 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1414050..1416737 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTCATCGAGGCCGCGCTCTCCGCCGCCGCGGCAGCATCCCGCCCGGTCCTCTCCTCCGCCGCCGCCCGCCGAGCGGTCCAGCTCTCCTCCTGCGCGGCCTACTCGGCCGCCTCCGGCGGCGACATCGAGGACTCCCCACCTCTCCCGACGCCGCGGAGGGGGTCTCTGCTCGCGCGGTTCCGCGACCGCCGCGCGCTCGCCGTCACCGACATCACCGCCACGGAATGGTGCGATAAGCAGCAGGAGTTCGTGCTGGAGCACGGCAAGCCGGAGATGACGCAGGCCATGAAGGCCGGGTCCGAGCGCCATGCCCAGCTCGAGCAAGAGGTTATCGAGAGAGTCGAAGTCACCATTAGATCCGCAGAAGAATCGTGGGCAGTGAAATTCATGAACTTTATCGTCGGAGCAAACCAGTTAATGTTGGAGGGCATCACTAGGGAAATCCCCGTAATTGGGGTCGTTGAAGGTTCATGGATGATAGGTGTTATTGATGAACTCCGAATGCCTCCAGATGGTATTTCAGTCCATCCTATCCTGGTGGATACAAAGACACGTTACAAACCAACAGTTCCCTCAGAAGCACAAAAAAGAAATGGAAGGCTTCAGGTGATGTGTTACAAGTATCTATGGGACAATTTGATCAGTGAGAAATTCCCAGCAGAGAATTTCTTCAGCTATTTTGACCTGGACCCCGGTTACTTGTTATCAGACGATATCAAGCAATACATTAGATTGTTGGGGCTCAATGCAAAGACCTTAGAAGATGTATTGAAATATTTCAAGGTCACCTGCCATACACTACCACGGTCTCAGGAACAGCTGCTCTTGAGATATGAGCTACAAGCGGACAATTCCCTGCTTGAAGAATACCAGTTCTCTTATGATGCTAGGTGGCTCAAGGATCAATTTCAGGAAGTCCTCAGCTTCTGGCAAGGAGCACGGGAGCCTAAATTTGTGAGTGAAGAAGAGAGGTGGAAATGCAGTTTCTGCAAATTTGCAAATAATTGCCCAATAAATGCTTCCACATCAAGATGTTGCTGA</cdnaseq>

Protein Sequence

<aaseq>MALIEAALSAAAAASRPVLSSAAARRAVQLSSCAAYSAASGGDIEDSPPLPTPRRGSLLARFRDRRALAVTDITATEWCDKQQEFVLEHGKPEMTQAMKAGSERHAQLEQEVIERVEVTIRSAEESWAVKFMNFIVGANQLMLEGITREIPVIGVVEGSWMIGVIDELRMPPDGISVHPILVDTKTRYKPTVPSEAQKRNGRLQVMCYKYLWDNLISEKFPAENFFSYFDLDPGYLLSDDIKQYIRLLGLNAKTLEDVLKYFKVTCHTLPRSQEQLLLRYELQADNSLLEEYQFSYDARWLKDQFQEVLSFWQGAREPKFVSEEERWKCSFCKFANNCPINASTSRCC</aaseq>

Gene Sequence

<dnaseqindica>1..228#304..408#730..851#998..1147#1887..2040#2289..2365#2478..2688#ATGGCGCTCATCGAGGCCGCGCTCTCCGCCGCCGCGGCAGCATCCCGCCCGGTCCTCTCCTCCGCCGCCGCCCGCCGAGCGGTCCAGCTCTCCTCCTGCGCGGCCTACTCGGCCGCCTCCGGCGGCGACATCGAGGACTCCCCACCTCTCCCGACGCCGCGGAGGGGGTCTCTGCTCGCGCGGTTCCGCGACCGCCGCGCGCTCGCCGTCACCGACATCACCGCCACGGTAAAGCTGCATCGCCTTGTGTTTGTGTTCTTCCATTCTCAGTGATTCTGACGGCGGCGTGCGCCCTTGTGGCAGGAATGGTGCGATAAGCAGCAGGAGTTCGTGCTGGAGCACGGCAAGCCGGAGATGACGCAGGCCATGAAGGCCGGGTCCGAGCGCCATGCCCAGCTCGAGCAAGAGGTGAGCCCTGCACTGCAGTGTTGGGATCTTCCAAGCAGAATGCTGCCTTCACATTTTTCTACCTTGAAATGCACTGAAATGATAATGCCATATTGAGATTGCCATTGTTTTGTTCATCATGATGTTATACCATGCAGGATCTTATCTGAAATTAAGTCACATTTCTAGTGATTGCGTATGATTGATTTGATGTTATCATGAGCTTCATAGCCATATTGAGTTTTCTCAATTTCTGAAGAAGACAACCATTTGTTCCTTTATTTGGGAATGGGAGCTAACTACCGATTTATTTCGGTTTTGATTTACTTCATTTTGGAGCAGGTTATCGAGAGAGTCGAAGTCACCATTAGATCCGCAGAAGAATCGTGGGCAGTGAAATTCATGAACTTTATCGTCGGAGCAAACCAGTTAATGTTGGAGGGCATCACTAGGGAAATCCCCGTGTAAGCACCTGGCATGTTCTTATGTGTATACTTCTCCAAACCAGTAGTGCATCTTGGCTGCGGTGTTGATTTACAGAGGATAGAAAACATTTTTATTTCGTTAACATTACTTTCAGTAAAATTGATTCTATATCATGTCATTGCAGAATTGGGGTCGTTGAAGGTTCATGGATGATAGGTGTTATTGATGAACTCCGAATGCCTCCAGATGGTATTTCAGTCCATCCTATCCTGGTGGATACAAAGACACGTTACAAACCAACAGTTCCCTCAGAAGCACAAAAAAGAAATGGAAGGTTTGCTCTTAATCACAAAATGTAGACACCACAAAAGTATTATTGGCAGGTAGTAGTACATAGTTAAGCTTAGCTTCAAATGCGTGTTCCCTTGAATAATGAATGGTGAATGGTGATTCCCTTCAAGTGACTTCTGCTTTGATCTGGAATTATACAAAGTTGTATTTGATGCTTGATTGGTATATTAACAGTGCCATTGACAATCACACCATAGTTACAAAGAAGATTTCAAAGATCATTTTTTGCTAGAGCACACTTAAATACTTAACATTTTTCTTTCAAACAAATTTAGCTTGTACCTAGATCTGTAATGGTAGACTGGTAGTATCCTTTCATTCTGATTATAGTATCTTGTGAGTATTGTTAGGAAGCAACTCTGGGGTCAATTATTCAGTATGTGGATAAATTAATCCAAGTTGATGATACTTGGCAAGTACACCTTTTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGTAGCACTGGTATCCCATTTATTGCGCCATCTAAGAGACAGATATATCTTATTTCGTATGAAAAGGTAAATTGGACATTATCTAGAAAAAATGAAAAGGTAAATTGGTGAGCCTTACTGTTTAAGAATAAAATTCAGATGATAAGTAGTATCAGTATGTGGAGTTCTCTACTAGTTTTACTGTTTTGCCTCTCTATGATGATGCAAGCTTGCAGCTGTGAAGTTTGTATCGTTCTCTGGTTGATATTTTTGTGGCAGGCTTCAGGTGATGTGTTACAAGTATCTATGGGACAATTTGATCAGTGAGAAATTCCCAGCAGAGAATTTCTTCAGCTATTTTGACCTGGACCCCGGTTACTTGTTATCAGACGATATCAAGCAATACATTAGATTGTTGGGGCTCAATGCAAAGGTGCCAATTCCATGCCTCAAATTTTCTACACTTTGAATTGTTTCCTGTTACTGTACAGGCACTCTGATTTGAATTACCAGCTGTTTATGGGAAATCATTCCATTCCATGAGCAGTATAGTGCTAATATACTATACTGAACATTCCAGCAAGTGATTGCTAAAATTAGGATGCTCATGCTACTTTTTGACAAAGTTATAATTCTAGTATCTTTGCGAGTTGTAACTTGTGACATGGCTTCTCTTTGTAGACCTTAGAAGATGTATTGAAATATTTCAAGGTCACCTGCCATACACTACCACGGTCTCAGGAACAGCTGCTCTTGAGGTAAATATGAGTTACAGGATTACAGCCTGCACATGACCTGTAGTACCTGACTACTGAATGCCTAATCACTAGTGTAGTGAGCTCTTGCAAATGACATGCTAAACTGGTGCAGATATGAGCTACAAGCGGACAATTCCCTGCTTGAAGAATACCAGTTCTCTTATGATGCTAGGTGGCTCAAGGATCAATTTCAGGAAGTCCTCAGCTTCTGGCAAGGAGCACGGGAGCCTAAATTTGTGAGTGAAGAAGAGAGGTGGAAATGCAGTTTCTGCAAATTTGCAAATAATTGCCCAATAAATGCTTCCACATCAAGATGTTGCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018904

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018904&oldid=47660"