BGIOSGA018913

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Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018913| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018913, complete gene.| tag = OJ1001_...")
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Gene Name

BGIOSGA018913

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018913, complete gene.

LocusTag

OJ1001_G01.5

Ensembl Transcript ID

BGIOSGA018913-TA

Ensembl Protein ID

BGIOSGA018913-PA

Length

4229

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1192590..1196818

Sequence Coding Region

1196587..1196818,1196193..1196311),complement(1196039..1196115,1195609..1195696),complement(1195443..1195523
,1195299..1195355),complement(1194673..1194754,1194399..1194448),complement(1194045..1194101
,1193877..1193955),complement(1193144..1193202,1192820..1192877),complement(1192590..1192696

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1192590..1196818 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1192590..1196818 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTCCGCCTCCACCGCCGTGGCCAGCGCCACCGCCGGGACCACCCGTTCCTTCGAGAAGCTATCTGCCCCATGGATGATAGGCCGGGGACACGTGGCGCTCCCCCCGTCGCCGGGGCGTTATCCCGCGGTCACGGTGGCCGCGGCGTCGCGTCGCACCGGCGAAGGTGGGAGGAGGCGGAGGAGAGCCAGGGGTGCTGATCAGGAGGATGGCCTCTCCCTCAGCTCCGAAATTGAGGCACCAAGTTCCACTCCCCCCGTTCGCACTACCGACAAGGAGAGCACGAAACCTGCATCAGAAACCGGAATCACAAAGAAAGGATCAGCCATTAGAAGAGTTACTTTGGTGGTCCTTGCTGCGGTTTTCTTTGGCGTTAGCATCGCCCTGAGGGATGGGGTTGGGAAGGCATCTGAATATTTTGCTGGATATTTATTGGAACAGAGTTTGTCAGTAGACAATCTCTTTGTTTTTGTTCTGGTCTTCAAGTATTTTAAAGTGCCACAGGAATACCAGAACCGGGTGCTCTCTTATGGTATTGCTGGAGCAGTGATCTTCCGCACGGTGATGATCACCCTAGGAGCAGCTACGATTCAGAGGTTTGAAGCAGTGAACCTATTATTGGCTTTGATCCTGCTATTCACTTCATATAAGTTATTTGCTGAAGAAGATGAAGAATCTGATCTATCTGACAATTTCATAGTGAAAACATGCCAAAGATTCATTCCTGTCACTGATTACTACGATGGTGATCGGTTTTTCACAACTCAAGAAGGTTTATGGAAAGCCACACCTTTGCTGTTGACTGTGGCAGTGATCGAACTAAGTGATATTGCTTTCGCTATTGACTCAATACCAGCAGTTTTTGGTGTCACAAGGGATCCACTTGTAGTGTTATCATCAAATATTTTTGCTATTTCTGGTTTGAGGTCACTCTACGTACTCATTTCTGAAAGCATGTCTGAATTGGACTATTTGCAGCCTGCAATTGGTATAGTTTTGGGCTTCATAGGGACAAAGATGGTCTTTGACTTTTTTGGTTATCATATACCAACTGAAGCTTCGCTTGCTATTGTTACCACGTGTCTAAGTGGTGGAGTAATATTGAGTCTTAGGAAAGCATCAACTGAAGAAAAGGACAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MASASTAVASATAGTTRSFEKLSAPWMIGRGHVALPPSPGRYPAVTVAAASRRTGEGGRRRRRARGADQEDGLSLSSEIEAPSSTPPVRTTDKESTKPASETGITKKGSAIRRVTLVVLAAVFFGVSIALRDGVGKASEYFAGYLLEQSLSVDNLFVFVLVFKYFKVPQEYQNRVLSYGIAGAVIFRTVMITLGAATIQRFEAVNLLLALILLFTSYKLFAEEDEESDLSDNFIVKTCQRFIPVTDYYDGDRFFTTQEGLWKATPLLLTVAVIELSDIAFAIDSIPAVFGVTRDPLVVLSSNIFAISGLRSLYVLISESMSELDYLQPAIGIVLGFIGTKMVFDFFGYHIPTEASLAIVTTCLSGGVILSLRKASTEEKDK</aaseq>

Gene Sequence

<dnaseqindica>1..232#508..626#704..780#1123..1210#1296..1376#1464..1520#2065..2146#2371..2420#2718..2774#2864..2942#3617..3675#3942..3999#4123..4229#ATGGCCTCCGCCTCCACCGCCGTGGCCAGCGCCACCGCCGGGACCACCCGTTCCTTCGAGAAGCTATCTGCCCCATGGATGATAGGCCGGGGACACGTGGCGCTCCCCCCGTCGCCGGGGCGTTATCCCGCGGTCACGGTGGCCGCGGCGTCGCGTCGCACCGGCGAAGGTGGGAGGAGGCGGAGGAGAGCCAGGGGTGCTGATCAGGAGGATGGCCTCTCCCTCAGCTCCGGTGAGTTGCGTCGTCCTCACCGTCTCCCACTCTCCAGCCTCTCCTACCTGACTAGCTAGCTCCATGTATCCGTGCTAATTAAGTATAGTACCAATTAACCTTCTAGTTGAAACCTTGAGCTTGGAATTGTTCGACGACTCATAGAGAGTCAAAGGTGTGATTAGATGATTTCTAATCATAAAACGCGCAACGATTTTGTTTATACCTCACCGAGCATATATTTATCTGTGGTGAAATTAAGTTTTCTGGTTCCCCTTATGTATAACTGTGAGCAGAAATTGAGGCACCAAGTTCCACTCCCCCCGTTCGCACTACCGACAAGGAGAGCACGAAACCTGCATCAGAAACCGGAATCACAAAGAAAGGATCAGCCATTAGAAGAGTTACTTTGGTGGTTAGTGTTTGACGATATAACGCTTCATCAGTTGATTTTCAGTGCTGCGCTTGATTCAGTAAATTGACCTTTTGCAGGTCCTTGCTGCGGTTTTCTTTGGCGTTAGCATCGCCCTGAGGGATGGGGTTGGGAAGGCATCTGAATATTTTGCTGGGTATGTGTTATGCGTCACAACTGAATTTTTATACTGAAAAATGTTTTATGGAACTGTCAGCATTTACCCATCCACCAGAACAATTGTAGGATTCCCGCCGGCACTATTATGTTAGCAAAGCCATCTAGGAAAAGAGTTGGTGAAAATTAAAAATGTATGGGCTCATTCATTGGTTTGTGCAAGTTAGTTTGCCCAGTTGTGATTTTGAACGTCTCTTACTTGCTTATTTACAAATAGTTAAATGATTATTTCTGAATTTAACTATGCTTCTTCTTTTTGTCCTCATCTCCTGTCTTTTAAATTTTATGTGTAACAATTTGATATGTTTCTGTTGTATAACAGATATTTATTGGAACAGAGTTTGTCAGTAGACAATCTCTTTGTTTTTGTTCTGGTCTTCAAGTATTTTAAAGTGCCACAGGAATACCAGGTATGATTTAGTAGTTAGTTTGGTAGATAATGCCCATGTCTATTTCATCCTTTTCTTCTCACATTTTTGTGGTATTCAAAACAAGAACCGGGTGCTCTCTTATGGTATTGCTGGAGCAGTGATCTTCCGCACGGTGATGATCACCCTAGGAGCAGCTACGATTCAGGTTGTTTTTTTCTCACATGTTAACATCACTTATCTTCTTAGTTCTATGATCTTGCAGTAATTCTTCTTAACTTCTCTTTTCCTGTAGAGGTTTGAAGCAGTGAACCTATTATTGGCTTTGATCCTGCTATTCACTTCATATAAGGTGGATCGATCAATGCTTCTTTTCTTCTATTCTCCTTTTGGTGTACTAAGTTACTTTACCATGTTTGAAATGGACATATATGATGCTATTATTGCTCACCCAATACTTCCTTTTATGAGAATGACAAGTTCTCACTGTCATTTTACAAAAATCTACCTGTTTTATTTCCTGTGAAATTTCAGTCCCATCACTGTCTCTAACAACAATATACTCTAATACTCAACCAATCCTGGACTCCAGGTGCATGTATTACATTATTAAAAAAGTATTTGGCATATACCTTCCATCAGTCAATGGCTAACAGCATGATGACTTGCATCTTTTGGGGATTCTTGTTTGTTCCAGCTATCTTGTTATAGTTCAACCTAGTCCTTCCATCATTTAGTGAGCACTAAGTTGTCACACTTCAAAAATATTATGTTTTGCTTAATTGTAATGAATGACACCTCAACATGTTAGGCAAAGCTTCTTTCGAGTAACTTCAAGTGCATTAAATATAAGTGATGTTTACGGATGCTAATATTCATTCTTAACATGATGGCAGTTATTTGCTGAAGAAGATGAAGAATCTGATCTATCTGACAATTTCATAGTGAAAACATGCCAAAGATTCATTCCTGTCACTGGTAATTAACTTCATTCGATGATTTTCAGTTTCTCTTATGACATTACATTTATATTATTTGGAACGAAACCAATCTCCACTGTGAGCTCCAGATCATAGCCATACTGACCAGATACTCACTGAAATTTTTTCCACTTCCTTCACAAGTGAACTTCTTATGAGTAGAAGTTAATATACACTCGCTTGCAGTTGCGGTTAAACTCACTCTTATGTTTCTTTTGTCAGATTACTACGATGGTGATCGGTTTTTCACAACTCAAGAAGGTTTATGGAAAGTAAGTGTCTGACTGTTGTCCAGTATAAGCTGGATCATTATCACAAGTTCACAGCAGCTTGTACACGCTTGTTAGTACTAGACATGATTGCCTTCTTAGTATTAGAAAACTGACCTGTCTACATATTAAAGAATCTGAAGTATATCTATTTGTCAGTACCCTTACAACTTCTGCTTGTGCAGAAAAGATTCTAACTACAATATAGATGAAATTGGGTTGACCATTCAATACAATAATCTGACATCAAGAGCTACCTTTTCCTGAAGATACATTTTCTTTTGTTGTTAATATCTGCAGGCCACACCTTTGCTGTTGACTGTGGCAGTGATCGAACTAAGTGATATTGCTTTCGCTGTAGGTTCCTTTGCAATCTTTTTCCTGTGCAAAGTTTCATTTTCTATTTTATGATCACATGAATGGGGATTGACATTTCTGATTTATAGATTGACTCAATACCAGCAGTTTTTGGTGTCACAAGGGATCCACTTGTAGTGTTATCATCAAATATTTTTGCTATTTCTGGTAATCCTTCTTTCTTTTGTGTTTATGAACACATCTTACAACAATCCTTTCTTTTTATTCATAGCACATATCAGCACTTACCAATGTAAGAAATTTTACAAGAGAACTTTTACCACTAGCTAGGAACTTCCCGTGAGCTTGCTATTTATCAATGAATATTTCTGCAGCCTTTACTTTTGTTAGCACCTGCAGCCTGCATTCATTCAGCCAGTTGATGCTCAGAGTTAGTTTTCACAATTTTGCAGTTATCTGTTCTATAAAAGTACTGTTTCTTGCTGTAGGTATTTGGGCTGCATTCAGCTTGATTGTTTCATATAAAATTTAAATATACTAGTTATATATCTGGATATTACAGACGATGGTCTAATGTGGCACACATGACCCTATTATGTCCTCTTGATAACGCCAACTCTAGGTTTCTAGCAATCTTTGATGTTTATACCTCAGTTTGCAGACAAGTGATTGATTTGGTAATTGAGTAACTTCTAATGATGTAATTGGGTAAATGATAAATTGATAATAACATACATCATAGTTACATACTGAAAGTTGAATGAAGCATGAAAGAAAACATTAGATATCAGCTAGTTTTGATGCTATATATTTTATATGTCACACATTTTATGCACTCTTCACACATTGTTAAGCGCTTACCTTGAAAAATTACTCTATAGGTTTGAGGTCACTCTACGTACTCATTTCTGAAAGCATGTCTGAATTGGACTATTTGCAGGTACAAATCCACTTGCTCTTTTAAATATAGTAGAGTTATTTACCTATTTATTAATACTGTGGTGTACCTAATACTTATCAATTCCTTTAGCTATTTCATAGTTATACTTAATAAACAACTTGGCATTCATCACTATTGATATTCGTTGTATAGCAGTGATTACTAGCAGGTGTTACTGAACCCCATGGACATTAGCATATATCCATATATTTCTCAATTATCTACTTCTTGTTCCTCTTATTGCTATTGGCATTTTTTTTTTGCAGCCTGCAATTGGTATAGTTTTGGGCTTCATAGGGACAAAGATGGTCTTTGACTTTTTTGGTGAGCAACTAGAAACCACATTAGTGCACGCAATTGTCAATACTTTCTTATATACATTGCGGTTCAAGCTATGTTTTGGTTTCTCCATTAGCAACACCAGATGACAATGTTGATCTGTGGCAGGTTATCATATACCAACTGAAGCTTCGCTTGCTATTGTTACCACGTGTCTAAGTGGTGGAGTAATATTGAGTCTTAGGAAAGCATCAACTGAAGAAAAGGACAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018913

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018913&oldid=47669"