BGIOSGA018932

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Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018932| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018932, complete gene.| tag = OJ1654_...")
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Gene Name

BGIOSGA018932

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018932, complete gene.

LocusTag

OJ1654_B10.16

Ensembl Transcript ID

BGIOSGA018932-TA

Ensembl Protein ID

BGIOSGA018932-PA

Length

5512

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:911308..916819

Sequence Coding Region

916478..916819,916288..916374),complement(915561..915596,915161..915272),complement(915003..915073
,914774..914904),complement(914632..914648,914362..914410),complement(913832..913932
,913169..913228),complement(912316..912349,912130..912228),complement(911968..912027
,911603..911853),complement(911308..911483

Genome Context

<gbrowseImage1> name=IndicaChromosome05:911308..916819 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:911308..916819 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCGCCTCCGCCGCCGCAGCGCGGCGCCACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGCCCGTCTACCTATGGCCGCTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCGACCCTGACCTCGCGCTCGACGGCCAGGGCCCCGGCGGCGCCGCCGCGGCGGTGGCCGAGGCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGCTATGCTAGGAAAAGAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCTGATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAA</cdnaseq>

Protein Sequence

<aaseq>MPPKLLTYLILALLAASAAAARRHPSPASSAAAGEPVYLWPLPRNFTSGSRTLLVDPDLALDGQGPGGAAAAVAEAFERYRSLVFSPWAHAARNASGGYDVGKLTVVVASADEKLELGVDESYTIYVAAAGGVNSIVGGATIEANTIYGAIRGLETFSQLCVFNYDTKNVEVRHAPWYIEDEPRFAFRGLLLDTSRHFLPVDVIKQVIDSMSFSKLNVLHWHIIDEQSFPLEVPSYPKLWKGSYSKLERYTVEDARDIVSYARKRGIHVMAEIDVPGHAESWGKGYPKLWPSPKCREPLDVTSNFTFEVISGILSDMRKIFPFGLFHLGGDEVYTGCWNATPHVKQWLHERNMTTKDAYKYFVLKAQEIAINLNWIPVNWEETFNSFKENLNPLTVVHNWLGPGVCPKVVEKGFRCIMSNQGVWYLDHLDVPWQDFYTSEPLAGINNTAQQKLVLGGEVCMWGETADTSDVQQTIWPRAAAAAERMWSQLEAISAQDLETTVLARLHYFRCLLNHRGIAAAPVTNSYARRPPIGPGSCFIQ</aaseq>

Gene Sequence

<dnaseqindica>1..342#446..532#1224..1259#1548..1659#1747..1817#1916..2046#2172..2188#2410..2458#2888..2988#3592..3651#4471..4504#4592..4690#4793..4852#4967..5217#5337..5512#ATGCCCCCCAAACTCCTCACTTATCTCATCCTAGCCCTCCTCGCCGCCTCCGCCGCCGCAGCGCGGCGCCACCCGTCTCCGGCGAGCTCAGCCGCCGCCGGGGAGCCCGTCTACCTATGGCCGCTGCCGAGGAACTTCACCTCGGGTTCCCGGACCCTGCTGGTCGACCCTGACCTCGCGCTCGACGGCCAGGGCCCCGGCGGCGCCGCCGCGGCGGTGGCCGAGGCGTTCGAGAGGTACAGATCGCTCGTCTTCTCTCCATGGGCGCACGCCGCGCGCAACGCCTCGGGTGGGTACGACGTCGGGAAGCTCACCGTCGTCGTCGCCTCCGCCGATGAGAAGGTACCGTGTGTGTGTGTTCGAGCTGCTCCCGAGTTTGGCTCGACGGTTGCTTCGTCTGGATCAGCACGCACACTGTGAATTTCTCCGTGTTTTTGTGATGTAGCTGGAGCTTGGAGTGGACGAGAGCTACACGATCTATGTCGCGGCGGCGGGCGGCGTCAATTCGATCGTGGGTGGAGCAACCATAGAGGTGATTTCATTTCCTCTTCTCCAGATTATGCCCTTTTTTTTACAGTAGTGTTGTGTTGGTGAAGTGTTTTGGGAGAATTTGACGTGAGGGCTACTACTTCTCCCTTTTTGAAGTACGGTTTAACTCCTAGCGTAGTTATGGAGCAAGTAGAGTGAGCTGAGTGAGTGGTAAAAAGAAGACTTCAATGTGGAATTACTGCAAATATTGATGAACTGGTTTCCAGTGAAATTCAGCTTATAACGGTATAGCATAGCTAAGGCTGAACTTCTCTAATGCAATGAACTTGATTTTTTTTAATGAGCTAGCTATTTGATTTTTGCGCACTTCTCAGTAGATGCATCAACTCTTGTGGTATTCTTGGAAACTCTGATATGAAATGCTCATATTATTGTGGGTTTTATCAAACGAAACTAACGGTTGGTACTGTTTGTGGAGTATGTTGATTGATACGAACATCATCTCTGAATATTTTAGAGTTCTACTGCCAGGCTTGGGGTCTTGGGGCCTTGGGGGCATGGGTTCAACTAAAGTAGCCCTCACTCATATACAGTTTAGCTTTGCCGGTTGTGCCCCCTGCAAACTTTCAGAGAACTGAAGACAAACGTTGCTATTAAGTTATAATATTGTCCAACATTTCTCTTTTATGCACAAGTGTATGAAAACTGAAGCTGTATTTTATCTATCCTTGTAGGCTAACACCATATATGGAGCTATTCGTGGATTAGAGGTATGAACTTTATTTATGAGGAACTCCCTTTTCAATTTTTGTATGTTTTCCACCTGCTGATTGTTGTGTTGTGTTTCGAGGAAGTAATTATTGACTATACTCTAAGGTTCTGGAGAATTAGAACTCAATTGATGATACATTTTATATATCCAGTGATCAACTGGTGTATGTTAGTCCAGTAATTAATTACTGTTTAAACAGTTTCATGTTCCCTTTTACCTTTTTCTGCTTTCCTGAAAAAAAAAAGAAACATTTTCTCCCCTTATTGTAATGGTTGGCACATGGCAGACATTCAGTCAATTGTGTGTTTTCAACTACGATACCAAAAATGTCGAAGTGCGTCATGCCCCATGGTACATTGAAGACGAACCACGCTTTGCTTTTCGTGGGTTGCTCCTTGGTAAGAAATACAATCTTAAATGTTCCTGATATGACTGGTTAGCCACAACAGAAAGAATATTTATTTTCCCTGTCACATCTATTGCAGACACATCAAGGCATTTCCTCCCAGTAGATGTGATTAAACAAGTGATTGACTCCATGTCATTTTCTAAGCTGGTAATATATTATCTTCTGTATCGTGTTAGTTGTTTTTACCAGAATAACCTTTCCCTATTCCCTTGCTATATACTGAGACCTAGAGTTGTGTCCAGTAGAATGTTCTTCATTGGCATATCATCGACGAGCAATCTTTTCCATTAGAAGTACCATCATATCCAAAACTATGGAAGGGTTCATATTCAAAATTGGAGCGCTACACTGTGGAAGATGCACGTGATATTGTCAGGTATCAAGTTTATCATTTGCCTTTCGCATTCTCTGTATCTTCTTTATATTCTATTGCCAAGTTCTTTCAGTTCACTTATAAAAGGTGTTCTCTGATTTCACGTCTGAAACTTCCCGACTCTAAAGCTATGCTAGGAAAAGAGGTATGCTTATTTCCAATTACATATATTTTCTTTCATCTAGCTGGGTGTAGTATCGTTCTATTTTAGTTGGAAGTTTGGGACTCTCAGCCGCAGGGGATTGTATGATACTCATGCAATTACATGTTTATTGAACTCTTCGTCACAGTTTCCCTAGTTGTTGTTTGTCTAGAATGTTATTGCTCTACAAGGAATGTGTTCTGATTATTATTTACATCTGTTAGGTATCCATGTCATGGCTGAAATTGACGTGCCTGGCCATGCAGAATCATGGTGAGTTTGCACGTACAATTTCCTATTCTGTTAGATTTCTGCTTGTGCATCAGTGAGGTTTGTCCCAGTTGCTTTTCACGTGCAACAGAATTATCTTATGTGCAAATCAACAAATAATCACATGCTGTTTCTTTGTGTCGCTTAGAGTTGCAATATTATGTGATTAATCCAAGCTCTTAGCTCTAGCATTTCAGCCGTTATGTTACAGTAATTCAAGTGTCACTACGTTCCATTTGATCCAGTGATTTAATTGAGTACATTGTATATTTGTGTACATAACTAAGCAACTGGGATTCAGTTACTACCTTATATGCTGTAGCAAGCATTTCAGATTTGGTTTTGCCCTGTTGTTTTGCTCTGTTGTGCTTATTATATGAAGTTGACTTGTTATCTACTCAGAGATACTTATGCAAATATTAATTTCTGCAGGGGAAAGGGATATCCAAAGCTCTGGCCTTCTCCTAAGTGCAGAGAACCGTTAGATGTTACTAGCAATTTCACATTTGAAGTTATTTCTGGAATTTTGTCTGGTTAGTTCCTCTTTCCTTCTTAAGAAAAAACTGGCTCAATTTAGGGATTGGTTGTTACTCAGAGACACATGCCTTCATATTTTCATTTATAGTCAAACTCAAATATTTTTTGTTTTCATGGAGAGTGGATGCAAAATCACTATAGTAATGAATTGTGACATGTGAAATAGGTAAGGCAGTATCAAAATGGGTGTACTTACCCCTTAGTGCTTTATCTAGTAGCGCTGCACCAAAATGGACTGATCAATTCAAATTTTGGCCATGTTTGATTACTCATCACTGTAAACTCAAAACACAAAGGGATTCACATGATTAGTCCTTCTGCAGGACAGCCAGTAATTCTATATTCCTATATTAGGTTCAGCATTTTTTCAGTCACTTTAGCATGCAACTGTTTGACAACTGGGTGTCTGAATCACTACAGCAGAGCAAGATGTGCAAAATTATTAGCCAGAGTAGGACCATCCTTCTGTACATTATCTTCCCACTAAATATTCATTATAATGTTACATGATAAGCAGCGAGCCAACGACAGAGAGTGCAAGTTATACAGCATTCTGTCTTTCCTGCAATTTAACCAAATCAACTTCTTGCCCTTTTCAGATATGAGAAAAATCTTTCCATTTGGGCTCTTCCACTTGGGTGGTGATGAAGTATATACAGGTTAGCCTGCTTCTCTTGTTTAATAGGAGGCACTTCATTAATAAGAGTGTAAGATGCTGGGATGTTGCAAACTTTTGGATTTGAGTGTGAGCCAACTATCTTCCATTAAACTGATATGTTAGAAGCTAGATCTTTTATTTCTAGGAAGAAAATCTTGTCTCTAATACTCCCTCCAGTCAAATATATTTGATGTTGGGACTTGGGAGAGCTAAGTCAAATGTATTTGACATTGGGTGAGCTAAACTTAGGTCTCCCAACATCAGATATATTTGACTTGAGTGAGTAATACTTTTGCCAAACAAGGCTTGCTGTGTTGTAAGTTACAACTACAATTTATGTCCGCTTTCCTTTAATGTTAGTTTAAACTGTAAGCTATATATTATTATCCAGAATATTTATTCGTAATCCGTGCCTACTTCATACCAAATCCAGTAGAGTATCTTGTAACCGATAAATACATTATGTTCATTGATGTGACTGGTGACATCTCTTCTGTTTGTTAGACTGAGGCTGTGTTTAGTTCACACCAAAATTGGAAGTTTGGTTATAATTGAAATGATGTGATGGAAAAGTTGGAAGTTTGTGTGTGTAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAACTATTTTGGAACTAAACACGGCATGAACATTGTTGTAATTTGTTTTCCATGTATCAGTTCAGAGCAATAACGGTTGATACATTATCATGCTAAAAATAGATGCTGATATATAATTACTATCTATGTCATGGAGCTCTTCTTTTTTCTTGTGAATTTCTTTCCAACTTCATTCTCTTTCCCACCTCAGGTTGCTGGAATGCAACACCCCATGTGAAACAGTGGTATGTGCTCTAGTTTTTGTAAATGGTTGGTCAATCTTCTGCTAGATGTTCCTTTCCTTTCACTGCTTAACAGCACCTATTTTCCAGGCTTCATGAACGCAACATGACTACAAAAGATGCTTACAAATACTTCGTCCTGAAGGCTCAAGAGATAGCAATTAACCTTAATTGGATTCCAGTAAATTGGTTCGCTCTCTGCTTGCTAACTTTTGCTTAGGACTTCAAATGAAAAAAAAGGACATGAGGTTTACTTTTTATTTGTGGCATGCTACCCTCTTTATCTTGCAGGGAAGAAACCTTCAACTCATTCAAAGAAAATCTCAATCCTCTAACCGTGGTGCATAACTGGTAATTCATTAGTTTGTGTTCAGCAACTGAATCAGTTTCTTTCAGTTCTTGATAACCATACCTTCCATGCTAATGAACATCCATCACACACCTTGAATGTACACTTTATTGCAGGCTGGGTCCTGGAGTCTGCCCTAAAGTTGTTGAAAAGGGTTTCAGATGTATAATGAGTAACCAAGGTGTATGGTACCTTGATCATCTTGATGTTCCCTGGCAAGATTTCTACACTAGTGAGCCACTCGCTGGAATTAATAACACAGCACAGCAAAAGCTTGTACTTGGTGGAGAGGTTTGCATGTGGGGTGAGACAGCAGACACCTCTGATGTTCAGCAAACGATATGGCCACGAGCAGCTGCAGCAGCAGGTATGAACTGTACAAATTTTGGAAGCTTGCGCTGTATTTAAATCTCTCCATCCTTCCCTTTCTTCTTTTATGCCTATTGTTTTCGTGTGGCCTTATATGCCTTTATTGAATTACCATAGAGCGTATGTGGAGTCAGTTAGAGGCCATATCTGCCCAAGACCTGGAAACAACCGTCTTGGCTCGGTTACACTATTTCAGATGCCTGCTGAATCACCGTGGAATCGCTGCAGCTCCAGTCACAAACTCTTATGCTCGGCGTCCCCCAATTGGTCCTGGTTCATGCTTCATTCAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018932