BGIOSGA018938

From RiceWiki
Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018938| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018938, complete gene.| tag = OSJNBB0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018938

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018938, complete gene.

LocusTag

OSJNBB0041A22.11

Ensembl Transcript ID

BGIOSGA018938-TA

Ensembl Protein ID

BGIOSGA018938-PA

Length

1791

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:766477..768267

Sequence Coding Region

768132..768267,768018..768046),complement(767715..767780,767500..767607),complement(767187..767252
,766977..767097),complement(766617..766698,766477..766519

Genome Context

<gbrowseImage1> name=IndicaChromosome05:766477..768267 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:766477..768267 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCCCGCTGTTGAAGCCGTGGAGAAGAAGACAGGCTCAGCCCCCGTCAAGGCCCCTGCTCTGAATGAAAGGATACTGTCATCTATGTCCCGGAGATCTATTGCAGCACATCCATGGCATGATCTTGAGATTGGACCTGGTGCACCAACTATATTCAACTGCGTCATTGAGATTCCTAGGGGCAGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAGTGGTGGACCGTGTGCTCTATTCATCAGTTGTGTACCCTCACAACTATGGATTCATTCCTCGCACGCTGTGTGAAGACAGTGATCCGTTGGATGTGCTGGTTATAATGCAGGAGCCCGTTATACCAGGATGCTTCCTACGAGCAAAGGCCATTGGTCTCATGCCTATGATTGACCAGGGAGAGGCAGATGACAAGATTATTGCCGTTTGTGCTGATGATCCTGAGTACAAGCATTACAATGATATCAAGGAGCTCCCACCTCACCGCTTGGCTGAAATCAGGCGCTTTTTTGAGGACTACAAGAAGAATGAGAACAAGGAGGTTGCTGTCAATGACTTCCTGCCTGCAAGTGCTGCTTATGAGGCCATAAAGCACTCCATGGATCTCTATGCTACTTACATCGTGGAGGGCTTGAGGAGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAPAVEAVEKKTGSAPVKAPALNERILSSMSRRSIAAHPWHDLEIGPGAPTIFNCVIEIPRGSKVKYELDKKTGLIVVDRVLYSSVVYPHNYGFIPRTLCEDSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMIDQGEADDKIIAVCADDPEYKHYNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPASAAYEAIKHSMDLYATYIVEGLRR</aaseq>

Gene Sequence

<dnaseqindica>1..136#222..250#488..553#661..768#1016..1081#1171..1291#1570..1651#1749..1791#ATGGCTCCCGCTGTTGAAGCCGTGGAGAAGAAGACAGGCTCAGCCCCCGTCAAGGCCCCTGCTCTGAATGAAAGGATACTGTCATCTATGTCCCGGAGATCTATTGCAGCACATCCATGGCATGATCTTGAGATTGGTACATGACATTTCATCTTGACAAACCATCAATTTTCTATATTTCTCTCATAACTTACTTATAGGTTCCTGACTTCTTCCTGCAGGACCTGGTGCACCAACTATATTCAACTGCGTAAGGCCACCATAACAGATTCACATTTGTTTTTTCTCCCAGATTTAGTTTGATACATGTTCTTATTGGAAACTTATGTCAATAGCATAGCCCTTTTGAAGCGCCTCTCATTTTGAACTTTTAGAGTTAATGTGCTGGCTGGTATTTCACATTACACCAAGAATTTCTCGACCAAAAGAAAAAAGAAAAGAGAGGAAAAACTCTAACAAAGTGTGTCTCTTTTCTGTCACTTGTCAGGTCATTGAGATTCCTAGGGGCAGCAAGGTTAAATATGAACTTGACAAGAAAACTGGACTGATAGTGGTAAAACAAGGCGATTCAATTGATTCATCATTTTTTTTAGTGAAACCATATTTTTCCAGTGACTCTAAAATGTTTTGTACATCATTTGGTTGTATGCACATGTAAAGGTGGACCGTGTGCTCTATTCATCAGTTGTGTACCCTCACAACTATGGATTCATTCCTCGCACGCTGTGTGAAGACAGTGATCCGTTGGATGTGCTGGTTATAATGCAGGTATGTCTTTGTATTTTAGTTGGTACTAGAATCCTATTGCTTGTACTCTTAAGAAAAACAGTGCACAAGTTTCTTTTCCCTTCAGCCATTATGTAAATTCTGGTTTACTTTTCTTGATATAGCCATGTGAAATCATGGGCTTTGGCTTACCTCTTGTCCAATAATAGTATCATTCTATTAGGTTATATTCACATCTCACTCCTTTTGTTTGGGGAACCATATTAAATTCTAATTTTTGTTCAAACAGGAGCCCGTTATACCAGGATGCTTCCTACGAGCAAAGGCCATTGGTCTCATGCCTATGATTGACCAGGTTTGGTTTCATTCCAACATTTACAAAGTCCAGCGAAATGCTATTCTGATCCCCATGTTTCTATTCTGACCCCATGTTTGTTTGAACAGGGAGAGGCAGATGACAAGATTATTGCCGTTTGTGCTGATGATCCTGAGTACAAGCATTACAATGATATCAAGGAGCTCCCACCTCACCGCTTGGCTGAAATCAGGCGCTTTTTTGAGGACTGTATCCTTTTTTATCAACTTAATATCAAGTTCTGCATTCTAAATGAATTCTAGGCAATAACTCATGTCCTAACCTTGAACTCCACCAATATGTTGTTCCCATATGTGCATTTTCTGAAAGCCATTTGGCACTATTTTATATCTCAACTGTCTTGTATCATATGCACACATGGTCAACCACACACCAACTTAAATACTCTTGGGAGTCCCAGGATCATGCTAATTTCAAAACACTTGTCACCTCTTAGACCGAATGGTTTCTTTAACCGAGACATTCAGACAAGAAGAATGAGAACAAGGAGGTTGCTGTCAATGACTTCCTGCCTGCAAGTGCTGCTTATGAGGCCATAAAGCACTCCATGTGAGTACTTCACTTGCATAAGTACTACAACATACTGTACATGTTTGTGTAAAATCACATCAAGCTGACTCTTAACCATGTTGATGTTGCCATTCAGGGATCTCTATGCTACTTACATCGTGGAGGGCTTGAGGAGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018938