BGIOSGA018949

From RiceWiki
Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018949| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018949, complete gene.| tag = P0016H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018949

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018949, complete gene.

LocusTag

P0016H04.7

Ensembl Transcript ID

BGIOSGA018949-TA

Ensembl Protein ID

BGIOSGA018949-PA

Length

5527

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:574276..579802

Sequence Coding Region

579691..579802,578823..578969),complement(578543..578656,578209..578298),complement(577984..578112
,577258..577484),complement(575530..575778,575327..575430),complement(574415..574544
,574276..574314

Genome Context

<gbrowseImage1> name=IndicaChromosome05:574276..579802 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:574276..579802 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGCAGCTGGCGGCGTACCAGCGCGGGATGGCCGTCGAAAGGGAGCGCCAAGCCTCCACCTCCGCCAACTACCGCGCCGCGCTTCTCTCCTCCCGCTCCATCGCCCTTAAGGCCGGCAAGGAGTCAAAGTACCAACTTACCAAAGAGACGATTTCAAGCACTGCGGCTATAAATGAGAAGCTTGAGGGCATGGTTACAGATCAGCGGAACAAGAGAGATCACCATGCTGCAGTCATATCGAATCACCTCGAGGCTGTTGAAGCTCTTGAAGCAAAGTTTATTGAGGATGAAACACGGATGAAGAAAATAGAAGAAGCTGTAATCTGGTATAGCAAGTTCCTTGGTTTCCAGGTTGTTGGAGGAGAAGGTGTAAAGTTCATCTTCAACAAAATAGACTTGCAAAGCCCTGATAAGGAGTACTCGGTTACCTTAAAGCTTGCCAAAGATCGATATAACTTACTTCAGTGTGATCCAAGTATAAAAGATTCTGAAGAGTTGATGAAGGATTTGAACCTCACTAACGATCTGTTCAAGTTTGTAAGAATCGTCAGAGAAAGGTTCCAGGCTGAGGCTGCTACTGTGAATGGAGGTCTTCTCATGAGTTCAGTTGTTTGTCCAGATGCTTCCTCTATACCAGTTTCACCTCCAATGTTAATGCCACTTGACTCTAGAACTGAAAATGTTCTTGATAAGAGTCTTTCTCAGAGTAAGAACAAGGGGCGGAATCTACCTTCTAAAAGAGGAGCTGCTGCCCTATCAGCAGCATCTCCTGGTTCTGCGTTATCTATTGTGCGGCGCTCCCCACGTTTTGTGGGACGTAAATGCAATATCCAAACTTTCCAAGGAGGCATCTGCAAAATCGCCACCAACCAAACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCAGAACGGCGGCGCCGGACACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTCGGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACTGGGCTCGTTTACTGGTACTATGCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MAAQLAAYQRGMAVERERQASTSANYRAALLSSRSIALKAGKESKYQLTKETISSTAAINEKLEGMVTDQRNKRDHHAAVISNHLEAVEALEAKFIEDETRMKKIEEAVIWYSKFLGFQVVGGEGVKFIFNKIDLQSPDKEYSVTLKLAKDRYNLLQCDPSIKDSEELMKDLNLTNDLFKFVRIVRERFQAEAATVNGGLLMSSVVCPDASSIPVSPPMLMPLDSRTENVLDKSLSQSKNKGRNLPSKRGAAALSAASPGSALSIVRRSPRFVGRKCNIQTFQGGICKIATNQTSSIHRLVDCSLAIPSPPPPPPPPSEMRKTKPSKQSRAQAQQNGGAGHSKLARYFDPEASWDKDQLLDAVHWIRQVLGLACGLLWGAVPLVGAIWIALFVTISTGLVYWYYAYLLKIDEEDFGGHGALLQEGMFASFTLFLLSWTLIYSLVHF</aaseq>

Gene Sequence

<dnaseqindica>1..112#834..980#1147..1260#1505..1594#1691..1819#2319..2545#4025..4273#4373..4476#5259..5388#5489..5527#ATGGCGGCGCAGCTGGCGGCGTACCAGCGCGGGATGGCCGTCGAAAGGGAGCGCCAAGCCTCCACCTCCGCCAACTACCGCGCCGCGCTTCTCTCCTCCCGCTCCATCGCCCGTCAAACCATCTCCCGCCAAGGCAACGCCCTCCCCTAATCCCTCCCCCCACCCCCTCAATCTCTCTCGTTTCAATAAACACCCCCCATTTTTTTTTGTGCGAAATGAACTTTGGACGCGTGTCTGATGTATCTTCGATTTTATTTTATTTGGAAAATGTGGTTGGTACTTGGTACTGAATGTGAATTGAATTTGAGTGAATTGAAGTAACTCTACCCGGTTTCCCCTCCGATGAGTGCTGAAATTTTTGTGTTAAATATTGCTGAATTTCAGCTAGCAATACATTCCGATGAGTTTCCTAATAGGACTTTGTATTACAGGATTATCGTTTTCTCTTATAGTTTCCTAGTAGGACTTCTAATCTTTTATCTGTTAGGGCTCCTACATTTCTCCTTTATATATCCCTTGTAAGCCATATGGGAAGGGGTTGTCTGCCTTGTTATCCCCTGCGTTTTTAGCACCTCAATAGTGATCATTGATCATTGCCAGTCGGTGTCCATGGTCTTTTTCCTGTAAGGGTGTTCGACGATAAAATTTGTGTTTCTGTTGTGCATTTATTTTCATAACATTTTGGATGGTGCAGAGGAACTGAGTGGACTCAACCTTCAGTTGCGGAATTTGGAAGATGGTCTTGCAGAAGCATTGTCTGGTAAATTAAACTGCACTTCGCTGCCAAATGGTTCATGGTATGCCTGAAATCTTGGTGTAAACTGTATTTACAGTTAAGGCCGGCAAGGAGTCAAAGTACCAACTTACCAAAGAGACGATTTCAAGCACTGCGGCTATAAATGAGAAGCTTGAGGGCATGGTTACAGATCAGCGGAACAAGAGAGATCACCATGCTGCAGTCATATCGAATCACCTCGAGGGTAACTTACCTATCATTTTAGGGCTATGTTTTGGGTTTTTTTTTTGTTGCTGTGGCTTATTTAAGGTTTTTCAAAACATTATATTGCTAGTCTTAGAAAATGTCTTTCTTGAACTGTGCACATATAGTGTTCATACGATAGTGATATACTTCATGTACTGTGGCAGCTGTTGAAGCTCTTGAAGCAAAGTTTATTGAGGATGAAACACGGATGAAGAAAATAGAAGAAGCTGTAATCTGGTATAGCAAGTTCCTTGGTTTCCAGGTTGTTGGAGGAGAAGGTGAGTGATGAATCAGCTCAATGTTCAAGTAAATTATGGGATAAATTCCTTATGCCTTTTAAATTTCATCTTATCCTTTATATGCCACTTATCAGCTCACTGACTCGTGGGTTTAAAGCCCACATGTCATTGGGACAACAGTGGCACATAGGGGATGAAGTAAACTTTACTGAGGAATATAAGGAATCGCCCCTAAATTATGCCAATTCCATCTTTCATGGCATTTGCCCTGTTCTTCCTCAAGGTGTAAAGTTCATCTTCAACAAAATAGACTTGCAAAGCCCTGATAAGGAGTACTCGGTTACCTTAAAGCTTGCCAAAGATCGATATAACTGTGAGTTGAAGTTCCTCATGAAACTTGGCCAAGTGTCTTGAATGCTTGATTTTTTGAGCTGTACTTGACATTATCTTTTTTTTTTCCTAACAACAGTACTTCAGTGTGATCCAAGTATAAAAGATTCTGAAGAGTTGATGAAGGATTTGAACCTCACTAACGATCTGTTCAAGTTTGTAAGAATCGTCAGAGAAAGGTTCCAGGCTGAGGCTGCTACTGTGAATGGTACTGAACATTAACTGTCAGTATGAATTGTCGTTGCAATGAACATGGTAGGGATTAGGGGATAGGGCCTTTAGTCCTAACTGAGGTGTCCTCAACCCAAGTGGCACAATAGCCTTTTTAAATATGCCATATCCTTAGCAGATTGATCTAATTACCAAACTACAGATATGCCATGATTGCCATCAAGTACTGGAACCACATAAATATGCTATGTAATTGATCTACTCCTAAGCATTACCCATAAGCTTCCCTGTTAGCACTTAACAGCCATCTCACGGAAAATTACGACTCTCCTCCAAGCCGCTGTGTACTCAGCTCCAGCTGCATTGCCGTGCAACTGGCCATAATGTGCACTGTAGACATGACTAGTTTTCTCTCCCTTCATGACTTCTCATCCTCCCTTTTCTCATAGTACCGATCCTTTGTTTGCTCCCATATTTATTCACACAGGCTTCCTTTTTTTTGGTTGTAATCTAACTCGTGCAACTGATTTCCGCAGGAGGTCTTCTCATGAGTTCAGTTGTTTGTCCAGATGCTTCCTCTATACCAGTTTCACCTCCAATGTTAATGCCACTTGACTCTAGAACTGAAAATGTTCTTGATAAGAGTCTTTCTCAGAGTAAGAACAAGGGGCGGAATCTACCTTCTAAAAGAGGAGCTGCTGCCCTATCAGCAGCATCTCCTGGTTCTGCGTTATCTATTGTGCGGCGCTCCCCACGTTTTGTGGTAACCATCTCTTCTCCTAAAATTTGTTTCCAGTTTCTGATTATATTTTGAGGAGCCAAAATAGCAGTGAGGCTCAAGTGTCAGTTTAGAATGTCCTACTCACTTCCCACAGATGTTATAGCTGAGTGGGAGAACCATTTTGATTATGCATATTCATGGAGGCAATATGCCCTTTTGCTTTGATGCACATTTGCTCTTTTGCACAAGTTGAGTTTTTAGTAGTAATAGCCTAATATGGCTTTGCTGGTTCCTTCCTAGGCTCTTGTAAACTTTGCATTCAGGCGATTCAAAACTTGGTACGAATGATCATTGAGGTCTACACCTTTTAGGCTAGTCAAGGATGGTTTTTACTACTGGGTTAGTACCCTGTCAGGAAGAATTGCAATCTGCAATCTTACATATGAATTCCTTAGATGAACAACTGTCACTGAATTTTGCACCATGCTTATTGGAAGTTCTTTTCGGGCCATTATCCTATCCATAACATTTCGAGCATTCCAAATTTATGTGCATGATGTATCATATTTCAAGGCAGACAACAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATCACAGTGAAAGGCGGATAATGAATCTTGACAATTTTCACATTGTTCCTGCAGGGAATCAGGTGAGTTGTCAGCTGAGGCAATTTGTTGTCACCTGAGCAGACTGGCTCTTTAACTGATCAAGCATTGTAGATCCAAGAAAGTAACTAAAGTAATATCTTCAAATAATTCATCAACTGTCAGGGAACTCATTGCCGGTTGTATGTATGATTCAAATTATCTTGTCAGATCTTGTACTTGATGGCGTTGTGTGTTAGTACTTCCCTTATCAAATGAATCGCTTGTTTAGCGAGCAGTGATCTCATGGTGTACTTCTATCCAATGTACTGTACTGTTATAGTGTTATTATGGGATTTTCTCTCTCTTTTTTTTTAAGAGGTGAACTGCTGTAATTTCGCCCACTGATTTTGTGAAAGATGTGTCCTCTCGGCTTGCTCTCCAATGATCCATAGTAGAAAATTCATTGAAACTCTGTAATTTTGTAATCTGGAATAATTCTCATGCTCGAAATTAGGCTTTGATAAAGAGCTTTTTATTTTTATTTCTAGCGTAAATTTCAGAAAACTACAACTTTAGTAACAAAACTACTTCGTATCAGTTTGCTACACATTAGTGACATACTTCAATTAGCTGCAACAATAGCGTGGGAAATTATCACAAAACTGTAACTTTTACGTTATATGCTGCTATAGTACATATAGGTGACAATATAATGTAAAAGTTACAGTTTTGTGATAATTTCCGACGCTATTGTTGCAGCAAACTGATAGTTTTGTCACTAAAGTTACAACTTTATAAAATTTACTTTTATTTTTCTATGTTTGCACGTAATGAGATGACATGTTAATGATGGACCAATCATTAGCCGATCATCACTAGTAGGGACGTAAATGCAATATCCAAACTTTCCAAGGAGGCATCTGCAAAATCGCCACCAACCAAACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGCCGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCAGAACGGCGGCGCCGGACACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGTATACTTCCTCCTCCTCCTTCTTGCCGCCATTAATGGCGGCCTCCGGATTCTCCTTGCCTGATGGATGCTTGCTTGGCTGGGCTCTCCTTTGCAACAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTCGGCGCCATCTGGATCGCACTGTGAGTTGCTCACGCCTCCAATCCCATCTCGCCCTATGCTGGATTCGTGGATTTGTAGTCAGATGTGTCTTGTTGAGTCTCTTCCTCACATTGAGGAGTTCAATTGTAGTGCAGATAGGGGATCAGATTTATCATATGTTAATAACTTTTCTGCTTTTTAGTTGGGAATTGGGATCTGCGCTACAGGAGGTCATTGTCTACAAAATCCACCTTTTGCTTTGGTGTGGATTTTGGTTGTTTTGACACCTGTAACTGCAAGATCTTAGCTCGATGATACGTGCACATCTGCTGCCCTAGATGCATTTAGGTTATCTTCGGTGAAGATTAACTGTGCGTTGAACCTTTAATTGCTGATAATTAGAAGACCCTGAAGCTATAAGCAAGCATGCGCAAACATCCATCTTGAATTTAGTATAATTAGTGTGTGAAACTGTGAATGCTACTAGGTTCTTTAGATTCATGTGGTGTATCACTTAAGATGAGCTTTTGGCAATACAATTTAATTTGGCCTGGAGTACATTGCAAGCATGATTATCGAACCTGTCGGTAGCTGAGTACCCTGAAAGTTTATGCAGAATTATCAGTAATTATTTCTGTTTATATGACACTAGTAAGCAATACCTTGCACAGAATTACTGTAATTATTGTTTCATTATTATACTTTCAGTAATTACTGTTTTCTTTCTTCTGTATGGCACAGTGAACTCTGTAAAGATCGTTAATTAATACCAGCATCTGAGCTTTTGATATGTTCCTCTTAACATGACATATATTGTACACAGGTTTGTGACTATTTCTACTGGGCTCGTTTACTGGTACTATGCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGGTAAAAAGAAAAACATAACCAATTTCTGTAACTACCCTGTTTCTGCAGACTTAATCCGTTTGTTTTGGTTCGAAACTGAATTTGCTTCTTTTTGCTGCAGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018949

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018949&oldid=47705"