BGIOSGA018956

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Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018956| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018956, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA018956

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018956, complete gene.

LocusTag

OSJNBA0068N01.11

Ensembl Transcript ID

BGIOSGA018956-TA

Ensembl Protein ID

BGIOSGA018956-PA

Length

2853

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:433118..435970

Sequence Coding Region

435942..435970,435739..435847),complement(435504..435647,435200..435304),complement(434763..434846
,434513..434628),complement(434318..434419,434116..434229),complement(433938..433994
,433758..433824),complement(433616..433669,433454..433528),complement(433318..433353
,433118..433231

Genome Context

<gbrowseImage1> name=IndicaChromosome05:433118..435970 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:433118..435970 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAAAACTTGCAGCTGTTGTTCGCAGTGTACTTAGATTAACAAATGAAAGCATGAGGATTGTTATGGTAACAATTATTGGAGTGCTCTTGGGCTTCTTCATTGGAATTTCATTCCCATCAGTCAGCATAACAAAGCTTCACTTTCCTTCTAGCTTTGTATCATACATAGAAGACAGAAACTCTGGGCTCACAACACAAGCTTTGCTTAATCACGCCTGGACTTCCGCCCGAAATGCAAGGGAAAACAGTTCTGAACCAAGTTCAAACACTACTTTGAAGATTTATGTCCCAACGAACCCCAAGGGTGCAGAGAGACTAGCGCCAGCTATTGTTGTGCCAGAAACTGACTTCCATTTGCGCAGGTTATGGGGAGAACCAAGTGAGGACCTGCCCTTCAAACCAAAGTACCTTGTTACTTTCACTGTTGGATATGCACAGAAAGAAAATATCAACAGAGCAGTGAAGAAGTTCTCTGACAATTTTGCTATTCTGTTGTTCCATTATGATGGTCGGGTGAGTGAGTGGGACGAGTTTGAGTGGTCGAAACGAGCCATCCATATAAGTGCCAGGAAACAAACTAAGTGGTGGTATGCCAAAAGATTCCTGCATCCTGATATTGTGGCAGCTTATGAGTACATATTCATCTGGGATGAGGACCTTGGGGTGGAGCATTTCAATGCGGAGGAATACATCAAACTTGTCAAGAAATACCATCTGGAGATCTCTCAACCTGGTTTAGAGCCTGATCGGGGATTGACATGGCAGATGACAAAAAGAAGAGGTGACCGCGAGGTCCACAAGGTTACAGAGGAGAGGCCGGGCTGGTGTTCTGACCCTCATCTTCCGCCTTGTGCTGCCTTTGTTGAAATAATGGCTCCAGTCTTCTCTAGAGATGCATGGAGATGTGTATGGCATATGATTCAGAATGACTTGGTTCATGGATGGGGCCTTGATTTTGCTCTCAGGAAATGCGTGGAGCCTGCTCACGAAAAGATTGGGGTTGTTGATTCACAGTGGATTGTTCACCAAGTGGTTCCATCTCTCGGGAACCAGGGCAAGTCAGAGAATGGAAGACCAGCATGGGAAGGGGTGAGGGCGCGGTGCAGGAAGGAATGGGGGATGTTTCAGACGAGAATGGCGGAGGCGGAGAAGGCGTACTACAAGATGATGGGCATCACCCCTCCGAACTCCACACTGGTGTAG</cdnaseq>

Protein Sequence

<aaseq>MGKLAAVVRSVLRLTNESMRIVMVTIIGVLLGFFIGISFPSVSITKLHFPSSFVSYIEDRNSGLTTQALLNHAWTSARNARENSSEPSSNTTLKIYVPTNPKGAERLAPAIVVPETDFHLRRLWGEPSEDLPFKPKYLVTFTVGYAQKENINRAVKKFSDNFAILLFHYDGRVSEWDEFEWSKRAIHISARKQTKWWYAKRFLHPDIVAAYEYIFIWDEDLGVEHFNAEEYIKLVKKYHLEISQPGLEPDRGLTWQMTKRRGDREVHKVTEERPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQVVPSLGNQGKSENGRPAWEGVRARCRKEWGMFQTRMAEAEKAYYKMMGITPPNSTLV</aaseq>

Gene Sequence

<dnaseqindica>1..29#124..232#324..467#667..771#1125..1208#1343..1458#1552..1653#1742..1855#1977..2033#2147..2213#2302..2355#2443..2517#2618..2653#2740..2853#ATGGGAAAACTTGCAGCTGTTGTTCGCAGGTTTGTATACTTCTCTTTTTATTTTGACCCCCTACACCCTCAGCACCAGAACTAATATCATCTCCTTGTTCAACTGACATGTTGATATTTGCAGTGTACTTAGATTAACAAATGAAAGCATGAGGATTGTTATGGTAACAATTATTGGAGTGCTCTTGGGCTTCTTCATTGGAATTTCATTCCCATCAGTCAGCATAACAAAGGTAAGTATAACAATGGTTTTGTCAACAGAACTGCATCATGTCAATTGACCGTAAGAGAATAACTTAATTATCTCTGTTTGAATTATGCCAGCTTCACTTTCCTTCTAGCTTTGTATCATACATAGAAGACAGAAACTCTGGGCTCACAACACAAGCTTTGCTTAATCACGCCTGGACTTCCGCCCGAAATGCAAGGGAAAACAGTTCTGAACCAAGTTCAAACACTACTTTGAAGGTACTTTATATTACTTTTCTGCACTATTAGTTTAGCTGTAGAGTACCATGAACCATTAGAATTATGTATATTCATTTGATAGTTGTCACAAAATCCTCTGCTTGAGTAAATGATGGTTTGCAAGTAATAGCTTGTATTCCTTGCCGCTGTTCATCCCAAAAGTATAAGGTCCATTGTAACAAAGATTTTGCTTTCACAGATTTATGTCCCAACGAACCCCAAGGGTGCAGAGAGACTAGCGCCAGCTATTGTTGTGCCAGAAACTGACTTCCATTTGCGCAGGTTATGGGGAGAACCAAGTGAGGTATATTTTCTTGCTCAACATACTCGTATCATTTTATTGCCAAAAATATTTGGAATTCTGGAATCTTATCTTTGTTTGTTATTTGTTCTTACTTTTATCAAGCATATACTCCTTAATCCTTTTTCAAAGGTTTTATTTTACTGTGCCTAATATGTCCTGCTATTGAGAAATTGTTGTTATATATTATTACCATGTGTCTCTTCTTGTTCATCATGTTCTGATTAAGTAAAAACTAAGAAACGTTAACCTTATATGTCCTGGTTTTCAAGTAGTTCAAAATAGAAGACCTAAACTCTGTAGCTTTCCAAGACTGTGTTGGTTGGCATGCTGATATTATGATTTTGCATATGTAGGACCTGCCCTTCAAACCAAAGTACCTTGTTACTTTCACTGTTGGATATGCACAGAAAGAAAATATCAACAGAGCAGTGAAGAAGGTAACGTTGTTGTAACTTTAGTTTGCTTAACAACTAAAATGCTGCCATCCCCAGTTTGTTTAATTTGCTTTTCAGTCTATATCCCATTTCATTAAACTCACAGGGTCTGATCATTTTGTTGTTCCGTTCTGCAGTTCTCTGACAATTTTGCTATTCTGTTGTTCCATTATGATGGTCGGGTGAGTGAGTGGGACGAGTTTGAGTGGTCGAAACGAGCCATCCATATAAGTGCCAGGAAACAAACTAAGTGGTCTGCTACTTTGCTCTGATGCTATTGTCATTCTCTCAGGTGCTCAATTTTGAAGGATATCTTCTAAATATTTATTTATGCACATACATGTAGGTGGTATGCCAAAAGATTCCTGCATCCTGATATTGTGGCAGCTTATGAGTACATATTCATCTGGGATGAGGACCTTGGGGTGGAGCATTTCAATGCGGAGGAGTACGCTTTTGCTCTTGATGTTTCAGTTGACCACTTGTTGATATGCCATCATGCCGCACTAACATATGTCTGTCGATGTATATGATAGATACATCAAACTTGTCAAGAAATACCATCTGGAGATCTCTCAACCTGGTTTAGAGCCTGATCGGGGATTGACATGGCAGATGACAAAAAGAAGAGGTGACCGCGAGGTCCACAAGTGAGTAAACATGTTCTGCTCTGCAATAGACATTTTTCAGTTAGCAGAAACCCGCTATTCTGTTAATACTACTACCTTTTTGGAACCTAGCAACTCAAGATGCAATCTTTTCTTGTCATAGGGTTACAGAGGAGAGGCCGGGCTGGTGTTCTGACCCTCATCTTCCGCCTTGTGCTGCGTATGTGATTATTTCTCTGTCCTGAGTTTTGTCTACAGTACATCCCAATATGTATGGCGTGAAAGTGCTATCCACTTGAGTTAGGCTAACTAATCTATATTGCTGTTGTTCAGCTTTGTTGAAATAATGGCTCCAGTCTTCTCTAGAGATGCATGGAGATGTGTATGGCATATGATTCAGGTTTGTATTTCATAGTAAGCTCAATTAGTATCTTCGGGCCATTCATTTTTTTTCTTCATTTATTTGATTGTGTTAATTTCCTCTGCAGAATGACTTGGTTCATGGATGGGGCCTTGATTTTGCTCTCAGGAAATGCGTGGAGGTATAGGTTACCTTTTGGCTGTTAAATTTCACCGGCCTGGTAGAACTTCATTATGAATATGCTCACCAAATGCTTTGTGCATTTCAGCCTGCTCACGAAAAGATTGGGGTTGTTGATTCACAGTGGATTGTTCACCAAGTGGTTCCATCTCTCGGGAACCAGGTAAATGAGACATCTTCCTTTTTATTTATTTTTCCAACCAAGTGTTTGCATAACTAAAGTATGCTCATTTGATACGTTTTTGCATCCAAACGATTAACAGGGCAAGTCAGAGAATGGAAGACCAGCATGGGAAGGGGTAAGAGTCTTTGAAATTTTCCGCAGACATGAACACACTAGAACTGCGAGTCCCCTTGTTTGTAACCATAATGTTTGTTCGTTCAGGTGAGGGCGCGGTGCAGGAAGGAATGGGGGATGTTTCAGACGAGAATGGCGGAGGCGGAGAAGGCGTACTACAAGATGATGGGCATCACCCCTCCGAACTCCACACTGGTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018956