BGIOSGA018957

From RiceWiki
Revision as of 02:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018957| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018957, complete gene.| tag = OSJNBA0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018957

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018957, complete gene.

LocusTag

OSJNBA0068N01.10

Ensembl Transcript ID

BGIOSGA018957-TA

Ensembl Protein ID

BGIOSGA018957-PA

Length

3928

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:428137..432064

Sequence Coding Region

431230..432064,430601..430656),complement(430436..430518,430168..430246),complement(429721..429831
,429144..429253),complement(428942..429025,428387..428424),complement(428137..428207

Genome Context

<gbrowseImage1> name=IndicaChromosome05:428137..432064 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:428137..432064 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCTTCGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCGTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGACGACGACGGTAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCATTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGTACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAACCTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCATGGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCACTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGA</cdnaseq>

Protein Sequence

<aaseq>MLRTGGGARATAAAQLLSSSSSPPPLRLPRRFLSLTATPYPLYYDLLLYRPSYPNPPKSSAADDRHTRPTDDHLDRAKRRYLRKRRSRLLPDPDATTAKPSSSSSSEFVELKPEVVDFPRLHAREEALYFHDAFALPWEKDKHYRMLYRLEKKYFPDQSLDNAFVPADASPPSSDAADKGLVFFDDDGNNKEAEVKKKKDGEDRGEVLERKVEDFFRSLKKGPGHGEANVMKAKKKEPPQVRHEADEWPQPHLASRRTELPPRWNGPTGTVVLIDKPKGWTSFTVCGKLRRLVNVQKVGHAGTLDPMATGLLIVCVGKATKVVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIRKVAASFRGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRRISIHQFDIERSLEDRQNLIFRVICSKGTYIRSLCADLGKALGSCAHLTALRRDSIGDFSVNDAWSFAELEEQITKGYL</aaseq>

Gene Sequence

<dnaseqindica>1..835#1409..1464#1547..1629#1819..1897#2234..2344#2812..2921#3040..3123#3641..3678#3858..3928#ATGCTTCGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCGTCCGCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTCTTCTTCGACGACGACGGTAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGCCCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGGCACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCGAGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGTGATGCCTCTTTATCCTCTCTTGATGAACGGTCTAATGCACGTTTCAAGAGATTGCATCAGAATTTGGTTCTGGTGTAAGAAATTAGAATGTTACCACTATTTACACAATTGCGAGCTTGTGTGCAACATTGCAGTTATTCGTGCCAAATTATTAGCAAATAGGTAGATATAGTACATCGTGTGCCAACACTAATGCTTGCCGACAGCCTTTGTTTAAAATGGTGACTGGATGGATATAATACATTCGTACATTTGAATTTGCTGTATGTTTACAAATATAGTTTATGTCATGGTTTCATGATGAGAATCTTACCTTGAGAACTAGAGTTGTTGATTTTATGTATGTTAGGGTGGACATTTTTGAGCTGACAATTCATTTATCTGAGTATGAGCAGTACATATGTGGACTTTTAGATTAGTTCCTACTAGCAGCCGTTTTTGTTAATTTGTGCACAACAAAGGTGATTAGTAAATGTCTAAAAGAGACTTGGGGATATTGCTAGAACCTTATAACCTTCTTGTCTTCCACTCCAGTTTATGGAGCTCAACATATGCCTTTCTTGTAAACCAGGCTGGACTTCATTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTAATTTTGGGATTTTTATGGTAGAATACTGTGGTTTTAGATCTTTGCTCTACAGACATGTTTATTGAATATATGATGTCAGGTCGGGCATGCTGGTACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTTGTTGATAGGTACTCTAATATTCTCAGTGAAAGCTATTTTGTCAGATTGCCTGGGACAATTTCCTGTGGCTTATCTTATTTCAAGTTCTTATTTGTGAGGATTTCAAGCGCTGCTATGTTAGAATTTGACCTGCAGTAAACCTCCTGTTCTAGCATTCTTGAAAACTTTCCTGAGTGAATGTCCATATGCTTTTAAAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCTACATCAACCTGGGATGCAGATTCACCAGTATGTATCTTGTATTCTGATAAAATGACCTACTGCATATATTTCTATTAGGAACTTCAAATCGGGTTTACTTTTAACTTGTATGACACGTGAGGAATTAATACAGTAAGACAACTTATTAAGTACACAATTAATACAATTGTGTTGGTTTGGCCAATCTTGATTAATAGAACTTGAAGTTTGGAAGATTTTTATTGGGGAACAATTAAGTTAAATCTGGTTTTTTTGCTACATTTAATCCTTGTTAAACTTTCTACATCTATATTGACTTTGGTTCAAATTATGCTTTTTTTCTGTTTACATGATGGTTATGCCTAACCATCTATGTATCATCAGGTTATCCAGAGAGAACCATGGGAACACATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCAATGTTTTCTGCCATTAAGGTACACTATCTCCTATATTACACTAAACCTGTTATTGTTTCCTTGTAGATAAAGAGAAGTTGTTGCTATAATTCTTCTGTGGGATTTGCTAACCTCGCAGTATCTCCTATACAGTTATGCTTGATAACACAGACTACAAACCATTTGAATTATATGCCGGTTGCACTATCTCAAGTTCTCAACATCTGTTGCTGTACTGTGAATTTGTGATTGCTGTTGTTATTCAACTTGTTAATGGCATAGGTGCAGTCAGGTTTGGCTGTCCCTGGTTGGCCATTTGTACATTAGTTATTATCTTATGCAAAATGCAGAATTTGTTAATAGTTATACTTTAGGTCTCATAGTGTACTGTGTAGCTTAAAGAATACATAGTGTCTTTAATCGTTATCAATCTATTGGGAGGAAAAAAAAATCCTCCAACTTGTGTTGATCAACCACAGAACTGCAATTAACTAAATAGATATCAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTAGAAGACAGGTATTCTTCCTAGTTTCCCCCTTTTTTACCTTTGACTTCCTTGAGCACAGATCTACATACGCTTGGTTCATACTGTTCGAGACTCCACCTGACATGATTTTTGTTTGTGTATTTCCAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCCCTCTGTGCAGATTTGGGGAAAGCACTCGGAAGGTCTGCTTATTATTCGGATATTCGTGTACACAGCCTTTGTTTTCATTGTTTTTTTTTTTTTTTGGTCTTTCTGCTTCAGGCGGTTCTGCATTGAGTGAGTTGATCTATGCATAGTAGTTCAATTGTTTAAAAGTGCAGAATAACCCATCTCCTTTTTAGGTTTCTAAGATTGTGATATCATCATATTAGGCTAGAAAATCACTTTATCCACTCTGAAGATAATAGAATTTCATTTGCTACAAGTATTTGCATGACATTGAACCAGGGGAAGATATTTTGAATTTATCTATTGCATTGTGGTCGGCTAGTTTCTGGTGTTGGTTCCATCATGATCTAATAACCAAATGCCGCCTTCTTTTCTTATTTTTAGGGCATGTAGTTAAAGATCCACTTATCTTTCAGTTGACGTCCGAGACTTGTCCTTTCTTTCCATTTGAGTTGCTGTCGTTGGACGTTTCCAACTTTACATCTCCTTTACATCGTGGTGACTAAATCAGATATCCATGTTTGCCTGCAGCTGTGCTCATTTAACTGCCTTGCGGAGAGACTCAATTGGTAAGTTTTCGTCTTGTGAATTTTGACTGGTTATGCATGATGATCAATTAATTTTACTGTAATTTGAACATCTCGTTCCTCAACAGTGAATTGTATATCAAAGTTATTCATACATATTTTTAAGGGACATAAGTTCCTTTGGTCCAGATCAGCCATCATATTTTAGTTTTACTTCGCAGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAAATCACAAAGGGATATTTATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018957

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018957&oldid=47713"