BGIOSGA018979

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Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018979| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018979, complete gene.| tag = OsI_180...")
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Gene Name

BGIOSGA018979

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018979, complete gene.

LocusTag

OsI_18097

Ensembl Transcript ID

BGIOSGA018979-TA

Ensembl Protein ID

BGIOSGA018979-PA

Length

4070

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:184900..188969

Sequence Coding Region

188774..188969,187451..187590),complement(187010..187096,186502..186627),complement(185947..186093
,185806..185868),complement(185589..185690,185314..185484),complement(185138..185217
,184900..184969

Genome Context

<gbrowseImage1> name=IndicaChromosome05:184900..188969 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:184900..188969 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCTGCAGTGCAAACACAAGAGAAGAAAGAGCGACGATAATAAGATTGAGAGCTCGGTGGGGAAGAAGAGGAGAGCAGAGGCCATGGATGAGTGAGCTTACGAGTGTGGCGAAGGAGGTTGCGACCGCCATTGTTGATGTTGAGGAGGAGACCCTTTCTCTCTCTCTCGCTCAGGTGGACTGGGATTGGGTAGGGAACCTGGACCTTATGAAACTATTTCTCTCCAAGGGGGTTGATGTTGAATCAGAAAGCGATGCCGGCACACCCCTCATATGGGCTGCTGGTCATGGACAGCAAGAGGCAGTCAAACTTTTGCTTCAACACGATGCTAAGCCAAATACTGAAAACGATGATGGTATTACGCCTTTGTTGTCTGCTGTTGCAGCGGGTTCCCTCCCATGCTTGGATATTCTAATTCAGGCAGGTGCACATCCGAATATCAGAGCTGGTGGAGCAACCCCATTACATATTGCTGCAGATGGTGGAAACATGGAAATAATAAATTGTTTACTTAAAGCTGGAAGTGACCCCAATGCATGTGATGATGATGGACTAAAGCCAATACAGGTTGCTGCTTTGAGGAATAACCGTGAAGTTGTGGAACTTCTTTTACCTTTGACATCACCAATTCCAGGTGTTTCGAGTTGGAGTATTGATGGAATTATAGAATACACTAAATCAGTCGAGGAAAAGGCACAGGTAAAGGAAGCTACAACTCAGAAAGCAGACAGATTACAAATACCACAACTTGTTGAGGTGTCATCTGAGGCAAAAGAGAGATCATTGGAGGCAAAATCGAGAGGTGATGATGCCTTCAGAAATAAAGACTACCTAGTAGCAGTAGATGCCTACACACAGGCTATTGAGTTGAATCCAAACGACGCCACGTTGCATTCAAACAGAAGCCTTTGCTGGCTACGGGCAGGGCAAGCTGAACGTGCTCTGGAGGATGCAAGAGCATGTCGAGCGCTGAGGCCAGACTGGGCGAAAGCTTGCTACAGGGAAGGCGCGGCACTGCGCCTGCTGCAGAGGTTCGAAGAAGCCGCGAATGCCTTCTATGAGGGGGTGCAGCTTGAGCCAGAGAACGGCGAGCTTGTGAGCGCGTTCAGGGAGGCGGTTGAAGCCGGGAGGAAATTCCATGGGACGGACAAGAAGCAAAAGGCAGATGCATCAACGTGA</cdnaseq>

Protein Sequence

<aaseq>MACSANTREERATIIRLRARWGRRGEQRPWMSELTSVAKEVATAIVDVEEETLSLSLAQVDWDWVGNLDLMKLFLSKGVDVESESDAGTPLIWAAGHGQQEAVKLLLQHDAKPNTENDDGITPLLSAVAAGSLPCLDILIQAGAHPNIRAGGATPLHIAADGGNMEIINCLLKAGSDPNACDDDGLKPIQVAALRNNREVVELLLPLTSPIPGVSSWSIDGIIEYTKSVEEKAQVKEATTQKADRLQIPQLVEVSSEAKERSLEAKSRGDDAFRNKDYLVAVDAYTQAIELNPNDATLHSNRSLCWLRAGQAERALEDARACRALRPDWAKACYREGAALRLLQRFEEAANAFYEGVQLEPENGELVSAFREAVEAGRKFHGTDKKQKADAST</aaseq>

Gene Sequence

<dnaseqindica>1..196#1380..1519#1874..1960#2343..2468#2877..3023#3102..3164#3280..3381#3486..3656#3753..3832#4001..4070#ATGGCCTGCAGTGCAAACACAAGAGAAGAAAGAGCGACGATAATAAGATTGAGAGCTCGGTGGGGAAGAAGAGGAGAGCAGAGGCCATGGATGAGTGAGCTTACGAGTGTGGCGAAGGAGGTTGCGACCGCCATTGTTGATGTTGAGGAGGAGACCCTTTCTCTCTCTCTCGCTCAGGTGGACTGGGATTGGGTAGGTAGATAGGGCATTGCACTGGGATGAATGGATGGCATTTTTGCATATGTGTGCACAGGAAATACAATAATCACACACAACCTTCTTCATTGGGGGAAGTACTATATTTTATTTTTTGGGACCAAAAGCATCTGTTAAATCAACTCTATTTGTCCCAATCCAACTATTTAAAATTTATTTATTTACAGTGTCTCTTTCTATAATATATCGGTAAGTTATCAATTATTATACAATATACCATCGGACTATACTATTTTCAAAAATACCTAAAATACACCATATAAGGTTAATATTTGATTTATCCTACCATAAGTTTCAGAAGAAAAAAAATGCTAGTTTATGCACTAGTTTTAAGATTTTACATTTTTATATTTTTTTAAAAAAAATTATTTATCCATTATATACTGCAAGAATTTTTTTTTTGCTGTTTTTAATGTAACTTTTTTCGAGAACATACCTCATTTCTAATGTAAATTATCTTTTGCGTAAGTAATTTCTCTCTCATAAAAAACTCAAAAATATTTTTTTTAAAAAAGTGAAAACTTGAAATTTATATATAAACTTTCATGTTGGGTAAGTAAGCTACATAAACAATTCATATTTTTAAACCCTTAGATGAATAAATTAATTGTTAACCTTATATGTATTTTGAGTATTTTTTAAAACTAGGACCTGAGTAAATATTTTTCTTGAGTTTTAGGTTATAAGACTTCACATTCATATATGTCTAGATCTATTAACACATATATAAATATGGACAATGCTAAAAAATAAGAATAGGAGGTGGTATTATTTTTTTTTTGGTAGAGAGGGGAGGGGGCCGCATAGGAGGCAGGAGGTAGTAAAATGGGCTGATGGGCATAGTATTCACGGGGGCCCATGTAATAGATGGGATGGGCTTGAACACACATGTAATGTAACAATAGCCTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTTGCTTCTTCCCTCGGAGCCACGCCATTGCACCATGCTGCCGGCATAGGTAAAATTCATCATCTATTTGCCATTTCACTTCATTCTTTCCATGGATTGATGGTCTATACTCTTTTCTTTTTTCTCCCATTTTGATTGTGCCAACGCCTCTATAAATGCGTCCAACACCACTCTCCTTTTTTTTTTGTTTGCATCTGCAGGGAACCTGGACCTTATGAAACTATTTCTCTCCAAGGGGGTTGATGTTGAATCAGAAAGCGATGCCGGCACACCCCTCATATGGGCTGCTGGTCATGGACAGCAAGAGGCAGTCAAACTTTTGCTTCAACACGATGCTAAGGTTGCTCCTCAATAAATCCACTATCTCCTATCTCACTTCATATCTCACTGATTTAACGAACCTGAGCTTCTAGTCATTCTGTTCAGAAATCTTCATTATGCTGAAATTTTAATATGTCGCCTTTTAATATTGTCAAATACTAGTAGCAACTGACACTTTAACAGTAACCACCAAGGGTTCTCAAGCTTGCTATTGTTAAGAAGATGCTATCTTTTGGTTCTAATAGCATCTGTATCTATTATGTTTCTTTGAATTGGACAGGCTTCTCTTTGTTTAGCACTCAACCACCTTTCAATCAGCCGTTCATGTGGCCTTTCCTTAACTTTTTTACTGAAGCTAGTTATTGCTTGGCAGCCAAATACTGAAAACGATGATGGTATTACGCCTTTGTTGTCTGCTGTTGCAGCGGGTTCCCTCCCATGCTTGGATATTCTAATTCAGGTACACAAATCTAATTTCAAGAGTAAAATACCAAAATCTGTTGCTTTTACTTTAGGATATTATCCACTTCGATGCCATTCATTGGTCATATGGTTTCTGTATGCTATATTTCCTTGTTTAGTAATCTGGCTTGTGCAATGGGGGTTCAGACAAGCTCATTTTTCGTGTTATTGATTAGATTGCTGCATGGCAAATCATAGTATGTCACGTTCTTATATGTGTGCTACCTATATCAAAAGATTTTGATAAGAGGATCAAAGTGTCTGTTCTTACTTTTGTCATATGCTGTTTCTGTTCTTGGTTTTGTTTGATGCTCTGTTGCTTCTACACCCCTTACATCTATGATTCGTATAAAAAACCGATCATATAATCTGCTACACAGGCAGGTGCACATCCGAATATCAGAGCTGGTGGAGCAACCCCATTACATATTGCTGCAGATGGTGGAAACATGGAAATAATAAATTGTTTACTTAAAGCTGGAAGTGACCCCAATGCATGTGATGATGTAAGTTGTACATTAATCAGAATTCCAGTGTATCATTAAATATTTAAATGTCAATAGCCAGGTTCATGTGCATTGATTGGTCAAAATGATTCGTAAGAGGGTGTCAAGCGTTTGCTGTTTGTTCCACACCATGTATTATAATGAATATCCCTTTCTTGGTCAGCATGTGTTACTCTGAAAATTTCCACCGTTTCATTATGCAGTGAATAACTATTGTAACCCTGTAGTGTATTGTTTAGCTGGATTGGCAACTGCTTTTGCAATTCCATCATCTGTCCTTTCTTGCATTATTATTGAGCAAACAGCACTGGGCTGCATAATTTCACTGAAGGACATGACTGTTGATTTTGGTGTAGCAGTAGAGCTAAGTAATGCTAATGGTTGAATAACTATTATATTCTTCTACAGGATGGACTAAAGCCAATACAGGTTGCTGCTTTGAGGAATAACCGTGAAGTTGTGGAACTTCTTTTACCTTTGACATCACCAATTCCAGGTGTTTCGAGTTGGAGTATTGATGGAATTATAGAATACACTAAATCAGTCGAGGAAAAGGTGCAACTTCAATCTTCTTATGATCTATTACTAGTTGCAAGTTCTTTGTCGATCCCAATGGTTGGATAAATTTTGCAGGCACAGGTAAAGGAAGCTACAACTCAGAAAGCAGACAGATTACAAATACCACAACTTGTTGAGGTGCATTGCAATTTACTTTATAGTTTTATTCATCTTCAAGGCTCCAACTATTTAATAACTGTAAGACTCAAGATCTAACTATTGCTGCAAATGGTGCTTTCCTGACACTGTACAGGTGTCATCTGAGGCAAAAGAGAGATCATTGGAGGCAAAATCGAGAGGTGATGATGCCTTCAGAAATAAAGACTACCTAGTAGCAGTAGATGCCTACACACAGGTAAGAACCAAACCGCAAGACAGCGTGTATTTTTAGAAAAGGCGCATAAGTTTATCATATGAACTCAAATTCAAAGAGTAGAATGGAATGGAACTACATTTCAGGCTATTGAGTTGAATCCAAACGACGCCACGTTGCATTCAAACAGAAGCCTTTGCTGGCTACGGGCAGGGCAAGCTGAACGTGCTCTGGAGGATGCAAGAGCATGTCGAGCGCTGAGGCCAGACTGGGCGAAAGCTTGCTACAGGGAAGGCGCGGCACTGCGCCTGCTGCAGGTCTGTTGATTTCAGTGATAAGTTTGGGAACTGATAGGCAGTTGTGATTACCTACCTATATATTTGTTGCTGAAGTTGTTCCGGTGATACCAACAGAGGTTCGAAGAAGCCGCGAATGCCTTCTATGAGGGGGTGCAGCTTGAGCCAGAGAACGGCGAGCTTGTGAGCGCGTTCAGGTAGTAAAGCCTTCCTCTGTGAGCAAAGAAAAGCAATGAATTCCTCCGTTGTTTAGCAATTAACATAGACATATATAGGGTGTCGTTATGATTGGTTTGGAACTCATGTGTGTATGTGTTTGTTATTCCATGCGACAAGTGAAGTTGATTACTTAAACTGATTGACAGGGAGGCGGTTGAAGCCGGGAGGAAATTCCATGGGACGGACAAGAAGCAAAAGGCAGATGCATCAACGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018979

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018979&oldid=47735"