BGIOSGA018983

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Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018983| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018983, complete gene.| tag = P0668H1...")
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Gene Name

BGIOSGA018983

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018983, complete gene.

LocusTag

P0668H12.3

Ensembl Transcript ID

BGIOSGA018983-TA

Ensembl Protein ID

BGIOSGA018983-PA

Length

5564

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:151592..157155

Sequence Coding Region

157048..157155,156895..156940),complement(155951..156268,155391..155791),complement(155137..155295
,154638..154754),complement(154408..154559,153916..153995),complement(153428..153820
,152658..153252),complement(152469..152553,152316..152384),complement(151903..152082
,151592..151756

Genome Context

<gbrowseImage1> name=IndicaChromosome05:151592..157155 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:151592..157155 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGATAGCTTCTGGAGCCATTGACAGGAGGCACCTGTCGCCATTCACCCCAACTTCAGACGACTCCTCATCTTCATTCTTCTCTCAGGACCTTGTCCCTACAGAGAGGCAAGTTGGATTTTGGAATTCAGAGTCAATGGTGGATCACAAAGGGAGCAAGTCAGTTTTTGCTTCTCCACTTGACAAGATCCAACCCAATGGAGCAAATCATGCAGGAGATCCGGAAACTCCAGGAGGTCAAGCCTTCAAGGGCCTGGACATCCTTAGCCTCAGCAATTTGATGCGGCAAGAAAATGCTTCAGGTTCACCGTCACTTTCTTGGGGTGAGATCCTCACAAACCCCATATCGAGGCTTGGCTTGTCTACAAGAGAAACAGCTTTTGTTGAACCAACTACTGCTGATCAACATGTGCCTGGTTATGGGAAGGGACTTTCATCCAGCTCCCTCTCTGAAGTATTCAGTGGCAAATCGAGAGAAATAGTAAGTGGTGTTCTTTGTCAATCTACTGGGACACATACCTCCATCTACGACAGTGATGAACCTCTAGAGTCCATGGAAGCGATAGAAGCTCAAACTATTGGAGATCTCCTTCCTGATGATGATGATGATTTAATATCAGGTATTGCCGATGGATTTGAATTTACTGGCATGTCGACCAACCAGGATGATGCCGATGAAGATATATTCTGCACTGGAGGAGGAATGGAACTTGAAAACAATGATTCCGTAAAAGGTGACAAAGTTCAGGATGGATCCTTCAAGAGCCAAATTTCTTCAGGACACTCCATCAATAAACAACCTTCCCGAACTCTTGTAGTCAGAAATATTACTGCTAACATCGAGGATTCTGATCTGACGGTTCTGTTTCAGCAATACGGGGACATTCGCATGCTCTATACCTCCTTCAAGCACCATGGGTTTGTAACTGTTTCTTATTATGACATAAGAGCAGCCCAAAATGCAATGAGAGCGCTGCATAGCAAGCCTCTGGGGCTGATGAAACTTGATGTGCAATTTTCTTTTCCTAAGGAAAATGTTCCAGGCAAGGATATTGATAAGGGAATGTTGGTGGTATCTAACATTGATTCTTCCATCTCCAATGATGATCTTCTCCAAATGCTCAGTGTTTATGGTGATGTAAAGGAGATTTCCAGCTCTCCTATAAGCTGCACCAAGAAGTTTGTAGAGTTCTATGATGTTAGAGCAGCAGAAGAAGCACTACATGACCTTAATAAGGGTGGAATTTCAGGCCCAAAGTTCAAGGTTGAACTTAGCCAACATGGAGAGGCAGGATCTTGCTTGAGGCAGCAACATTCTAGAGAATGGAAGCAAGACAGTTTGCCTCACCAACCTAAAAACTCTTCACCTGGGACCATTGGAAAGTTGGGCACCAAATGTCAGGACAACAGCACTGTTCATAATTTATTTTCTCCAGTTAACCAACAATTGGAGAGCCCAACCCAGTGCATCTCTACGACTGGTCCTCAAATTTTATCTTCACCTATCAGAATTAAATCTACACTTCAGCACAATAATCAAGACTCTGTTGGCGATCTTAGTGGACCTCTTGGTCAAGGAAACTTTGGACGTGGAATACAAACCCTCCACCCACGCTCATTGCCAGAGCATCACAACCGCATTTGTAATAACTCTAAGTCCATGACAGTAAGTGGTAGGAATGCTAGCTCTAGACAAGACGGAGTGGATCACAATATCCAAAAAGTGGGCCCTGCTGGTTTTTGCGGTCATTCTTTTGATCAAAATAATGAAGCATTTGGCTTTACTGAAATTGGAAGTTGCCCCCTTCATGGATATCACTACACCTGGAACCACACAAATGTTTTTCCACAAAGTCCCTCAGCTCCAATACTGTGGTCGAACTTGCAGCACCCAATGCACGTGCATAGTTATCCTGGTGTGCCGCCTCACATGCTGAACACAGGTTCTTATCCCATGGACCAGCATCACTTGGGTTCAGCTCCTGACAATGGAGGCAGTTTTGGAAATGTGCACTCTTTTCATCCAGGATCTCTCGGAAGCATAGGTTTGCATGGTAGCCCTCAGTTATATCCATCAGAATTATCTGCCTTTGCATCCAGCAGAGGAAATTTTAGGGAGGCCATGTTCTCCCCAGTTGGCGGTGGATTTCAATCCCTTCAGCAAATGTGCAATGCAATCAATGGTCGGAATCCTATGATCCATGTTTCCACTTCATACGATGCTACTAATGATCGGATGAGGAGTCGCAGACATGATGGAAATCCTGCACAGTCTGAAAACAAACGGCAATTTGAGCTTGACATTGATCGCATAGCAAAGGGTGAAGATTCACGCACCACCCTGATGATCAAGAACATACCAAACAAGTACAACTGTAAGCTGCTTTTGGCTGTCATTGATGAGAACCACCGTGGAACCTACGATTTCATCTATCTCCCAATTGATTTTAAGAACAAATGTAATGTGGGGTATGCTTTTATCAATATGACTGATCCGCAGCACATAATCCCATTCTATAAGACATTTAATGGCAAGAAATGGGAGAAATTCAATAGTGAAAAGGTGGCGTCGCTCGCATACGCCCGGATTCAAGGAAGGAGTGCTTTGATTGCTCATTTTCAGAATTCTAGCCTGATGAATGAAGACAAATGGTGTCGACCTATGCTTTTCCACAAAGATGGTCCAAATGCAGGAGATCAGGAGCCTTTTCCTGTGGGGAACAATGTCCGGTCTAGGGCTGGGAGAAATAGGTCGCTCATCAGCTTGGACACTAAAGATGCAAGTCCATCAAGCTCCCCAGACCAAGAAAGCAATTCTGTCGGCACCGCGAACTCAACTTGCCGTACGACCTTGGAGCAAACCTAA</cdnaseq>

Protein Sequence

<aaseq>MVIASGAIDRRHLSPFTPTSDDSSSSFFSQDLVPTERQVGFWNSESMVDHKGSKSVFASPLDKIQPNGANHAGDPETPGGQAFKGLDILSLSNLMRQENASGSPSLSWGEILTNPISRLGLSTRETAFVEPTTADQHVPGYGKGLSSSSLSEVFSGKSREIVSGVLCQSTGTHTSIYDSDEPLESMEAIEAQTIGDLLPDDDDDLISGIADGFEFTGMSTNQDDADEDIFCTGGGMELENNDSVKGDKVQDGSFKSQISSGHSINKQPSRTLVVRNITANIEDSDLTVLFQQYGDIRMLYTSFKHHGFVTVSYYDIRAAQNAMRALHSKPLGLMKLDVQFSFPKENVPGKDIDKGMLVVSNIDSSISNDDLLQMLSVYGDVKEISSSPISCTKKFVEFYDVRAAEEALHDLNKGGISGPKFKVELSQHGEAGSCLRQQHSREWKQDSLPHQPKNSSPGTIGKLGTKCQDNSTVHNLFSPVNQQLESPTQCISTTGPQILSSPIRIKSTLQHNNQDSVGDLSGPLGQGNFGRGIQTLHPRSLPEHHNRICNNSKSMTVSGRNASSRQDGVDHNIQKVGPAGFCGHSFDQNNEAFGFTEIGSCPLHGYHYTWNHTNVFPQSPSAPILWSNLQHPMHVHSYPGVPPHMLNTGSYPMDQHHLGSAPDNGGSFGNVHSFHPGSLGSIGLHGSPQLYPSELSAFASSRGNFREAMFSPVGGGFQSLQQMCNAINGRNPMIHVSTSYDATNDRMRSRRHDGNPAQSENKRQFELDIDRIAKGEDSRTTLMIKNIPNKYNCKLLLAVIDENHRGTYDFIYLPIDFKNKCNVGYAFINMTDPQHIIPFYKTFNGKKWEKFNSEKVASLAYARIQGRSALIAHFQNSSLMNEDKWCRPMLFHKDGPNAGDQEPFPVGNNVRSRAGRNRSLISLDTKDASPSSSPDQESNSVGTANSTCRTTLEQT</aaseq>

Gene Sequence

<dnaseqindica>1..108#216..261#888..1205#1365..1765#1861..2019#2402..2518#2597..2748#3161..3240#3336..3728#3904..4498#4603..4687#4772..4840#5074..5253#5400..5564#ATGGTGATAGCTTCTGGAGCCATTGACAGGAGGCACCTGTCGCCATTCACCCCAACTTCAGACGACTCCTCATCTTCATTCTTCTCTCAGGACCTTGTCCCTACAGAGGTACTAGTAATAAACAAACCAGAAAACCATCCTGCCTGCCACTGATTTCTTTTTATTCTGCAAGACTGTAGCACCTCAATTATTTTCCCTTCCATGCTTCATTGCAGAGGCAAGTTGGATTTTGGAATTCAGAGTCAATGGTGGATCACAAAGGTGTGGATCATGCTTCATTTGAAAATTATTATCTCATGGTTGTTGCTTCTTACATGATGGAAATTATTCAGATTGGTGCTCTCTTCTGTATTCTTGTTAATAGTAATCTCCTAAATAGATCATACCTGACTTGCCTTACCCAACTTATGCTTGAAAGAACAGTTCGGGAACTCATCTTTCATGTTTATGGGAGATATTGGTGATTGCTTGTTATTGTGGTCACTTCCCGCCCGTTCTTTGCCACCAATTTAACTAACTAACTATAACCTATAAAACCAGAATTTTTAGGCTGTTGTATCATTTTATTAGTTCAGATTATTTACTGCCAGGGATTTCCTGTTTAGACTAGATACTGCACTGGTTGGCTAAAAGTGATCAAGTATCCAATTTTGGTAGGTAAAGATATCCCTGAAACAGTTCAGCAGGGAATGAGTAGGAACTTTACTTGTGGGAGAATGCTTACGGAATTTTGTCCCAAGACAGTTTGGTAGGAACTAGTTGGACGGTTAATTTAGCACAGTTCGATATTAAATGATCAATTTATCATATGATACATGTATTGAAGATTGTAATATGGTGATAGGTTAAATAGTTCTTCAGGAACTGACTGTGATCATTAATGGCAGGGAGCAAGTCAGTTTTTGCTTCTCCACTTGACAAGATCCAACCCAATGGAGCAAATCATGCAGGAGATCCGGAAACTCCAGGAGGTCAAGCCTTCAAGGGCCTGGACATCCTTAGCCTCAGCAATTTGATGCGGCAAGAAAATGCTTCAGGTTCACCGTCACTTTCTTGGGGTGAGATCCTCACAAACCCCATATCGAGGCTTGGCTTGTCTACAAGAGAAACAGCTTTTGTTGAACCAACTACTGCTGATCAACATGTGCCTGGTTATGGGAAGGGACTTTCATCCAGCTCCCTCTCTGAAGTATTCAGTGGCAAATGTGAGTTCCCTTTGCCTTCTTTTTTTCCCCTACAAGCCATGTTGATAGTAGAATTTTATCATCTTAGTTGCACTACAACCAAAAGTACTGTTTTTGAAAGAAACCACAATATTGTTCATTGAAGATTAATCTTTTCTAAGAGTTCATGATGTTCTGCAGCGAGAGAAATAGTAAGTGGTGTTCTTTGTCAATCTACTGGGACACATACCTCCATCTACGACAGTGATGAACCTCTAGAGTCCATGGAAGCGATAGAAGCTCAAACTATTGGAGATCTCCTTCCTGATGATGATGATGATTTAATATCAGGTATTGCCGATGGATTTGAATTTACTGGCATGTCGACCAACCAGGATGATGCCGATGAAGATATATTCTGCACTGGAGGAGGAATGGAACTTGAAAACAATGATTCCGTAAAAGGTGACAAAGTTCAGGATGGATCCTTCAAGAGCCAAATTTCTTCAGGACACTCCATCAATAAACAACCTTCCCGAACTCTTGTAGTCAGAAATATTACTGCTAACATCGAGGATTCTGATCTGACGGTTCTGTTTCAGGTATTGAACCTTTTCCTTATTTCATTTCAAATTTTGGTTTTAGTTTAGTAAACAATATCCTTTTGAACCTATATACACACATATATATCTTTCAGCAATACGGGGACATTCGCATGCTCTATACCTCCTTCAAGCACCATGGGTTTGTAACTGTTTCTTATTATGACATAAGAGCAGCCCAAAATGCAATGAGAGCGCTGCATAGCAAGCCTCTGGGGCTGATGAAACTTGATGTGCAATTTTCTTTTCCTAAGGTATGCATAATAATATCAGTAGTTTTGAATTAGGCATGCTACCTAATCTATATATCTTCCTTATCATGCCATTTGTTACTTGGGCAATGTTGTTCTGTTTCATTTTTCATTCTAACTTGCTACAAAATCATGCTATTACTTTTACTGGTGCCCCTTGTTTATTTATTGGTTTTTGTTCCTTTTAGCATGCAATAATCATTTATATTCTATGTTTTGAAAATTAAATGCTGTTGTTACATAGTACTGAGACACGCAGTCGTTCCGGTAATTGCGCTACTTCTAACATGCTATATATTTGCTCTAAATCTGTCTGCATGCCACTTTATGAGTTCAATAGTTAAACACTTAATATCTGATGCTGTCATGTCGCGTATTTTGCTAGGAAAATGTTCCAGGCAAGGATATTGATAAGGGAATGTTGGTGGTATCTAACATTGATTCTTCCATCTCCAATGATGATCTTCTCCAAATGCTCAGTGTTTATGGTGATGTAAAGGAGGTAGCTATACTGCCATAATTGAGTAATTGACTACAAAACTGAAATCCGCACACTATGGTAATCATTTGTTGTTTATAGATTTCCAGCTCTCCTATAAGCTGCACCAAGAAGTTTGTAGAGTTCTATGATGTTAGAGCAGCAGAAGAAGCACTACATGACCTTAATAAGGGTGGAATTTCAGGCCCAAAGTTCAAGGTTGAACTTAGCCAACATGGAGAGGCAGGATCTTGGTAATTTGCTTGGCTGAATTTTTTTCTACCCGTTTTTGGTATTATCTTTTCATACTCGTGCTAGCTATCGTTGCCTTCCTTCATACTATAGGTTTAGTATGTTAGTTACCTTTGGGAGATGGGATAATATCATAATAAAATATGTTCACTGTTTTCTTAGGTAAAATTATGCAAATACTCCTAGATGCAAGGAATGTATCTCAAGTTCTCATTCACGGTTTTTCTCATAGCTTTGCAGCCACTAACACACCTATTGGTCGTTCTTTCATTTTGTGGAACAGCCAAATATCAACTCTATGTCAATCACTTGAACCTTTTAAATTTTCATTAGGGACAAACCAACTGGGCGTGTAACTTTTTTTTAAGCGTTATTTGATTAGTGTGGTGAAGATTTTATTTATGTACTTAACAGCTTGAGGCAGCAACATTCTAGAGAATGGAAGCAAGACAGTTTGCCTCACCAACCTAAAAACTCTTCACCTGGGACCATTGGTACAATATATTACTTGGATATATTTTGGAAATTGTTGATCATTTCCTAGTTTGAGATATTTTGACTTATTTTGCCCTTTTTCATGCCAAAACAGGAAAGTTGGGCACCAAATGTCAGGACAACAGCACTGTTCATAATTTATTTTCTCCAGTTAACCAACAATTGGAGAGCCCAACCCAGTGCATCTCTACGACTGGTCCTCAAATTTTATCTTCACCTATCAGAATTAAATCTACACTTCAGCACAATAATCAAGACTCTGTTGGCGATCTTAGTGGACCTCTTGGTCAAGGAAACTTTGGACGTGGAATACAAACCCTCCACCCACGCTCATTGCCAGAGCATCACAACCGCATTTGTAATAACTCTAAGTCCATGACAGTAAGTGGTAGGAATGCTAGCTCTAGACAAGACGGAGTGGATCACAATATCCAAAAAGTGGGCCCTGCTGGTTTTTGCGGTCATTCTTTTGATCAAAATAATGAAGGTAACAGTTCTCAGCTTCAACTGCTCATTGTTGGCTTTACTAACCTATGTTTTTATTATCATAACAACATAATGGTGAACCTTTTTGGAAATATTGGATGATGTAGTTGATGAATTGACCAGCTTAATGATTTTTTTTGTTAGAATTTCATCAGCACAGAAATTGTTTTTTGCAGCATTTGGCTTTACTGAAATTGGAAGTTGCCCCCTTCATGGATATCACTACACCTGGAACCACACAAATGTTTTTCCACAAAGTCCCTCAGCTCCAATACTGTGGTCGAACTTGCAGCACCCAATGCACGTGCATAGTTATCCTGGTGTGCCGCCTCACATGCTGAACACAGGTTCTTATCCCATGGACCAGCATCACTTGGGTTCAGCTCCTGACAATGGAGGCAGTTTTGGAAATGTGCACTCTTTTCATCCAGGATCTCTCGGAAGCATAGGTTTGCATGGTAGCCCTCAGTTATATCCATCAGAATTATCTGCCTTTGCATCCAGCAGAGGAAATTTTAGGGAGGCCATGTTCTCCCCAGTTGGCGGTGGATTTCAATCCCTTCAGCAAATGTGCAATGCAATCAATGGTCGGAATCCTATGATCCATGTTTCCACTTCATACGATGCTACTAATGATCGGATGAGGAGTCGCAGACATGATGGAAATCCTGCACAGTCTGAAAACAAACGGCAATTTGAGCTTGACATTGATCGCATAGCAAAGGGTGAAGATTCACGCACCACCCTGATGATCAAGAACATACCAAACAAGTAGGTTCTGCACATCTTGCCACCAGTTGCCAGCTGTCTTGCACATTACTCAGGTATCTTTTTTTTCTTCTGTTGACTCAAGTCATACTTGATGTGATCCACAGGTACAACTGTAAGCTGCTTTTGGCTGTCATTGATGAGAACCACCGTGGAACCTACGATTTCATCTATCTCCCAATTGATTTTAAGGTCTACTTTTTTTTTCTTAGTGTAAAAGATTGCAACTGTGAGTACAATTTCAGGACTGACTTTTGCAATGTTCACTTTTCTCAGAACAAATGTAATGTGGGGTATGCTTTTATCAATATGACTGATCCGCAGCACATAATCCCATTCTATAAGGTATACATATCATGCATGCATTACTAGTTAAGCTTCTCCGTTTTTAATGTACCTTCCAAGATCTAAGCATAGCATATGATATAACAGTATTTTTATTATTGTGTTGCATTCTTTTTTGTGGGAGGAAGATTTTTTAAAAAGTATTTCTGCCCTGTAGAGTACTGCCAGTTTTCCCCTGGCATTTTCTAATTGAAAGTATGCATAGGATTAATTGGACTTGACATTTGCTGCAGACATTTAATGGCAAGAAATGGGAGAAATTCAATAGTGAAAAGGTGGCGTCGCTCGCATACGCCCGGATTCAAGGAAGGAGTGCTTTGATTGCTCATTTTCAGAATTCTAGCCTGATGAATGAAGACAAATGGTGTCGACCTATGCTTTTCCACAAAGATGGTCCAAATGCAGGAGATCAGGTGTGAATATCTCTAGTGCTTATTGTATACACTAAATATACCATATGAGTGACCACTTCTGACTGACCCTATTCGCACAAAATGATTGACATGGCGGTTTTATACATATTATTATTTTCTGATAAAGATACATATTATTATTGCAGGAGCCTTTTCCTGTGGGGAACAATGTCCGGTCTAGGGCTGGGAGAAATAGGTCGCTCATCAGCTTGGACACTAAAGATGCAAGTCCATCAAGCTCCCCAGACCAAGAAAGCAATTCTGTCGGCACCGCGAACTCAACTTGCCGTACGACCTTGGAGCAAACCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018983

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018983&oldid=47739"