BGIOSGA018995

From RiceWiki
Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA018995| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA018995, complete gene.| tag = P0036D1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA018995

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA018995, complete gene.

LocusTag

P0036D10.7

Ensembl Transcript ID

BGIOSGA018995-TA

Ensembl Protein ID

BGIOSGA018995-PA

Length

3658

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:77118..80775

Sequence Coding Region

77118..77172,77265..77485,77577..77634,77892..78064,78149..78332
,78444..78614,79104..79135,79217..79259,79381..79448
,80174..80218,80308..80775

Genome Context

<gbrowseImage1> name=IndicaChromosome05:77118..80775 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:77118..80775 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCACCGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGAGTGGTTGCAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCTTTCCGACGAGTCCCCGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATCATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATTGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTACGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAGAGGCGCTTGTTAATGGCAGTGACGCCGGACGTAGTGAGATCGAAGAACAAGCAGAAGCCATCTAG</cdnaseq>

Protein Sequence

<aaseq>MATGDPNPTTTPPSQQLQGVVAGADPQPQSQQDAAANATPAAVAVREDYVQNAVKFLSHPKVRGSPVLYRRSFLEKKGLTKDEIDEAFRRVPDPQPSATATAAASPSPSQHPNNQNHSSTVVQPYAPRQPATPAGSIIVATQPKFSWYRAFVAAGLLLGFGVSAAVFVKKLLLPRLKSWIRKVVAEGDENEGRQIKSKIDEETAEAVKASASAVSAIAKTNQELLASKDEEKKILVTLTQALDSQAKELKSLCESLNHSRDSINITREDRFSQYRALEEHAPSAARNGPVNTPWRASQQTNMYGVPNSDFGSGRPSFASTHNEATPGSFSRSYVETSAAHRGDNRSSGSKPWEMQQYSQQRIGYGSNSQLSDDGCPETQDNYGGGPSYSYHQNQNQNGKAPAPDIQAEEARPSVYISGAEERSPPPPPQRRWVPPQPPGVVMPEAVAAIRQPKSLAKQPSSEASQEAAGETHANGASSSSPLPEEALVNGSDAGRSEIEEQAEAI</aaseq>

Gene Sequence

<dnaseqindica>1..55#148..368#460..517#775..947#1032..1215#1327..1497#1987..2018#2100..2142#2264..2331#3057..3101#3191..3658#ATGGCCACCGGTGACCCAAACCCTACCACCACTCCGCCGTCGCAGCAGCTGCAAGGTCTGTATTCTTGATTCCCCCGCACATATCTGATTCTTGATTTGATTGGAATTTGGAATTTGGAAATTTGGATTGGGTGGTTTGACTGACAGGAGTGGTTGCAGGAGCAGATCCCCAACCCCAATCCCAGCAGGATGCCGCCGCCAACGCCACTCCGGCGGCCGTGGCCGTGAGAGAGGATTATGTCCAGAACGCCGTCAAGTTCCTCTCCCACCCCAAGGTCAGGGGCTCCCCCGTCCTCTACCGCCGCTCCTTCCTAGAGAAGAAGGGCCTTACCAAGGACGAGATCGACGAGGCTTTCCGACGAGTCCCCGTAAGTGTATCATCTCATACTCACACCCCCCCTTCTTTCTTGGGTCTTTCAGTTTTGCTACCGCTAAATTGCTTGCCCTCCTACACTACAGGATCCGCAACCCAGCGCTACTGCTACTGCTGCTGCTTCCCCTTCGCCTTCACAGCACCGTAAGCTTAACCTTCTTTCTTCTTCTCTACTTAGTTTGACATACTTAGCAATATACTTATAAGAGCACTAGTCTTCTTTCATCCCACCAAATATCCACCTGTTATGATTCCATCCACGTCTTGTGTCGAGTCAAACAATGGTACCTGCACAAATTGTGTCTCATAGCTAAAGTGTTTACAAGGACCATTCAGATGTATGTACTCACCTTCTTACCTCCATGTCGATCATATGCCTTGTCTTGCTTGCTTTGCTGCAGCCAACAACCAGAACCACTCTTCTACCGTTGTGCAACCTTATGCACCAAGGCAACCAGCAACACCTGCTGGCTCTATCATTGTTGCCACACAGCCCAAGTTCAGCTGGTACCGTGCATTCGTCGCTGCAGGGCTATTGCTTGGTTTTGGAGTTAGTGCTGCTGTGTTTGTCAAGGTATCTTCTGCTCACCTCTCCACATATCTGAAACTTTTCAACTCACTGATTCATCCATAAATCAAATTTGCATGTCTTGCATAGAAATTGCTCCTTCCTAGGCTTAAGTCTTGGATCCGCAAGGTCGTAGCTGAAGGTGATGAAAACGAGGGCAGGCAAATTAAGTCCAAGATTGATGAGGAAACTGCTGAAGCTGTAAAAGCTTCTGCATCTGCTGTTTCTGCTATTGCCAAAACTAACCAAGAATTGCTTGCTTCAAAGGATGAAGGTTTCACAGTGCTCCCCTTTGTTGTTGGCTATCCCAATTCATCTAAACATACTTCATATTTTATATATTTTCTTATATCACTCATTCTGATTATTGCATGTTTGTTGACAGAAAAGAAGATACTTGTGACATTAACACAAGCACTAGATTCCCAAGCAAAAGAATTGAAATCCTTATGTGAGTCTCTGAACCATAGCAGGGATTCTATAAATATTACCAGGGAAGATAGGTTTTCTCAGTACCGGGCATTGGAAGAGCATGCCCCTTCTGCTGCAAGGAATGGTCAGTACCTAATTTCTCCATCATTTTATAGTTAAGTGCTTGTTTCTTTGCATACAATCGCATTGCAAGGTTAGCCTAGGTATGCGGAAAAATATATGGTGGAAACCACATATGTAGTGGAAACCCGGAAACTACTGTTGGATTGAAAAATAGACGTCTGAGATTTGTCCATGTCATTACGAGTAAAAATTTTACTCGCAGATTTACTCATGAGTAGAAATTTTATTTGGTGTCGTGGACGAATCTCGTACATCTATTTTTCGATCCAACGGCAGTTTCCAGATTTCCACTACATATGTGGTTTGCACTACATACTTTCCCTAGGTATGCTGCAACCATACTGGCAGGAGACTATAAATGCTACCTTTGCCTATTACCGAAAGCATTCTTTATTTTTCTTCTATTGTTTGGCATCACTTCATTTTACGATTGAATGTAATTATTAACCCTGATAACTATGAGTCTCACCATATTGTTTGCGACTTTTAGGGCCAGTTAACACTCCATGGAGAGCCTCTCAGGTGTGTTGTACATTGTTCCTTTTCCACTCCAATAACGTGATCAAGATAACAGGAATATCTGACTCATTTCCCTTTTTGTAGCAAACTAATATGTATGGTGTGCCAAACAGTGATTTTGGCTCAGGTCAGTAAAACTTCAAGTTCCTTCCTGCTCTCTCTCTCTCTCTCTCTCTTTGTGCGCGCGCGCCTGGTGTGTCTCTGGTGTTACCCTACTTTTCCCAACCATTAGCTGCTTGTTTGAGCAGGGAGGCCTTCATTTGCGTCAACACATAATGAAGCTACACCTGGATCATTTTCAAGATCGTACGTTGAGGTAGGCAACTGATCACGCTGTAAATCAAGATTTGCTGAAATTAGCTGGGCATCAATTTTAGGCACAATTTAGTGTTTTGTGGTGCCCATGTCACATTACTTCCTTATATCTCAAAAGAAATAATTATTTCCTATCTAGCCTTTAACAGTATCACATTGCAGCCAATGAACTCCTTTAAATCATAACCAAATATCGCACATCAACCAATAAATTTGTCGAGCAATATAGCTTCTTTTCATATACTAGTACCTTTCTAAGCCCATGGCAAGCTGTTCAATTGTATTTAGCTGGTGCGGCCCTTTAGGTCATTTTTATAAACTGGGCTATTTTTTTAACCCTCAGATGAATAGATTTTCTCAAAGTAGTACAGCTCGATCTTCAAATATAATATATTTCTCATGTTTAACATACTTTTATAGCATTTCTAATAGCTCAACTTGACCTGCTTTCAAGTTTCAAGATCTGCCATCAATATGTTACTATGTTACAACTGTGTTCTACCCTCTGTAAAAACAAGACTGCACTAATCGATCATGCTCCTGTGTATGTACAAATGAATAATAATGTCATTAGTTCATTTTTGTCATCTTCCTTGTGTTGCCCTTTTTTGCGGGATCTTCTGTTGTGGTTATGTGCGGTTAACGCTGGAAGAATGCCTCCTACTGGACCTTGATCTTCTATCCTAATTATTTCTACTATCTTAATAATGTTTATGCTTTCTGCAGACATCTGCTGCACACCGAGGGGATAATAGGTCTTCAGGGAGTAAGGTGTGGTCCTGAACCTTTATTTTCTTTTGCTGTAACATGAGGAACTTGGAAGCTGACATTTAAAGGCTTTGCATGATGAAAAACTACAGCCATGGGAGATGCAGCAATACTCACAGCAGAGGATTGGCTACGGATCCAACAGCCAGTTGAGTGATGACGGATGCCCTGAAACTCAGGACAACTATGGCGGGGGACCTTCGTATTCGTATCACCAGAATCAGAATCAGAACGGGAAGGCTCCGGCTCCGGATATTCAAGCAGAGGAGGCCAGGCCATCGGTATACATAAGTGGGGCTGAGGAAAGGTCGCCTCCGCCTCCGCCTCAGCGCCGCTGGGTTCCCCCGCAGCCTCCGGGCGTTGTGATGCCGGAAGCTGTGGCTGCCATCCGTCAACCAAAGTCCCTCGCAAAGCAACCGTCGAGCGAAGCTTCTCAAGAGGCAGCCGGCGAGACGCATGCCAACGGTGCTTCAAGTTCGTCGCCTCTTCCTGAAGAGGCGCTTGTTAATGGCAGTGACGCCGGACGTAGTGAGATCGAAGAACAAGCAGAAGCCATCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA018995

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA018995&oldid=47751"