BGIOSGA019005

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Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019005| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019005, complete gene.| tag = P0668H1...")
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Gene Name

BGIOSGA019005

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019005, complete gene.

LocusTag

P0668H12.12

Ensembl Transcript ID

BGIOSGA019005-TA

Ensembl Protein ID

BGIOSGA019005-PA

Length

6821

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:209487..216307

Sequence Coding Region

209487..209585,209958..210470,210734..211009,211741..211937,212026..212167
,212347..212625,212704..212776,213095..213143,213934..214198
,214341..214396,214542..214610,214793..214904,215447..215536
,215720..215890,216215..216307

Genome Context

<gbrowseImage1> name=IndicaChromosome05:209487..216307 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:209487..216307 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGATCCAACACTCCACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCCTCCCAGTCTCCTCCCCGCTCACCAAGCTGCTCCTCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCCTCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCTCGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTGAGTCCTCCAGGCCACCCAGGGTGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCGTCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCTTTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACTCCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAAGGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAGTTGTGATTGCTACGGCTTATAAGGTATTTTGCTACCGTAAAGTATCAGCGGTAGAACAGATCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCGAGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCTTGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTATGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGGTGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTGATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAGTTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAATCAGAAATATTATCAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGATGGAAGGGGTTGATACTCTTCTGATGTATCTTTATAGAGCTCTCAATCTTGTTGATGACATGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGAGGAACTAGAATCACTTTTGGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGGAAATTGCTGCCGTTGAAGCCTCCAAGATACTTCAAGCATCATCTGATCAGGACCTTGTTCTGGAGCATCTTGGATGGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACATCTGAAATGAGGGAAAAACAGCTTTCTCCTGAAAAGGTTGTTGCTGCCATTGATCCAGAGAAGGTTGGCATTCACCAAAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGCTATTTTGTATAGGAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGAAACTGGAGGATAGTGAAGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGCTGTTGGATTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGAGATTATCTGCTGATATGCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATCGTCAAGGGCAGATAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACAGGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAA</cdnaseq>

Protein Sequence

<aaseq>MGSNTPPSRAALEPFATLDPAALAGLPVSSPLTKLLLVDLTLHDADELEVRTRDIALVDGVKALAWVGDSVFVGTASGYSLFSTTNAQGGDIFTLPESSRPPRVKPLSGGDEVMLLVDNVGVVVDRSGHPVGSSFVFNTTPDCIAEVYPYVVVAGDSKVDVYRRKNGAHLQAIPFARPGTGGLIVASEDAGIGSDVVVIATAYKVFCYRKVSAVEQIKALLRRKSYAEAISLLQEFEADGEISNDMISFVHAQLGFLLFFDLRFEDAVNHFLLSETMQPAEIFPFIMRDPNRWSDLVPRKRYWGLHAPPKPLEEVIDDGLVTLQQALFLKKAGVDTVVDDDFLSNPPSRADLLEVAIRNIIRYLCASREKDLSSSEMEGVDTLLMYLYRALNLVDDMEKLASSQNSCVVEELESLLDDSGHLRTLAFLYGSKGMCSKSLGIWRILARNYSTGLWKDHAILPETDSLETSVGKMSGEEIAAVEASKILQASSDQDLVLEHLGWVADIDQELATAILTSEMREKQLSPEKVVAAIDPEKVGIHQRYLQWLIEEQECDEPHYHTSYALSLSRSAMDAVRLGSNNEERNNKEFDSDMQFIYLLRERLQFFLQSSDLYDPEEVLYVISESELWLEKAILYRKMGQENIVLQILALKLEDSEAAEQYCAEIGRDDAYIQLLDLYLDPKNGKGPMFTAAVRLLHNHGESLDPIQVLERLSADMPLQLASDTILRMLRARVHHHRQGQIVHNLSRATNLDARLTRLEERSRHVQLTDESICDSCRARLGTKLFVMYPDDSVVCYRCYRNQGDSASPHGRNFRKGGIFKQSWLVSR</aaseq>

Gene Sequence

<dnaseqindica>1..99#472..984#1248..1523#2255..2451#2540..2681#2861..3139#3218..3290#3609..3657#4448..4712#4855..4910#5056..5124#5307..5418#5961..6050#6234..6404#6729..6821#ATGGGATCCAACACTCCACCCTCCCGCGCCGCCCTCGAGCCCTTCGCCACCCTCGACCCCGCCGCCCTCGCCGGCCTCCCAGTCTCCTCCCCGCTCACCGTCCGCTCCGCCGCCATCTCCTCCCCATACCTCTACCTCGGCACCGGCGGCGGCAAGCTCCTCCTCTTCACCCTCGATTCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTCCCCCTCACCGCCATCGCCCGCGTCCTCCTCCTCGCCGACGGCCTCCTCCTCCTCGCCGACCCCCTCCTCTCCCGCCCCGTCCGCCGCCTCGGCTCCGTCCGCAACGTTGCCGCCGTCGCCGCCCGCGCCTCCGAATCCGACGATGATCGCCCCTCCTGCTCCCTCGCGGTCTCCGTCGGGAAGAAGCTGCTCCTCGTTGACCTCACCCTACACGACGCCGACGAGTTGGAGGTGCGGACGCGTGACATCGCCCTCGTCGATGGCGTCAAGGCGCTCGCTTGGGTCGGGGACTCCGTCTTCGTCGGCACTGCCTCGGGCTACTCGCTCTTCTCCACCACGAACGCCCAAGGTGGCGATATATTCACGCTCCCTGAGTCCTCCAGGCCACCCAGGGTGAAGCCCCTGTCCGGGGGCGACGAGGTCATGCTGCTCGTCGACAATGTCGGGGTCGTCGTGGACCGATCGGGGCATCCCGTTGGAAGCAGCTTCGTCTTTAACACCACGCCGGATTGTATAGCGGAGGTGTACCCCTATGTTGTTGTTGCCGGGGACTCCAAGGTAGATGTCTACAGAAGAAAGAACGGCGCACATTTGCAGGCTATTCCTTTTGCAAGGCCTGGTACAGGTGGACTAATTGTAGCGAGCGAGGATGCCGGAATTGGCAGCGACGTAGTTGTGATTGCTACGGCTTATAAGGTAACGTAGGTATGTCAACTCATCCATCGGTGCAACTTGACTCAAAATTTCCAATCTGCTCTACAGGATTGCTTAGCTACTGAGCTGCGTTCTGTGTTTGTTAGTAATACTCAATAATTACAATTTCCAATGACAAGACAATGATTTTGTATGCTCAAGTGAAACCCTGACAATGGATTCTCTCATAAATGTGCAGCGCCATTTTATCATGTCGATTTTGTATCACACACTGTACTTATGGACACATTTATTGGCTTGGCCAGGTATTTTGCTACCGTAAAGTATCAGCGGTAGAACAGATCAAGGCACTACTACGAAGAAAGAGTTATGCAGAAGCTATTTCTTTGTTACAAGAGTTCGAGGCCGATGGGGAAATCTCAAATGACATGATTTCCTTTGTGCATGCACAACTTGGATTCTTGTTGTTTTTCGACTTGCGTTTCGAGGATGCTGTAAATCATTTCTTGCTCTCGGAAACTATGCAACCAGCAGAAATATTTCCATTCATCATGCGGGACCCTAATCGTTGGTCAGATCTGGTATGCCTCATTACCACATGTTAATTGTAATGCTGTATCTCCTCGTTGATTTCTATAAGGCATATTTTGATTTAAAAAGTCAAACGTTGTAGATTTTGACCAAAAACTAGACAAGTTACAAATACCAGTTCAAAATGTTTTCACACAATTTTGGTTCTATTTAGAATATATTTTATGACAAAAAAAATCCATGCTCAAGGTTTAACACTGCAGACTCTTTGAAATCAAAATACGCCTTGTAAAATCCACTGGCCACTGGGTATAAATAAGACAACTGTTTTAACACATTCCTTGTTTTATGTTTTATCCTGTAATGTGCTCGAGGAGCTGACTAACTGCACAACCTTTCTCATGATACTCTCTTAACCTTTTCTTCTGTATGTGAAAAGTTCATGTTGAATGCTGCAACTTCTTTTATCTCTTTAATGTGGTTTTCAATGGATAAGACTTTATTAATTTCTTGATATATGAACCCGTTCCTCTTGAGTATCAACATGAGCTGGTTCCTTCAAATTTGAGCGTAAAGCTTATATTGGTAGGCACATCTGTTAAGTTTTGATCTGCTAGATTAATTTGTCAACATATTTTTGTAATTGTCAAATGGAATCTGTAGTTTTCATCACCTAACATACTGATTAAGTTCTCAAGACAAACTGCTCATCTTCCACTATGACTGGCTGCCTTTTGTATTCAGCAGTTTTTTATCTGATTGTGAACTTTGTAAATTTTAGGTGCCAAGAAAGCGTTATTGGGGCTTGCATGCTCCCCCAAAGCCTCTTGAAGAAGTTATTGATGATGGGCTAGTAACACTTCAACAGGCATTGTTTCTCAAAAAGGCAGGTGTGGACACAGTTGTGGATGATGATTTCCTTTCAAATCCACCAAGCAGAGCTGATCTGCTGGAAGTAGCAATCAGAAATATTATCAGGTTTGCTCATTCACGACATTTTTTATTCATTACGAATTGCAAATAAGCTGCTCCATCCAGCTGATGTCTGAATGCTATATGAAACTAGGTACCTGTGTGCATCCCGAGAGAAGGATTTATCTTCTTCAGAGATGGAAGGGGTTGATACTCTTCTGATGTATCTTTATAGAGCTCTCAATCTTGTTGATGACATGGAGAAGCTTGCATCATCTCAGAATAGCTGTGTTGTGGTATGTAAATCCTTTAAACATCTGCAACCTTGAAGCGTTTAAGACTGTTACACACCTACGATACTTAAATCGACATTAACTCTTCATTTGAGAACAGTACATAACTACATATAGTTCAGTGATATTCTTATGTGTTCAAATTAAAAAAAAGATACAATAAAAATACTATGGTGGTGCAGGAGGAACTAGAATCACTTTTGGATGACTCTGGACATCTGCGGACGCTTGCATTCTTATATGGCAGTAAAGGAATGTGCTCCAAATCCCTTGGTATCTGGCGTATCTTAGCAAGGAATTACAGCACTGGTTTGTGGAAGGATCATGCAATCCTACCTGAAACTGACTCTCTTGAAACTTCTGTTGGTAAAATGTCTGGTGAGGAAATTGCTGCCGTTGAAGCCTCCAAGATACTTCAAGCATCATCTGATCAGGACCTTGTTCTGGAGCATCTTGGATGGGTATTTACTTCACACTAAGGACTTCATGATCAATGATCTGTTCCACTTTGTGTACTTCTACTGACTATTTGCGTTTAGGTGGCAGACATTGATCAAGAGCTTGCAACTGCAATTTTAACATCTGAAATGAGGGAAAAACAGCTTTCTCCTGGTAATTGCTTTGTTTTAGATAAACCACTATACCAGTGTGCCTTTTATGGCTTATCCATGGCAGATCAACACAATTTCCAGTTTTTTTTTCTCCTTTTGACTTATGAATGTGTATATAACATAGTGTGGATGGTAGTAGGCATATGTAATCATGGATCGATGGGCTCTCTTTCTCCTATTTTAGAACTAACAATATTTTCACTATATCAGCCTATATTGCATCCAGAAAATTGTGTTTGCTACTTAGGGCTGCTAGGAAACTTTTTTGGGTGTAACTAACATGCGTTAACATTTATTCTGGATGATTGTTATTCTACAGAAAAGGTTGTTGCTGCCATTGATCCAGAGAAGGTTGGCATTCACCAAAGGTACATATAATGAATCGACAAAATCATTACAAGTTAGAACTCAAGATTCCATGATGATCCTCCAATGTTCCTTGTTAAAAAAAATGTTAAATAGTAACAGAGTGAATTATGGGTATACGTTGTGCAAGTTTGTTCATTATACAATTGCATGATCATAAACAATGAACTAATAGCAGTTTGTCAGGCTTCTTACTAATTACTTGGTATCTTGGGATCCATCACCACTGTAGAGTGACCTGAACATTGATACGATTGATTGATAATCTTGTCTTTCCATGCCAGATTATTCGAGTAAATGCTGACAATAATAGTTGTAACCAAGGGGGGCCTGTTTGGATCAATTCCATTCCTAGTGTTACCAATTTTTTTGGGCAATGACAAGATTTGTCTATTGCCAAAAATTTTGGCAAGAATGAGTGGGTTCTAATTTGTATGGGCATAAGAGTGATGCCAAATAATTTGGCAATGGCAGTTCTTTAGGTTGCAAACCAAATGGGTGACAAATTTCTTGGTGTTGCCAATTATTTGGCATGGTTGAATTGGGGTATAAATCAAACAGGACCTAAGCGTATTCTAAATATATACGAAGGAAACATAATGAGGCTCAATGAAATAACATATTATGACTTGAAGCTACTGTATCATATGCATATTATATTAGGTAGTTCTTAATCAAATATAGTTACCATTTGCATGTTTCTTTGAAAGCTCTATGTGTTCTATGCCTTTTGTACTCTTGCTGAATAAATTCCTCAGCTTTTATGAAATCTGAATATGCTAAGTTTTGCAGATATTTGCAATGGTTGATTGAGGAACAGGAATGTGATGAGCCTCACTATCACACGTCATATGCATTGTCCCTCTCCAGATCTGCCATGGACGCAGTCCGTTTGGGATCCAACAATGAAGAGAGAAACAATAAAGAATTTGATTCTGATATGCAGTTCATTTATCTATTGAGGGAAAGGTTGCAATTTTTTTTGCAATCGTCAGATTTGTATGACCCAGAAGAAGTGCTATATGTGATTTCAGAATCTGAGCTATGGCTGGAAAAGGTGATTATACAATTTATTTCTTCCTTCTCGCGTTCCATGCCAGCTCATTTTGTGTCCTACCCATTGAAATTTATGCTTGCTTGATAGTCCTCATCGCTTATATCTGACATATTTGACATAAAAATCTCTTTCCTTCTGGCAGGCTATTTTGTATAGGAAGATGGGCCAAGAGAACATTGTACTTCAGATATTAGCGCTGTAAGATCCTGTGCTGCATTTATTTTTTATTGGTTTGTTGTTACTTGTAAATTTCAGCAGTAATGTTTTGTTTAACTGGACTTGTACACCCCTACAAGTTCTGTTCCCTAACTTTCTTGTTGGTTCTTCTTCATTTATGATGAAGGAAACTGGAGGATAGTGAAGCTGCTGAGCAGTACTGTGCAGAGATTGGTCGAGATGATGCCTATATTCAGTATGTTATTACCTCACTTCAGTATTTATTACATGGTGGCTTGTTAGTATTCTTGGTACATTCTCTATGTTTTGATTTGATTTTAGCTTTTCTATGTTGACTTATTAGTATTACTAGCATAATTTCATGCATCATGACCTTGGTCCTTAGTTCATATTCTCTACATCTTCCTGTGAACTCAGGCTGTTGGATTTGTATCTGGACCCCAAAAATGGGAAAGGACCCATGTTTACAGCAGCCGTTCGACTTCTCCATAACCATGGGGAATCATTGGATCCAATACAAGTGTTGGAGGTACCACTTTCTTACAGAAGTATGATCAGAACCTATTTGATGATATTAATTTGTTATTTGTGATGTGCATGCTAGTTAACATGGGGGCTAGTGTTTCTAGCCCTTGGTAATTTATGATCATGGGGAGTGAGTCTAGAAAAGCAATTTGTGTTGTCCCAGAAAAAATGAGTGTGCACTTGTTCCTTCAGAACAGGATTCCGAACCATCAAATGCTCATTGCCTGAATGTTGTATTTAGTATTTATTACCTTTTTGGGTTCCTGATATTCCTTAATCATCCTGGTCTATAGAGGTCTGCTGTGATCCTTCTCTTTAGGAGTTGATATATAACAAAAGGTAAATGAGATGTCCTGTTTGTTAATCTCTGTGTATTGGTCTTTGAAAGAAATAAAGAATACATGGATAATAGAAAACTGGTGTAGGGGCATCCCACCGTGTTCTTTTATGTTTATATTATCGCTGCTATTGGTATGATCATCCTATTTTGTGCTACTTTTATTAGAACAAGAATTCTGAAGCCTGAGCTATAATTATTTTTGCCAGAGATTATCTGCTGATATGCCTCTTCAGCTAGCATCAGATACAATTTTGCGAATGCTGAGAGCCCGGGTGCACCATCATCGTCAAGGGCAGGTAAACATAATCATTTCCTGTTTTTCAGCCAATGTCTTCTATTGAAATGTGACTGTTTGAGGAACTATTCTGCCTCTGCACTGTTAATATTTCTCTTGAACTCAAACTTGCTCCCAGGTTGGTCTTATCTTTTATGTGAAGTTTGACTTACCATTTTCTCTTTCGCTCTATGCCTATTGATAGATAGTTCATAATTTATCACGCGCAACGAACCTTGATGCACGGTTGACCAGATTAGAGGAGAGGTCAAGGCATGTGCAGCTAACTGACGAGAGCATATGTGATTCATGTCGAGCTCGCCTTGGCACCAAGCTGTTTGTCATGTACCCAGATGACTCAGTTGTATGCTACAGGGTATGTCAACTCAAAACGATTTTGCTGTTTGGTTTGCTATTTACTTCTTTGAATGAAAACGTGATTGGTTGTTAGATGCATACTCTGGATTATTATCCGATAATGCATTGCAGGTGAATTCTCTCGTACAAAAGCAGCATTATCAAATTAGCTGTGCTTAGCAACTTGGATATTGGACATCTATGGTTTACTTGGATTGCCTAACCCTTTGAGAAATGAGCTGGAACTGCTTGTGCTATTATTTTTTTTCTAGCAGCTGCTTTTGTTTTTTAAAAAAACCATGCGCATAAAGTCGTCTAAACATTTTAACATTGTGTTTTTCAGTGCTACCGAAATCAAGGTGATTCTGCATCTCCACATGGACGCAACTTCAGGAAAGGTGGTATATTTAAACAAAGCTGGCTCGTTAGTAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019005