BGIOSGA019007
| Gene Name |
BGIOSGA019007 |
|---|---|
| Description |
Polygalacturonase inhibiting protein 1 |
| Definition |
Oryza sativa Indica Group BGIOSGA019007, complete gene. |
| LocusTag |
PGIP1 |
| Ensembl Transcript ID |
BGIOSGA019007-TA |
| Ensembl Protein ID |
BGIOSGA019007-PA |
| Length |
921 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 5:220428..221348 |
| Sequence Coding Region |
220428..221348 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome05:220428..221348 source=RiceIndica05 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome05:220428..221348 source=RiceIndica05 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGTCGTCGTTCTTGTGCTCGCCGCGGCCGGCGCCGCCGCTGCCACCACGAAGAAGAAGGAGTGCAACGCCGGCGACAAGGCCGCACTGCTGGCCATCAAGAAGGCCCTCGGCGACCCCTACCACTTCGCCTCCTGGACGCCCGACAACCTCTGCTGCGAATGGTACGACGTCACCTGCGACGACACCACCGACCGCGTCGTCGGCCTCTCCGTCTTCCAGGACGCCAACCTCACCGGCACCATCCCCGACGCCGTCGCCGGCCTCACCCACCTCCGCACCCTCACGTGGCACCACCTCCCCCAGATCTCCGGCCCCATCCCGCCGGCGATCGCCAAGCTCAACCGCCTCTCCCTCCTCATCATCTCCTGGACCGCCGTCTCCGGCCCCGTCCCCTCCTTCCTCGGCGGGCTCAAGAGCCTCACCCTCCTCGATCTCTCCTTCAACTCCCTCACCGGCGCCATCCCGCCGTCGCTCGCCGCCCTCCCCTTCCTCAGCGGCATCGACATCAGCCGCAACCGCCTCACCGGCCCCCTGCCGCCGGCGCTCTTCAGCAAGCTCAACACCACGCAGCAGGGCGGCGCCTACCTGAGGCTGTCGCGGAACAACCTCACCGGCGGCATCCCGGCCGAGTACGGCGGCGTGGCGTTCGAGGTGATGGACCTGTCGCGCAACGCGCTGAGCTTCGACATGACCGGGCTGCGGCTGCAGGAAGGGGTGAGCTCGCTGGACCTCAGCCACAACATGCTGTACGGCGGCGTGCCGGCGCAGGTGGCCGGGCTGAGCAGCCTGCAGGACTTCAACGTCAGCTACAACCGCCTCTGCGGCGAGCTGCCCGCCGGCGCCGCGAGGTTCGATCAGTACTCCTTCTTCCACAACAAGTGCCTCTGCGGACCGCCGCTCCCTACTCCCTGCAATTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MVVVLVLAAAGAAAATTKKKECNAGDKAALLAIKKALGDPYHFASWTPDNLCCEWYDVTCDDTTDRVVGLSVFQDANLTGTIPDAVAGLTHLRTLTWHHLPQISGPIPPAIAKLNRLSLLIISWTAVSGPVPSFLGGLKSLTLLDLSFNSLTGAIPPSLAALPFLSGIDISRNRLTGPLPPALFSKLNTTQQGGAYLRLSRNNLTGGIPAEYGGVAFEVMDLSRNALSFDMTGLRLQEGVSSLDLSHNMLYGGVPAQVAGLSSLQDFNVSYNRLCGELPAGAARFDQYSFFHNKCLCGPPLPTPCN</aaseq> |
| Gene Sequence |
<dnaseqindica>1..921#ATGGTCGTCGTTCTTGTGCTCGCCGCGGCCGGCGCCGCCGCTGCCACCACGAAGAAGAAGGAGTGCAACGCCGGCGACAAGGCCGCACTGCTGGCCATCAAGAAGGCCCTCGGCGACCCCTACCACTTCGCCTCCTGGACGCCCGACAACCTCTGCTGCGAATGGTACGACGTCACCTGCGACGACACCACCGACCGCGTCGTCGGCCTCTCCGTCTTCCAGGACGCCAACCTCACCGGCACCATCCCCGACGCCGTCGCCGGCCTCACCCACCTCCGCACCCTCACGTGGCACCACCTCCCCCAGATCTCCGGCCCCATCCCGCCGGCGATCGCCAAGCTCAACCGCCTCTCCCTCCTCATCATCTCCTGGACCGCCGTCTCCGGCCCCGTCCCCTCCTTCCTCGGCGGGCTCAAGAGCCTCACCCTCCTCGATCTCTCCTTCAACTCCCTCACCGGCGCCATCCCGCCGTCGCTCGCCGCCCTCCCCTTCCTCAGCGGCATCGACATCAGCCGCAACCGCCTCACCGGCCCCCTGCCGCCGGCGCTCTTCAGCAAGCTCAACACCACGCAGCAGGGCGGCGCCTACCTGAGGCTGTCGCGGAACAACCTCACCGGCGGCATCCCGGCCGAGTACGGCGGCGTGGCGTTCGAGGTGATGGACCTGTCGCGCAACGCGCTGAGCTTCGACATGACCGGGCTGCGGCTGCAGGAAGGGGTGAGCTCGCTGGACCTCAGCCACAACATGCTGTACGGCGGCGTGCCGGCGCAGGTGGCCGGGCTGAGCAGCCTGCAGGACTTCAACGTCAGCTACAACCGCCTCTGCGGCGAGCTGCCCGCCGGCGCCGCGAGGTTCGATCAGTACTCCTTCTTCCACAACAAGTGCCTCTGCGGACCGCCGCTCCCTACTCCCTGCAATTAA</dnaseqindica> |
| External Link(s) |
