BGIOSGA019012

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Revision as of 02:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019012| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019012, complete gene.| tag = P0668H1...")
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Gene Name

BGIOSGA019012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019012, complete gene.

LocusTag

P0668H12.22

Ensembl Transcript ID

BGIOSGA019012-TA

Ensembl Protein ID

BGIOSGA019012-PA

Length

5451

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:284190..289640

Sequence Coding Region

284190..284490,284960..285130,285873..285919,286375..286521,286604..286678
,286935..287044,287141..287268,287477..287538,287708..287857
,287936..287970,288192..288260,288647..288738,288827..288903
,289311..289388,289542..289640

Genome Context

<gbrowseImage1> name=IndicaChromosome05:284190..289640 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:284190..289640 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGTCGCCTTCCGCTTGGGACAGCGCGTGCACGCCGCCGGCGACCCCGCCCGCGTCGGCACCGTGCGTTACCTCGGCCCTGTCGACGGCCACCCCGGAGACTGGCTGGGCGTCGACTGGGACGCCGGCGCCGGCGGCCGCCATGACGGGTCGCTCGCCGGCCGCCGCTACTTCGTTGCCGCCGGGGAACGCTCCGCCTCCTTCGCGCGCCCCACCGCGCTCAGCTCCGGGATCACGCTCCCCGACGCCATACGCAACCGCTACCGTGTCGAGGAATTCACCAAGGAGGAACAAGATGAAATGTATGTCTTCTCAACAAGTCAGAAGCGCGTGTCAGTGGAATTGGTTGGCAAGAACAAAGTTGAGGAAAAGCTGAAAAACCTCAATGATCTGACCAGTGCATCTGTATCCTACATGGGAGTAAGCTCAATTGGGCCAGGAGATGAACTAAAGAATTTGGTTCCAAATCTCAGACAGCTTGATTTAACTGGAAATCTTCTCTCTCAGTGGCAAGATATATTCTCTCTGTGTGAAGCTCTGGCATCACTGGAAATTCTTGATTTGACAAACAATACCATGGAGAATGACTTTACTGACAGTTCATCTGTCAAGAATATCCGTGTTTTGGTTCTCAACTACTGTGGTGTAACATGGGAACTGGTTGAAAAGATTAAAGTCTCATTTTCATGTCTCAGTGAACTCCATCTAATGACGAACAGGATAAAAGCAATGATGACTCCAGTTGGAAATATTGTTCAAGGTTTCGATACACTGCGACTCTTAAATTTAGAAGACAATCACATTGATTCATGGGATGAAATTGTGAAACTATCTTACTTAAGAAGCTTGGAACAGCTCCATTTGAATAAGAACATGCTAAAACATGTAACATATCCATCCAATCCTCCTCCACTAGGATCTCTTGGCGATGCAGCTGTTTTGCCTTTTGAAAAACTACGAGTTCTTCTCTTAGGATCTAACCAGATAGATGAGGTCCTTTCTGTGGATTCACTTAACCTCTTTCCGAGTTTAACATTATGGCTTAGCACGCCAATACTAATATCTACTTTTCTAAAGGATGTCAGGCTTTCTGATAATCCTGTAGCTGACCCTGCCAAGGGCGGCGTGCCTCGATTTGTGCTTATCGCCCGACTAGGAAAAGTTAAAATACTGAATGGTAGTGAGATAAGTCCACGTGAGCGAAGGGAAGCAGAGATACGATATGTTCGCCTTGTTATGGGAAAAGCTGACTCATATGATCCTGAAGAGATCAAACGGCTGCACCCTAGATTTGCTGAGCTGAAAGCCTTTCATGGTATTGAGGATGAGAAGCCGAGTTCAAGGACTTCTGGTCCTCAAAAAATGGCTTCTGGGCTTATAAGTATCACCTTGAAATGCGTAGGGCCATCTATGGGTGAGAAGCAATCATTGACAAAGAAGCTGCCTCCTGCAACTACTGTTGGAAAGTTAAAATCTTTGTGCGAGAGCTTCTTTAAACTGAAGGACGTTAAACTGAGACTGTATCTTGAGGAAGAGGGTTGCCCTATGCCGCAATTCTTCGAGGAAGACACGGTTTCTCTCATGGAGCTTGGGATCGGCACGGGATCGACCATCATCGTGGACGAAGAAAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAVAFRLGQRVHAAGDPARVGTVRYLGPVDGHPGDWLGVDWDAGAGGRHDGSLAGRRYFVAAGERSASFARPTALSSGITLPDAIRNRYRVEEFTKEEQDEMYVFSTSQKRVSVELVGKNKVEEKLKNLNDLTSASVSYMGVSSIGPGDELKNLVPNLRQLDLTGNLLSQWQDIFSLCEALASLEILDLTNNTMENDFTDSSSVKNIRVLVLNYCGVTWELVEKIKVSFSCLSELHLMTNRIKAMMTPVGNIVQGFDTLRLLNLEDNHIDSWDEIVKLSYLRSLEQLHLNKNMLKHVTYPSNPPPLGSLGDAAVLPFEKLRVLLLGSNQIDEVLSVDSLNLFPSLTLWLSTPILISTFLKDVRLSDNPVADPAKGGVPRFVLIARLGKVKILNGSEISPRERREAEIRYVRLVMGKADSYDPEEIKRLHPRFAELKAFHGIEDEKPSSRTSGPQKMASGLISITLKCVGPSMGEKQSLTKKLPPATTVGKLKSLCESFFKLKDVKLRLYLEEEGCPMPQFFEEDTVSLMELGIGTGSTIIVDEES</aaseq>

Gene Sequence

<dnaseqindica>1..301#771..941#1684..1730#2186..2332#2415..2489#2746..2855#2952..3079#3288..3349#3519..3668#3747..3781#4003..4071#4458..4549#4638..4714#5122..5199#5353..5451#ATGGCCGCCGTCGCCTTCCGCTTGGGACAGCGCGTGCACGCCGCCGGCGACCCCGCCCGCGTCGGCACCGTGCGTTACCTCGGCCCTGTCGACGGCCACCCCGGAGACTGGCTGGGCGTCGACTGGGACGCCGGCGCCGGCGGCCGCCATGACGGGTCGCTCGCCGGCCGCCGCTACTTCGTTGCCGCCGGGGAACGCTCCGCCTCCTTCGCGCGCCCCACCGCGCTCAGCTCCGGGATCACGCTCCCCGACGCCATACGCAACCGCTACCGTGTCGAGGAATTCACCAAGGAGGAACAAGGTCCGCATCCCTCGATTCCTCGGCTTCCAAATCCAAATCTTGCTGCTCTTCATTCCACCAGCTAGCTTCTTTTTCTTTTTTTTCCCATTCCACTTATTAATTTTTTGCTAAAATTCATCCTAGTACATACTTTCTACCTTCTATGCGTTGTAAATAGCATTCGAGAAATCGGCTACACATTTTTTTTGTTGCATTATACAACTTAGGCTCAAGCATCCATGTTGGAATGTGTATATGTACTAGTTCTTGAATTTGACAGTTGCTCATTGCTTGAGAGCATGTATGGAACACCTCGTGTTAAAATTTCAAAATCATGTGCTATTGGTGGGTTGGCGTAAGATTTTCCAGCTACTCTGTTTTCTTTTCCCTGTTTCAAGGGCAGAAGATTTTCCGTTGCTTGTAAAAGCAATATGCATACACCTTTTTACATTTATAATGATACCCGATATAAACATTTTGTTGTGTCCAGATGAAATGTATGTCTTCTCAACAAGTCAGAAGCGCGTGTCAGTGGAATTGGTTGGCAAGAACAAAGTTGAGGAAAAGCTGAAAAACCTCAATGATCTGACCAGTGCATCTGTATCCTACATGGGAGTAAGCTCAATTGGGCCAGGAGATGAACTAAAGAATTTGGTTCCAAGTACTTACTATCCTTTAATCCTTAAATCATCTCTTTTATTTGATTGTTTTGCAACCCAGCGATACATGTCAAGCTTCCTGATCTTATATATTGGAAACGTTACCTTCCTTAGAGGGAACACAATGTATATATTTTGTTTGGTTCACTGGAGGCTCTGCAGCTAAAGCATTTAGTTCACTGCATATTTTGGCATTGGAAATGAGATAATGGAATAGAGTATATAGTTTCTTAACGTATGCAAAATTAAAAGGGTGGTAACCTAAAGTACTTCGTATTTGTGTCACTTTTTATTCTTTTGAGTGTAAATTTGAGACTCGATGTACTGACCGACTGTAACAACGTCGGCATCTACAATAACTGAGTTGAAATACCTTTTAGCTGCATTTTCTTATTAAAGTTTCCTTTAGCAAACTAAATATGTGTTCACCCCACAGCTGGGTCATTTTCAACTACAATATTCTCATATTTCCTATAAAGATGACATTATGTATTGGCTCACCTCTAGCATCTAGGTTCTGGGTTAAGACTAGTCCCTTAGGACCTAATTCAGTTGTATCACCATTACATAATCTATTTGAAAATGGCATGAATTCTCTTAGGCCATTAGTAGGCACTGAGCATTGGAGGGATGATTTTACTAGTAAACATTCATTAGAAATTTGCTGGCAGGACTGTCATGCATACTTGGCCTATGTTTATCCTGAATTCTGATGAGTACTGACAATAGTTTTGCTCGTTTCAGATCTCAGACAGCTTGATTTAACTGGAAATCTTCTCTCTCAGTGGCAAGTATGTACCTCAAGAGACTAACATTATGGTTAGCACAATTTTTAATTAGTATGGATATAACATACAAAACTTCATAAATTGAAACATGCACAGCAAAAGGCTGTATGCTCTTCATTACAATGGTGCCACATTGTGCTGTTGAACTTCATTACTCATAAGCTTGGAGTTTATTCAAATTTATGTTGTTTTGACCTAGAAGTAAAACTTGTGGTATATCCCTGTATTGGATTATTAATACTTTTCATGTGCGTTGGTAAGCTATGTAATCATCACCAACCATCTTATCTTTTTCACCTCTGTTGAAAGCACATTTAGCATCTTTTACTCACTTGACAGTACAGGTCACGATTTGCTTGATATCCTGAACTTTCAATTGTTTTGTTATGTTTTCTCACAATTGATGCTAATGTTATGTTTCTTTTGGCATTTGGCTGAACAGTTTTGTTCTTTCACAGGATATATTCTCTCTGTGTGAAGCTCTGGCATCACTGGAAATTCTTGATTTGACAAACAATACCATGGAGAATGACTTTACTGACAGTTCATCTGTCAAGAATATCCGTGTTTTGGTTCTCAACTACTGTGGTGTAACATGGGAACTGGTATGCCCCTTGGCTGACACAATGAAGCTTCTATTTATTGATGCCAATCACAGTATAAGTTGATGTTTATTTATGTGAACAGGTTGAAAAGATTAAAGTCTCATTTTCATGTCTCAGTGAACTCCATCTAATGACGAACAGGATAAAAGCAATGATGGTTAGCGTTTCTTCTTGTACATTTTTTTGCCATGCATTTTATGCCTACTGCTTCATTTACTGTTATTCATCCAAAGTAAAACAGAAACTCCTCATAAAAGTTTTCCCCTGGCTAACTGGAAAATGATCCATTTGGAAATTTGAATAGGTAGTCCTTCCAAATCTTGCAGTGCAAGGTTTTCCTTCTTCAACTTTGTGTACATTAAGAAACAGCTTTGAAGAACTAACTATAAACTATCATGTGTCCGCTTATCTAGACTCCAGTTGGAAATATTGTTCAAGGTTTCGATACACTGCGACTCTTAAATTTAGAAGACAATCACATTGATTCATGGGATGAAATTGTGAAACTATCTTACTTAAGAAGGTACAAATGTATAACTGAAGCTTTTGTCTTAAGTTAATGTTACTTCTGCATTTCAGAACTGTAGATATTGATGTTTTTCCTTCTTTTTTGGGGCAGCTTGGAACAGCTCCATTTGAATAAGAACATGCTAAAACATGTAACATATCCATCCAATCCTCCTCCACTAGGATCTCTTGGCGATGCAGCTGTTTTGCCTTTTGAAAAACTACGAGTTCTTCTCTTAGGTATTTTTTGTGATCTGGCTTCCCTTATCTATTCCATAACAAAATATCGAATCTAAGATATTTTCTGTAATATCTGGCTTCCGTTATCTATTTGGGAAAATTGATCATGCGCCATGAAATGTTTTCCATAATATTTTCTGTTTAAGAACTGCCTTTAATTCAAGTAAGTTCAAAATGACTTGCTAATGATCACTTTCAAATGCCTCAGGATCTAACCAGATAGATGAGGTCCTTTCTGTGGATTCACTTAACCTCTTTCCGAGTTTAACAGTAAGCAAGTTTCTTTCTAATGGTTTGTGTTTATTATTCTGAAATTTAGTATTGATGTTCAATTCCTTTTCTATGAGGTTTGAACAGTTAGAACTGCAAGATTTTGATACACTGCGATTCTTAGATTTACAAGAATGTTATGATGTACACCACACTGTATTTTTATTAGTTATGGCTTAGCACGCCAATACTAATATCTACTTTTCTAAAGGATGTCAGGCTTTCTGATAATCCTGTAGCTGACCCTGCCAAGGGCGGCGTGCCTCGATTTGTGCTTATCGCCCGACTAGGAAAAGTTAAAATACTGAATGGTAGTGAGGTATGTTGAGTCCCTGGATGTTTCTTGAGCATGTATGTTGTACAAATATGTTACTTCATCTTTCTTTTCCATATCCAGATAAGTCCACGTGAGCGAAGGGAAGCAGAGATACGGTCAGTTAATCCCTTCTGTAAATTTATTACCTTCTTTTATGATGTATAGGGCCTCTGTATATGGCTAGCCATCCATTATTTACATGTGTGTTTATCCATGCCAACGGTGAATTTTTCTTCTGGTTTTCTAGAAAGTGTTTTTGCACTTATCTATATTGTCTTGCTTTTCTCGAAGGAATACCACAATTACGATATCTGATACTTTTGATGCAAAAACATAGATATGTTCGCCTTGTTATGGGAAAAGCTGACTCATATGATCCTGAAGAGATCAAACGGCTGCACCCTAGGTAAGGTTGTCCAATTTCCCTTCTTTACTTTTTGACACCACATGACCATGATATAACCAAAGGATTTTTCACTACATATGCCATTATTTTGCTGCAAAGGACACATGTTGTTACTTAAATGATTTCACCACATGAGCTGTGACCTTACTAACTAGAAAAGCTCTACCTAGTCAATTCCAGCCTATATGATCTCAGTTATACCTGTTATTCAACAATTAGGATTATATGTCTATCTTGATGTTTACACGCGCTTCCAAATTTGTGTTGCTTGGCTTCATTTGCTAAATTTAACTTCCCTGGGACTAGGCTGGGACAGATACCTGATGATAGTGACGCACCAATTATTAATTGGATTATGCTTAGGCAATAACGATTTGTCAATGCAGATTTGCTGAGCTGAAAGCCTTTCATGGTATTGAGGATGAGAAGCCGAGTTCAAGGACTTCTGGTCCTCAAAAAATGGCTTCTGGGCTTATAAGTAATAATGTTGAACTATAATTAAGGCAAGAGAGTTGTATGGTATGCATGCGAGGAAGTGATTTTTTCTTTTCCTCCGTTGCACACAGGTATCACCTTGAAATGCGTAGGGCCATCTATGGGTGAGAAGCAATCATTGACAAAGAAGCTGCCTCCTGCAACTACTGTAAGTACTTCTTGGGTCCTATTACTACTTATTAGCTGTCCTTTTTTCGTGTTTGAGTCTTTGAGACCAGCAGATAGAGAAAAACGATTCTCTTTTTTCGTATGCACACTTTCCGAGCTGCTAAACGGTGTGTGCTTTACAAAATTTATTTATAGAAAAGTTGCTTTAAAAAATCATATTAATCAAATTTTCAAGTTTGAAATAATTAATACTCAATTAATCATGTGTTAATGACTCACCTCGTTTGGTGTATCTTTTCAATCTTCTCCTTTCCTTTCCTCTCAAACACAGGTTGGTTATGTTTAGCTTTCACATGCGAGATATTAGTGGCAACTTGCTGACAGTGATATAACATGCTCTCCTGTTTTGCTACGACGGCTAAATTGCCTATGATTTGCATGTTATAGGTTGGAAAGTTAAAATCTTTGTGCGAGAGCTTCTTTAAACTGAAGGACGTTAAACTGAGACTGTATCTTGAGGAAGAGGTATGGATTATTTGTGCTGTGTATGATCATTGCTCATGTATTAAAATGTTGTCGAGAAAGGAAAAAAAAAGAAAAGAAGAGGCAGAAAGCTAGGTAGGGTAAAATACTTGCATGCTGGAACGGCTGGGATCTGATCGATTTGCATTTTGACAGGGTTGCCCTATGCCGCAATTCTTCGAGGAAGACACGGTTTCTCTCATGGAGCTTGGGATCGGCACGGGATCGACCATCATCGTGGACGAAGAAAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019012