Os11g0687200

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0687200| Description = contains InterPro domain(s): IPR002035| Version = NM_001075014.1 GI:115486676 GeneID:4351147| Length = 3609 bp| Def...")
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Gene Name

Os11g0687200

Description

contains InterPro domain(s): IPR002035

Version

NM_001075014.1 GI:115486676 GeneID:4351147

Length

3609 bp

Definition

Oryza sativa Japonica Group Os11g0687200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29684225..29687833

Sequence Coding Region

29684295..29684360,29684782..29685186,29685870..29687126,29687451..29687519

Expression

GEO Profiles:Os11g0687200

Genome Context

<gbrowseImage1> name=NC_008404:29684225..29687833 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29684225..29687833 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtagactccaaaatttgatgcttctatcggcggggttcttctccacgctattgctcgcacaggtgacgagtgctgctgcagggatgacagtgaaagtgagcacaacgcccatcttctccaagatcccacgagctcagacgaacaaggattttcaggtgctactacgcatcgaggcgccgcctccggtggatctcaagggtcgtgtccccatcgaccttgtcgctgtgctcgacgttggtggtggtggaatgagcttggaaccggttaagaaagccatgaagttcgccattcgacagctcagtgatgaagactctatcgccatctttgggccacccatgagccgagaggtcatccctaagtttatgaatattcatggtagccgaaggattgctgagaagaaggtagatgagctggagggccgtcgctttgcccatccagcaaggtctagcttggatgaggccctcaagatgctggaggagcagccggcgagctcttccgtcggccgcgccaagttcatcgtgttggtcaccgacatcacccgattcagctctgacatgccggagttgtccaagtaccccgtgcacgccttcggcctgggcgcctcgcacgacgcggcggcgctgcgcctcgtcgcccagcggtctcagggcacctactccttcctcgacgacgccaacgccgacaaggtcgccgccgcgctcgccctgtgcctcggcgggctcaagtccgtcgccgccgtcggcgcgcgcgtcgtcctcaaggcggcgagcggcagcggcgtgaggatcgacaggatcagctccggtgggtacgcgagctccgtctcccaggtcgacggggcctccggcgagatcgccatcggcgcgctctacgccggcgaggtgaagaccttcgtcgtccacctcgacgtgcccgccgcgcctgagatttcgccgggggagggcgtctgctgcgaccagcagcagctgctcgtcgccagcctcgacggccagctctacaccagtggcggcggcgtcgacgtcatcgacgacgacgcagcagctggtggtggtggtccgatccaagacgtgctcgtcgtggagaggccacccgccgccgtgctgcccaaggtcccctccgccattgtcgtcaaccacatcttccagttcagggtgctggagatggtcgacgccttcatcaacgacgagatcctcctgcgccgcactccggcgacgaccgggaggacgaaggacgtcgacgtcgacgacgaccgggggatgaagctgctggcgaggtgggagaggttcgtgctcgagcaccagttctgggtcggcctcgacctgggctccctcgacggcgagatcaccgcggtggcgaacagcctgcggaagcagcagcacgtcgtcggcggcgtcttgccgtcgtcgtcgatggcggcgtacatattctcgtggatgtccagctacaagatgcagcggccgacggcgatggggtcgccggcgaaggtggtgggcttgttcgtgacgctggaggttcacctcacgctgcaggtggcgatcacggcggagaacggcggcggcggcggcgacggcgagtgcgagtacagctgcgtggagcagctgccgcctgcgccgccgctgctggtggcgtctggacgcgatgacgacagctaccgtttcaacgccgcgtacgagggcgtcatatcgctcgacgacatcaaccaattcatgatcaaaatctaccagggtatggtgaaagcgaacaatttgaagcaatgccatctgatgaatcagcagccgcgtgctgtcgcctga</cdnaseq>

Protein Sequence

<aaseq>MGRLQNLMLLSAGFFSTLLLAQVTSAAAGMTVKVSTTPIFSKIP RAQTNKDFQVLLRIEAPPPVDLKGRVPIDLVAVLDVGGGGMSLEPVKKAMKFAIRQLS DEDSIAIFGPPMSREVIPKFMNIHGSRRIAEKKVDELEGRRFAHPARSSLDEALKMLE EQPASSSVGRAKFIVLVTDITRFSSDMPELSKYPVHAFGLGASHDAAALRLVAQRSQG TYSFLDDANADKVAAALALCLGGLKSVAAVGARVVLKAASGSGVRIDRISSGGYASSV SQVDGASGEIAIGALYAGEVKTFVVHLDVPAAPEISPGEGVCCDQQQLLVASLDGQLY TSGGGVDVIDDDAAAGGGGPIQDVLVVERPPAAVLPKVPSAIVVNHIFQFRVLEMVDA FINDEILLRRTPATTGRTKDVDVDDDRGMKLLARWERFVLEHQFWVGLDLGSLDGEIT AVANSLRKQQHVVGGVLPSSSMAAYIFSWMSSYKMQRPTAMGSPAKVVGLFVTLEVHL TLQVAITAENGGGGGDGECEYSCVEQLPPAPPLLVASGRDDDSYRFNAAYEGVISLDD INQFMIKIYQGMVKANNLKQCHLMNQQPRAVA</aaseq>

Gene Sequence

<dnaseqindica>71..136#558..962#1646..2902#3227..3295#tttgaaagaacatcaaccgaacgcaagaatcacacacaacactcggttaaccatattgcagtagagatcgatgggtagactccaaaatttgatgcttctatcggcggggttcttctccacgctattgctcgcacaggttttaactcctttgttttaacttttacagtatatctttaattttttttcccatatgggtatcgacaggatggtgcacataaacatcaacattatttatatttgttatcttgtgaccgatcaatatatctacttattgaaaagtatacttgtatacaataacgacgactctactttggcattaattaatatctttagttacttgccaatatgtaacaacaaattaatatgtttttttctcaacaacactgagaactaacactcctagattaatgtttagttcttttacagttggtttgtaccaaaattgaagtcgtctttcgaaaattgggtataacactgatagacaaggaaaaaaaaacagtgaaaaacttatctcaaatcattgctgtcacatacacattcatgtatcatgtatgcaggtgacgagtgctgctgcagggatgacagtgaaagtgagcacaacgcccatcttctccaagatcccacgagctcagacgaacaaggattttcaggtgctactacgcatcgaggcgccgcctccggtggatctcaagggtcgtgtccccatcgaccttgtcgctgtgctcgacgttggtggtggtggaatgagcttggaaccggttaagaaagccatgaagttcgccattcgacagctcagtgatgaagactctatcgccatctttgggccacccatgagccgagaggtcatccctaagtttatgaatattcatggtagccgaaggattgctgagaagaaggtagatgagctggagggccgtcgctttgcccatccagcaaggtctagcttggatgaggccctcaaggtatgtgcttttctttggtttgtgtatttctacatcgagttcctgatatatttttagtccttggtctacttgcatactataattaagaagaccacgactatgatatttgatcagctttgttatttattagttgtataatattgtcttatttgtcaatgaataacctaaaagtgcacaagtaatcaatataggaatgtggaaagtatttttaccactgaaatggatatcctcctatatatatatatatatctcatccatttgcatattatctgaacggtcatgaaaatttaataggcaatctgacaatataaatcatagtgtgatatatcattttacaatcatgcaactttaaatttaatctatatgagttaaaattttatcgacatatcgatattatcaattttgttaagatagttcgataactacttggttggcatttcggagataggaaaaaacaaagggagatatccccttaatgagtgaaaaactatctccataaaaacgtaacttcagcataaataattaaatgcaactctacttttcttttaaatttcttgaattactcaagatgtattttcttgcttatgtagataaatattattttcttttcaactgcaaggatcaataccaaagtgctttaaaaaaaacaaaaaaataattcatattgttcgatatggatgcagatgctggaggagcagccggcgagctcttccgtcggccgcgccaagttcatcgtgttggtcaccgacatcacccgattcagctctgacatgccggagttgtccaagtaccccgtgcacgccttcggcctgggcgcctcgcacgacgcggcggcgctgcgcctcgtcgcccagcggtctcagggcacctactccttcctcgacgacgccaacgccgacaaggtcgccgccgcgctcgccctgtgcctcggcgggctcaagtccgtcgccgccgtcggcgcgcgcgtcgtcctcaaggcggcgagcggcagcggcgtgaggatcgacaggatcagctccggtgggtacgcgagctccgtctcccaggtcgacggggcctccggcgagatcgccatcggcgcgctctacgccggcgaggtgaagaccttcgtcgtccacctcgacgtgcccgccgcgcctgagatttcgccgggggagggcgtctgctgcgaccagcagcagctgctcgtcgccagcctcgacggccagctctacaccagtggcggcggcgtcgacgtcatcgacgacgacgcagcagctggtggtggtggtccgatccaagacgtgctcgtcgtggagaggccacccgccgccgtgctgcccaaggtcccctccgccattgtcgtcaaccacatcttccagttcagggtgctggagatggtcgacgccttcatcaacgacgagatcctcctgcgccgcactccggcgacgaccgggaggacgaaggacgtcgacgtcgacgacgaccgggggatgaagctgctggcgaggtgggagaggttcgtgctcgagcaccagttctgggtcggcctcgacctgggctccctcgacggcgagatcaccgcggtggcgaacagcctgcggaagcagcagcacgtcgtcggcggcgtcttgccgtcgtcgtcgatggcggcgtacatattctcgtggatgtccagctacaagatgcagcggccgacggcgatggggtcgccggcgaaggtggtgggcttgttcgtgacgctggaggttcacctcacgctgcaggtggcgatcacggcggagaacggcggcggcggcggcgacggcgagtgcgagtacagctgcgtggagcagctgccgcctgcgccgccgctgctggtggcgtctggacgcgatgacgacagctaccgtttcaacgccgcgtacgagggcgtcatatcgctcgacgacatcaaccaattcatgatcaaaatctaccaggttaacacacgatttcctcaagtgaattttcagtgcttaattattacgagtacaataaaaaatactcccttcatcccaaaatatttgacgccgttgactttttaaaaaatgtttgaccgttcgtcttattcaaaaaatttaagtaattattaattctttttctatcatttgatttattgttaaatatacttttatgtatatatatagttttacatatttcacaaaattttttaaataagacgaacggtcaaacatatttaaaaaagtcaatggtgtcaaatatttagggaaggagggagtatctaataatgatgcatggtgcagggtatggtgaaagcgaacaatttgaagcaatgccatctgatgaatcagcagccgcgtgctgtcgcctgaatctgattaatctctctacgttgttgagtaataatatgcccatccatcgattgatcgatccctgaataatgcgtggtagctgcagttgccttatcagcaggagagattgatgaggacgtttgttcagattcgtatctacaagtctagtctagtacttattttgaacagagatagtattagctatttgctagctaatactactattaaggttaaaggttgagaataataagagatgtaagtaggggtgaaaacggttacaaaaattaccgatcgaccgggcgccgtttccgtttaaggggtaccatttccgaccg</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0687200, RefSeq:Os11g0687200