BGIOSGA019066

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Revision as of 02:45, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019066| Description = BGIOSGA019066| Definition = Oryza sativa Indica Group BGIOSGA019066, complete gene.| tag = | tid = BGIOSGA019066-TA|...")
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Gene Name

BGIOSGA019066

Description

BGIOSGA019066

Definition

Oryza sativa Indica Group BGIOSGA019066, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA019066-TA

Ensembl Protein ID

BGIOSGA019066-PA

Length

7228

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:985911..993138

Sequence Coding Region

985911..986084,986764..987075,987620..987886,987966..988013,988464..988529
,988608..988711,989132..989225,989295..989351,989471..989894
,989973..990127,990224..990289,990384..990452,990703..990789
,990913..990978,992089..992135,992208..992271,992489..992566
,992674..992736,992809..992901,993034..993138

Genome Context

<gbrowseImage1> name=IndicaChromosome05:985911..993138 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:985911..993138 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGAGCTCCTGGAGCTGCAGCGGCAGCTGGAGGCGGCGCAGAGCGCGCGGTCGAGCGTGCGGCTGTCGGAGCGGAACGTGGTGGAGCTCGTGCAGAAGCTGCAGGAGCGCGGGATCATCGACTTCGAGCTCCTCCACACCACCTCCGGCAAGGAGTACATCACATCCGACCATCTGAAACATGAGATCAAGATGGAGATCAAGAAACGCGGACGTGCATCACTGGTAGATTTGTCAGATATACTGGGGGTGGACCTCTACCATGTTGAGAGACAGTCACAGAAAGTCGTTGCAGATGATCCATCTCTTATGCTGATCAACGGCGAGATCATGTCACAGTCTTACTGGGACACTGTGACAGAAGAGATAAATGAGAAGTTGCAGGAGCGCAGCCAGATTGCCTTGGCTGAGATTGCTGCCCAGTTGCATATTGGATCAGAGCTGGTTGTCAATATCCTTGAGCCTCGGCTTGGAACTATTGTTAAAGGAAGGCTAGAAGGTGGTCAGCTATACACTCCAGCATATGTCTCAAGAATTACTGCCATGGTCCGTGGTGCCGCTAGGGGTATAACAGTTCCAACAAATTTGCCATCTGTTTGGAACAGCTTGCAGCTGCAGCTCCAAGAAATGCATGGTGCTAGTGGAGTTTCTGTGGAAGGGTCATTCTTCCAGTCCATTTTCAATGGCTTACTGAAAGAAGGTGTTGTGCTTGGATCAGTCCGTGCAGGAGTACAGTGGACACCAGCTGTTTTTGCACATGCTCAAAAGGAGAGTGTTGATGCCTTTTTTTCACAGAACTCTTACATCGGATACGAAGTGCTTCAGAAACTAGCAATTCCTCAGCCTAAACAGTATTTGGAGGCCAGATATCCAGATGGTATTGCACTGGAAGCTGTTTTTGTTCATCCTTCTGTTGTTGATATGCTAGATGCTGCCGTGGGTGATACAATTGAGAATGGACAATGGATTGATGCTCTTTCAGTCCTTCCATCGTATATCACTGGCCCTGATGCAACCAAGATATTGTCTCTCTGTCCATCTTTGCAGAAAGCGATCAAGTCTTCTAAAGCAGTGGTATTTGGAGAATCATGTGTCTTCAGTAATGCATTCATCAAGGGTATTTTTGATAGACTTGAGAAAGAGATGGACTCGTTTGGCATTAAGCATAGTGCTGGACAAGGAAAACCCTCGAATATGAGCAGTGAACATAGGATAGGATCTGATGGAAAAGATCTTGGTGATAATGACACCAGCAGTATAGGTGCTTCATCTGACAAAGGTCCAAAGAAGAAAAGAGGGAAAGTTTCGGGTTCTGCCAAAGGTGCTGCAGTTGAAAAGGATGATGACAATGAAGAAAGCATTCCTGTCAAGGGCAAGAAAGCTCATAGGAAAAACAAGGATGCTGGTTCTTCTGGTGATGCAAAACATGGTGGTAAAAAAGCATCAGAGAAAACGAAAGAGGACAATACAAACATCTTTCCAGATGATTTGATAGAGCAAAAAGTTTTGACTGTTGCTCCAGAGTTAGAAGAGTTGGGAGGCTCAGATGACTTAAATGGACCACTTAAATTACTGTCTTCCCACCTGAGGCCAATGCTTATGGACGCATGGATGAAGAAAAGGAACACTATGCTGTCAGAAAATGCTGAAAGGAGGCGACGCTTGCTTGATAATCTGCAAAAACAGCTAGATGAGGCTGTCCTGGATATGCAACTCTATGAAAAATCTCTGGATGTATTTGAGGATGATCCTGCTACCTCTGCAATCCTACACAAGCATCTGCTAAGAACTATGGGTGCTCCTGTAGTTGACAAAATTTTGCTTACACTGCACAAGGACAACAAACTGAAGAATGGCATGGATGTTGAAGACAGTGAAGAAAATGTTCAATTAAGCACTGCTGACCGTACTTCTCTGGCGAAGGATCTTCCTGGGTCATTGTCGGTGAAGGCCCAAGCTTTAGCTGAAACACTGGAGGGAAAGCGGTTTGATTCATTTATGGATGCTTTAAGGGATACAGCAGAGGAAAGTGGCTTGTTATTTAAGAAGCTTGATAAAAGATTAGAGAGATCAATGCTGCATTCATACCGCAAGGACTTGACGGCACAAGTTTCTTCAGAGAATGATCCGATTTCCTTCCTCCCAAAAGTTGTTGCTCTACTTTTTCTTCAGGCGTATAATAAAGCTCTTCAGGCGCCTGGAAGGGCAGTTGGTGCTGTTATCGCACTACTGAAGGATAAGATACCAGCTCCAACATACAAGGTTTTGGCCGATTATCACAGCACTACCGTGAAAGTTCTAGCACTACAAGCTGCTGCTACTGAGGATGGGGAAGATTGCGCAACTGATCGAATGCTAGAGAGGAAGGAAGATCTGGAAGAGAGGCTGATGCCAGAACTGAAATCCCTGGTCCTGGGCACAAGCAAAGAATGA</cdnaseq>

Protein Sequence

<aaseq>MDAELLELQRQLEAAQSARSSVRLSERNVVELVQKLQERGIIDFELLHTTSGKEYITSDHLKHEIKMEIKKRGRASLVDLSDILGVDLYHVERQSQKVVADDPSLMLINGEIMSQSYWDTVTEEINEKLQERSQIALAEIAAQLHIGSELVVNILEPRLGTIVKGRLEGGQLYTPAYVSRITAMVRGAARGITVPTNLPSVWNSLQLQLQEMHGASGVSVEGSFFQSIFNGLLKEGVVLGSVRAGVQWTPAVFAHAQKESVDAFFSQNSYIGYEVLQKLAIPQPKQYLEARYPDGIALEAVFVHPSVVDMLDAAVGDTIENGQWIDALSVLPSYITGPDATKILSLCPSLQKAIKSSKAVVFGESCVFSNAFIKGIFDRLEKEMDSFGIKHSAGQGKPSNMSSEHRIGSDGKDLGDNDTSSIGASSDKGPKKKRGKVSGSAKGAAVEKDDDNEESIPVKGKKAHRKNKDAGSSGDAKHGGKKASEKTKEDNTNIFPDDLIEQKVLTVAPELEELGGSDDLNGPLKLLSSHLRPMLMDAWMKKRNTMLSENAERRRRLLDNLQKQLDEAVLDMQLYEKSLDVFEDDPATSAILHKHLLRTMGAPVVDKILLTLHKDNKLKNGMDVEDSEENVQLSTADRTSLAKDLPGSLSVKAQALAETLEGKRFDSFMDALRDTAEESGLLFKKLDKRLERSMLHSYRKDLTAQVSSENDPISFLPKVVALLFLQAYNKALQAPGRAVGAVIALLKDKIPAPTYKVLADYHSTTVKVLALQAAATEDGEDCATDRMLERKEDLEERLMPELKSLVLGTSKE</aaseq>

Gene Sequence

<dnaseqindica>1..174#854..1165#1710..1976#2056..2103#2554..2619#2698..2801#3222..3315#3385..3441#3561..3984#4063..4217#4314..4379#4474..4542#4793..4879#5003..5068#6179..6225#6298..6361#6579..6656#6764..6826#6899..6991#7124..7228#ATGGACGCGGAGCTCCTGGAGCTGCAGCGGCAGCTGGAGGCGGCGCAGAGCGCGCGGTCGAGCGTGCGGCTGTCGGAGCGGAACGTGGTGGAGCTCGTGCAGAAGCTGCAGGAGCGCGGGATCATCGACTTCGAGCTCCTCCACACCACCTCCGGCAAGGAGTACATCACATCCGTACGCCCCCGCCTTCCCCTTCCCTTCACCCTCACCTCGCCGCATCTCTCCATCTATCTACTTCCCCAATCCCTCGCCGATACTTTCGCTAGAATCAGATTTACCTGTAAAACAGCCTCTGATACATACAACGCAGTGTAGATTGTTCTGGATTTGGGGACTCTGGTATTGACTAATGATGTTAATAATGGGAATGATGGACTCCGCGTAGAAATTATGGGCGTTCGGTATCGTCAAAATGTCGAATCTAAACACTGCCGATGCTGAGTACCCCTCCTCCTTGATTGCTTTAATGCTAGTATTAGGTACTGAACTGAAAATTGGACTTACAATTTTGGGATGATTGCGATTAAAGGATGCCGACCATTAGATTATTGCGAGAGAGCTTTCACTTCGAAGCAGGGAACAACATGTAAATTTGGTTGGATGGAATTGGCATTTCCGAATCGGATACTGGTTGTGTTCTATCTATATTTTGTGAGGACTTATAATTTGGTTTTAGTATTTAGATATTCTGGTCCACATGTACATTTTAATGTCTGTGCAAATTGAAGAGATTAGGTGGAATTTTACCTATTGATTATTACTACATATTCCTCTTCAGCAGTTCAGTTCAAAGCACTTGCTTAACTGAGGATTCATTGTTCTTAGCTTATTCATGCTCAACTTGGTTTGGCAGGACCATCTGAAACATGAGATCAAGATGGAGATCAAGAAACGCGGACGTGCATCACTGGTAGATTTGTCAGATATACTGGGGGTGGACCTCTACCATGTTGAGAGACAGTCACAGAAAGTCGTTGCAGATGATCCATCTCTTATGCTGATCAACGGCGAGATCATGTCACAGTCTTACTGGGACACTGTGACAGAAGAGATAAATGAGAAGTTGCAGGAGCGCAGCCAGATTGCCTTGGCTGAGATTGCTGCCCAGTTGCATATTGGATCAGAGCTGGTTGTCAATATCCTTGAGCCTCGGCTTGGAACTATTGTAAGTCTGCTAGTCTACCCTTTTAATGGTTTTTATCATTGGCTATTTTTTCTGCTAATCTATATTTATACTTCGATAATCTAGATGTAATCTGCCATGCCAAGCATCATAGAGATAGTTAGTTAGCTGGTCCTAATAATTAAGTTATTAGTCGAAGAGGGCATTTTAGACACAATTATAGGAGCTTAGTCCTTTCCTGCTTCTGCTGCTTCAGCTCACAATTTATGGACATTATTTTTTTTTCCTAATTTCTGGTACACGAGTCACTGTTTCCTAATATTTATGTGGCTGTGCCATTTCTAAAGATCATCATTGTCCCAATTATTTGTTTGATTGTTTCTACCTTTCTCTAGAGTACTGATGCCTTTTCATGTCTCCAAAGTCAAAAATGTATTATGAGTTGTGTTTTATACTTTACAACAGAACCGCAAAATCATGCAAGAGACCATAGCTACAGTCAATCTGAACAGACCCTTCTTACTGCACCCTGGCATTTTCAGTTCTCATTCAAGCAAAATGACACTATAGAAAATTCTCCTTTCAGGTTAAAGGAAGGCTAGAAGGTGGTCAGCTATACACTCCAGCATATGTCTCAAGAATTACTGCCATGGTCCGTGGTGCCGCTAGGGGTATAACAGTTCCAACAAATTTGCCATCTGTTTGGAACAGCTTGCAGCTGCAGCTCCAAGAAATGCATGGTGCTAGTGGAGTTTCTGTGGAAGGGTCATTCTTCCAGTCCATTTTCAATGGCTTACTGAAAGAAGGTGTTGTGCTTGGATCAGTCCGTGCAGGAGTACAGTGGACACCAGCTGTAAGATCCGTACTTTTTTAGTTCGTATTCTTAACACTTAAGCTATATTTGACATTGTGGCGATTTTCTTGTTTTTTAGGTTTTTGCACATGCTCAAAAGGAGAGTGTTGATGCCTTTTTTTCACAGGTTAAGAAATTTCTTTTCTCAATTATGCAAGAGAACTGCATCATATCATTACATTAAGAAGAAGAGGTTTAAATATTTACAAGACACCCACTGCCGTGGAGATGGAAAAGGAAAGAAAACAAACCACCAAAATCCTCCAAAATCAAGAAATTTCCAACTTATAATTTAGTTCCTACAATTTATAATATGTTAGAAGCATTAGTAGCGCAACTGGACCATATATTTATCTGGGCAAGATGACAACTTTGCATGGGTATTTCATATATAACCACTGGACATATTCTTCCTTGTGCGTGCTCATGCACAAACTGGCGAACAGCTTTACCATATGTTGTTACTCAAAATTAAATCTCTAGGTCTGATATTTAGCAAGGATATTGAATTCTGAAACATATGCTAAAATATAGTTATGCATTATCTCCTGTTTGTAACTTATTTGTCTTCTTTCAGAACTCTTACATCGGATACGAAGTGCTTCAGAAACTAGCAATTCCTCAGCCTAAACAGTATTTGGAGGTAATGGAAGCTGTTAATGTGCCTTTACTGTTCAAATCATCGGTATGTTTATATTAACAATATTGTTCTCTTCTATAGGCCAGATATCCAGATGGTATTGCACTGGAAGCTGTTTTTGTTCATCCTTCTGTTGTTGATATGCTAGATGCTGCCGTGGGTGATACAATTGAGAATGGACAATGGTATTGTTAAATTTCATGTCTCCTCCAAGGTTAATTGTGATTTGTCACTGTTATCTGCTATGAGCTCCAAACTAAAATATAAAAAAAGAGCTGAATTTGCTGATGTTCTCCCTGTGTACATGGTTGGAACTTCAGAACTATTACAAAGAGTTTATATGATATAACATGAGAAAAGGAAAGGGAGTAAGCTAATCAAGCTATAACAATATATGGAGATAGACTAACAACTAACTTCAGTCCACACTTCACAGAAAGTCATTTACACAGATGAGATTTGACCGAGAGGCCTAAACCTTTTTAGTAGTGCCAACATGTTTTTTTGCAGCTTTTTCCTAATTGATTGTTCGGAGTAATCTGTTTTGCTGATGTGCCCTGGACTTCTCTCATTGCCTATCTTTGATGTGTCCTTTATTCTTTCAGGATTGATGCTCTTTCAGTCCTTCCATCGTATATCACTGGCCCTGATGCAACCAAGATATTGTCTCTCTGTCCATCTTTGCAGAAAGCGATCAAGGTTGGTGTCTTTAAAGTAGTTCAATTTTGTAGATTTTTCATGATAACTCATTAAAATACTTGTTTGCAGTCTTCTAAAGCAGTGGTATTTGGAGAATCATGTGTCTTCAGTAATGCATTCATCAAGGTGAATTGTCAAGTCCCGCTTCATGGATTTGTTAAAATCTTTGATGCATTCATATCCTTTTTTTCATGTCCCTTATATATCTAAATGAGTGTAATTTTCTGTCCTTTGAACCATTTTAGGGTATTTTTGATAGACTTGAGAAAGAGATGGACTCGTTTGGCATTAAGCATAGTGCTGGACAAGGAAAACCCTCGAATATGAGCAGTGAACATAGGATAGGATCTGATGGAAAAGATCTTGGTGATAATGACACCAGCAGTATAGGTGCTTCATCTGACAAAGGTCCAAAGAAGAAAAGAGGGAAAGTTTCGGGTTCTGCCAAAGGTGCTGCAGTTGAAAAGGATGATGACAATGAAGAAAGCATTCCTGTCAAGGGCAAGAAAGCTCATAGGAAAAACAAGGATGCTGGTTCTTCTGGTGATGCAAAACATGGTGGTAAAAAAGCATCAGAGAAAACGAAAGAGGACAATACAAACATCTTTCCAGATGATTTGATAGAGCAAAAAGTTTTGACTGTTGCTCCAGAGTTAGAAGAGTTGGGAGGTCAGGAAGTTAACAACATTGACATGATTGTTTCTACTGTGTTTAAAATTTTAATTCTATAATTCTAACTATTTTCAGGCTCAGATGACTTAAATGGACCACTTAAATTACTGTCTTCCCACCTGAGGCCAATGCTTATGGACGCATGGATGAAGAAAAGGAACACTATGCTGTCAGAAAATGCTGAAAGGAGGCGACGCTTGCTTGATAATCTGCAAAAACAGCTAGATGAGGTAATCTTCTTTTGAGTTTTGACCACCCATCCATATGTTATTTTTCTTTCTGCGTTTCTATTGATATTTTTTAATGTATTTGTCTATTGTCATCAGGCTGTCCTGGATATGCAACTCTATGAAAAATCTCTGGATGTATTTGAGGATGATCCTGCTACCTCTGTAAGCTGCTACAGTCATTATCTTCACAAGATTGATTGCCACCCAATAAATCAGTATCATCTACTTATGGTAGAATCTTCTTTCCTGTTTCCAGGCAATCCTACACAAGCATCTGCTAAGAACTATGGGTGCTCCTGTAGTTGACAAAATTTTGCTTACACTGGTAACTTAAATGCCTGTCTTCAACTTCATAATTTTGAAAGGATTCTTTGTTATACTCTATGTTTCAGTTTTCTCAGTTTTGCTTTACACTTGTAATATAGTTATATAGACCGCTTCAGATGAACAAGAATCTCGCGGATAGCTTTCTGCACTAGTTGTTTCCCTGTTTGCTTCTTGTGCTGTTTGCTGAAGAAATAGCAAATTGTTAGTATCTTGACCATTGTATATACTTTGCATTGAATCGCTGATAGCACAAGGACAACAAACTGAAGAATGGCATGGATGTTGAAGACAGTGAAGAAAATGTTCAATTAAGCACTGCTGACCGTACTTCTCTGGTATAGTTCTCCCTTTTTTTCTTCCTCAATGTATTAGGTGGTGCTTCCAGCAGTGAACCTGAGTGATAGTTTCATTTGGTTTAACTTTCTGTGCTTGTTTGTGATTTGGAAAATAAACTTTAGGCGAAGGATCTTCCTGGGTCATTGTCGGTGAAGGCCCAAGCTTTAGCTGAAACACTGGAGGGAAAGGTTCGACTTTAACTAAGTTTTTATTTTCACATTTTCTTATAATATCTATTATTTCTGGCAACTGTGTTAGCACCAAACAATTTAACATGACACACGTGTGCACACAGAAAAAAGAAGTGGGGGTCCCTGGGCTATGAATGGCTATTGGTCAATTAAGAATTAATGAATGAAACTATTCATTCTTGGGACAATGAATCTAGTATCATTAAAGAATTCATACTCGAAGTTTTCTGCGTTATGGCTCTTACCAGTTATCAGACTGCAAGATGCCATATTGTAGAAAACACAAACAGCTTCATAATAGCTTGCATCCTGCCTAAATCCTGTAGGAACTAGAACCTTATTTATTTGTGGCAATTTGCCAAATGTTCATGCTACCAATAAATTGATTTTCTAACACTAGGTAAATTAAATATGCAGCACAAGTCCGTCAAAAACATTCACCAATGAAGATTTTGAAGTGTTGAATCTTTAATAGATTATATATTGTATTATTTTGCGCAAAGGCATTTCTTAGTCAAACTATAGCTTTACAAGATGGCTCAGATATGAGATCGTGCGTGTAAGAAGTACTCCCTCCATTCCATAATGATCAGCGCATAACGAAAGTAGAGATATTCCGATTTGATCAGCGTATTAACACTGGTAGCATGTGCATGTCAGATGGTTTAACTAGTTATCACAGAGATCGAGTAGGCCATCCGATTTTTGAGCTGCATGCAGCACGGAACATCCCTTGCATGTGCAATCATGCAGCGGCAGTAACGTCGTTTCGTTTCTCCAAGCCGATTAATATGGAGATTAATTACAAGGATTAAATAGAAAATGGGTAGTGGGTCTCTCCTTGGTCTTGATGCCACAACAAAATATGCTGATCATTATGGAATGGAGGGAGTATGTTGCATAGTGTATATCTAATATTCAACGATATTAAACTTCTCTAAGTTGTCATAAAAATGTTTGTACTCCTAAGCAGCGAGTTCATTGTTGTGTGGAATGCTAATAGTAACAGTCAACTGCTAAATTTCGGACATTGAACAAAGTCTGTGACATTACATATCAAAATTGGATGTTAGTTCTTCCTAACCTTTTCCTTCTAATACATTGCAGCGGTTTGATTCATTTATGGATGCTTTAAGGGATACAGCAGAGGAAAGGTATTTGTGTTGTAACTGCTTTCCACAGCATCTGAACTATCAAAATGCTTATTACCTTTTTTTTAATTGCAGTGGCTTGTTATTTAAGAAGCTTGATAAAAGATTAGAGAGATCAATGCTGCATTCATACCGCAAGGTATGTTCTTTGGGTATCTTTGAGTGTACCACATTGTCTGATGTTTGAACTGCTAAACCTGATGAGTGTTACTCTTATTGAAAAAAAAATGATGCTAAATATAGTAAGCAACGTGCAAAATGCCAAATGGCAACTCTGTTATTTGGCTGATAGGTTAAGTGTCTTTAAATTTATATTGCTATTTATCTGACACCTCAATTTCTTATATGATATGAAGGACTTGACGGCACAAGTTTCTTCAGAGAATGATCCGATTTCCTTCCTCCCAAAAGTTGTTGCTCTACTTTTTCTTCAGGTTTGTTTGATTGTGCTACCTCTGATTATTTTTTCTGTTCTTCGTTCAATACTTTTGTATTGATCCTGAGAAACAGCATATTATATTCCCTTTAATCTTTTTTGTAGGCGTATAATAAAGCTCTTCAGGCGCCTGGAAGGGCAGTTGGTGCTGTTATCGCACTACTGAAGGTAACTAATTTATTTTTTATCTGTTTAAGATACACTCGATGCAGTTGAAGCAGTATATAAACTTTCTTTCAGGATAAGATACCAGCTCCAACATACAAGGTTTTGGCCGATTATCACAGCACTACCGTGAAAGTTCTAGCACTACAAGCTGCTGCTACTGAGGATGTAAGTCCACTTATTAAACCATTTCAAATTTGTCTGCCTATTAAAGAAGGATTGAATGTTATTAACTTAGAAGTCATGAACTAAAGTGCTGATGCTTGCATTCATAAACTAACTTGGGTCGTTTCCATGCAGGGGGAAGATTGCGCAACTGATCGAATGCTAGAGAGGAAGGAAGATCTGGAAGAGAGGCTGATGCCAGAACTGAAATCCCTGGTCCTGGGCACAAGCAAAGAATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019066