Os11g0687900

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0687900| Description = Similar to MLA10| Version = NM_001189793.1 GI:297728716 GeneID:9267664| Length = 6850 bp| Definition = Oryza sativa...")
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Gene Name

Os11g0687900

Description

Similar to MLA10

Version

NM_001189793.1 GI:297728716 GeneID:9267664

Length

6850 bp

Definition

Oryza sativa Japonica Group Os11g0687900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29736943..29743792

Sequence Coding Region

29737822..29738546,29743072..29743762

Expression

GEO Profiles:Os11g0687900

Genome Context

<gbrowseImage1> name=NC_008404:29736943..29743792 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29736943..29743792 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggagctgacgaaatgggtgacgaacgagacataccaagacggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcactgtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctccgacgttgaggccatcttgagaagcatacttgaacaagtcatgccgcagtccaaggatggtcaggagctgcagggtggccacgcctcccagaagaagcttctacatcaggcagtcatcagctacttgcatcctctcatgcccaaggccctccgacgccgaagcagctccaactccaactccgacaactccaagattagagaggggaagctaacgcgtctcccgagagctctcaccctggatcgccagtatgaccacgatccgcaggacggcaacgatgctgccgccggctcatctgagacagtagtaacaacccctgcaacgaaaggcacggccacctccgatgaaaagcctactagtgtcattgctaccatacggggtgccttcaggccctgggatcgccgtcgccacccaccgcaggatgacaaaggtggtagcacctcaggctcagggaaggaggctattaacattcaaacaatgaacaagcccggcgaaaaaaacattcaaaccatgaagcgtgacggtctctcaaaattgctgcaggagcacctaaatcaaaaaaggtatttcctattaattgacgatgtgtggtctgccacaacttgggagcagatcagaaagcacttgcctacagataacctaagctacagaataatagttaccacaaggtttcaagctgttgctaccgcatgtaaaaggaaagaaagtgaccgcattcacaaagtggatgttcttcgcggaaaaaaacccgaaaaactcttcaatgaagtcgagtccgaatccagaatcagcaaagatggtgaacggaaagagatagatgatggtgaacagaaagagagagaaggtcaacagaaagagatagatggtgaacagaaagatatagtgcgtccccgcaggatctgggaaatgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaactcagacaaagatgagacacattggcttaatgtctgtaaatctctagttccagagtcgggaagagatatgacacaggagggtgtaaccagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggaggcatgcttctgttggaaatatagtcattaa</cdnaseq>

Protein Sequence

<aaseq>MKELTKWVTNETYQDGVLSVLGFGGVGKTTIATALYRQLGDQFD RRAMVTVSQSSDVEAILRSILEQVMPQSKDGQELQGGHASQKKLLHQAVISYLHPLMP KALRRRSSSNSNSDNSKIREGKLTRLPRALTLDRQYDHDPQDGNDAAAGSSETVVTTP ATKGTATSDEKPTSVIATIRGAFRPWDRRRHPPQDDKGGSTSGSGKEAINIQTMNKPG EKNIQTMKRDGLSKLLQEHLNQKRYFLLIDDVWSATTWEQIRKHLPTDNLSYRIIVTT RFQAVATACKRKESDRIHKVDVLRGKKPEKLFNEVESESRISKDGERKEIDDGEQKER EGQQKEIDGEQKDIVRPRRIWEMCSGLPLAIVTMAGHVACNSDKDETHWLNVCKSLVP ESGRDMTQEGVTRILGHCYNDMPAELRTCSLYLSIFPKGNKISRKRLTRRWIAEGFVS EKQGQSVEDVAEACFCWKYSH</aaseq>

Gene Sequence

<dnaseqindica>880..1604#6130..6820#agttggatgactagctagataagaaggcttagtggggattcctttacatggcgcgttattagatgtgccaagagctatattgatccagagaccagaatttgagccctgaattcaactacaaaaaacattttggctgttggaaaagaagatcgtgttgattggaattgtaagtagtcctagctagtgctgcgtccagttttgtttcttgatactctctctctacaaaatcataatcccattttatgtgtgtgcgctgtgcaagccgcaggagatcttgagtagatcagggatcagtgtgtacgtgagaagagtcgggcaagcagcaatggagcatgtggtgggtgcttcggaggccaccatgaggtctctgctgaccaagctcgggggcttactctcccaagagtacgctctcatccgtggcgtccggggagacatccagtacatccgcgacgagctgacgagcatgcaggcgttcatccgcgacctgagcggcacgccggagggcaaaggcgacgagcacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgaggactgcatcgacgacttcgcgcaccgcctctcccacgaccccggcggcgactacctgtgcggcttcgtcgtgtccagggtgtacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaagatgctggcgcagcagatcggcgagcggcgcacgaggtacggcgtcgagaacccccaaaaaagatcgggagatgagaacaaatccggtccagccaccattggatttgatgccgccgagaaccagcacacaaaccttgagagctggtgggagtggaggcctacatgaaggagctgacgaaatgggtgacgaacgagacataccaagacggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcactgtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctccgacgttgaggccatcttgagaagcatacttgaacaagtcatgccgcagtccaaggatggtcaggagctgcagggtggccacgcctcccagaagaagcttctacatcaggcagtcatcagctacttgcatcctctcatgcccaaggccctccgacgccgaagcagctccaactccaactccgacaactccaagattagagaggggaagctaacgcgtctcccgagagctctcaccctggatcgccagtatgaccacgatccgcaggacggcaacgatgctgccgccggctcatctgagacagtagtaacaacccctgcaacgaaaggcacggccacctccgatgaaaagcctactagtgtcattgctaccatacggggtgccttcaggccctgggatcgccgtcgccacccaccgcaggatgacaaaggtggtagcacctcaggctcagggaaggaggctattaacattcaaacaatgaacaagcccggcgaaaaaaacattcaaaccatgaagcgtgacggtctctcaaaattgctgcaggagcacctaaatcaaaaaaggtacttcgcctcaaccccttgcttcgtcatgattgatagatatcatatacacctgcattttatggcaaaatatcgaataggctttactgtactcttcagataattaacttggagctagcatgcatatatatctcctatagattaaattcttcagaagaagggcttatgtatgaaaataaagagttcttaacgacataagcttaaatccattagaaattccaaattacacatgccacatgaattgatttatcactagctagttgataatattattggcaacatacatacaaacaaacaaacaaacacacacactcacacacatatttgttaagttatatcctgaatgatatttttactctgctcctgtacgtggactaatattgatttcatccaatacataacttaatatgaaaatataccacatcatcatccactagcaattacaattctaaatcattttaaatctcatgcaatacagacatatcatctacaatttattatattatagagctcaatatacaagtatatgtctaatcatcgtcttcacatcattttaacaatatttcaatatatatcatttctataatatttaacataaattcatccataaattcctcagcaaagtataaggtatcacccactaactactagttactgtccgcttaacctattagaggtaatactatatgattacaaaaaaaggaaatgaacaataaactagcttccgagtgttattgaagaattgttgtttattaataatacatgtaaaatagtatagtctgacttccaatggacacatttgaattacaatttgcaaccatcatatttataccggccagtaattttttaattgtatttagaatatattatcaaaccgggctatatgacaacagttacatttttttttgctacaagtaattcaaatcttcaaatcagctaatttatttctagctacaaaccacagtagatagaatacgaaaatttagatatgcaatttaaaaataacaaaaaattagaattaaacataagtaatattagaagaggagattagagtccatacaagtatacaatttgaaactaattgaaattcagaattaaaaaataaaaaaataaaagtagaagtcaaagtccagatataaatataatttataaataactataattcaaatttaaaaaaaggaatgttgcgagaggtctatagtcatatagaatataattcagaaaaaaatgaaattcagaattaataaaaaagaaatattgaaagatgagtttagagtccatatagaaatacaaccagaaataatgaaaatttgaaattaaaagtagagtttagagttcatatagaaatacaattgaaaataactaaaaattcaaaatttagaaaataagccagattggtagaagagtctatagtacatatagaaatacaatttataaataactgaaattcgaaattaaaaaataaggaatattggaaaagaaattatagagtacatataggaatactccctacgtccaaaaatatgagacctatttctttttgcaccaagaccaaggaacaattaattcattcaccatctgataaaaccaatagatatgcaaccaataacttataaaaatgacttcttaggttccgatcagcaatttaatttagcacatggtggctacaaataggacttagacttttggaaaaaccaaagaatggaataggtctcagacttttcgatggagggagtacaatttataaataactgaaatcagaattaaaaaatattaaaaaagtctagagtccatatatgaatacaatttacaaataacaaaaagtagaaattaaaaataagaaacattgaaagaagagttcaaagtctatatagaaatacaatttacaaataaataaaatttggagttaagaaaaatgaatattgcaagaagagtctagagtccatatagaataatgaaaattcaaaattaaaaaaaaaggaatattgacggaggaatctggattccgtatatgggaataaaatttataaataatgaaagtttgaaattgtaaaaaggaatattgaaagaggagtatagattccatatataggaataaaatttataagtaatgaaaatttaaaatttaaaaaatattaaaagaggagtctagactccatatgaaaagacaatttagaaataactaagattcaaaattaaaaaataattaataattatcacgtatatacaatacaatatgaatatcatatattggttattttgctcaacttagcacataatataaaattatgttgtcattttaatatatttttataataaagaatgaaaatatttaagctattaaatgagaaaaaaatataatgatgctagccgtgtaatacgcactggctccatgctagtttggaattattcaaacaaatattaagcaatgatcgaaacaaccactgaatatatacttaatgctcttcatctaaaacttgttgggtggcctgcgcaattgcgcggctagcacccatacaaaattatatattttttaatataattttacttaaaatttattaaatagctatctcgctgtcttaagccataccttatcatctccgtgtttctaatttatagttttttaaaagtcattccatttgctaccccttatttctaccatctccttctttatttgtttgcttgatctatcattttttctactcattcttcttagaacctttaaaaattggatcgtataattttcagagtttattgtctcgttgggttttcttttcagaatttctagaagtctcgtcaaatgttaccattatacttttgtacgacccatccactgtctcttctctttattctcattcagattttaaaaatcggacataattattatttgggttcatttttttactttatagatgttccgccaaaccgtcaggctttgccactgtactcctctatggctcaccctttcttttttggcattgagactttaaaatcaaacataattatcattgtgtttttttttactttttagaagtcccggacctttaaaaattgggccttgcaatttttagagtttattatctcattgggattcatccgccgcctactcattattgtcattgggattctaaaaatcgatcataactatcgttggaatttatttttacttttttagaagtcctgccaactattgacggctataccactttactcctgtacgacccgaccgctgtctctcctttttatttttattgatattttaaaaattgaatatgattatcattggggtttatttttttactttctagaagtcctgccaaccgccttgaccggctgcttcacggcccgtccgtcatcactccttttaatcgttattaggattctatttggtgttttataatagtttttagatgtcccatcaaccgccaccatcttactactttataggcatgttacttaattaatctcgtcatgtgttttagatggtctttttctttcaatagcctttatttttttctcaccaattttagttatttataaattgaatttctagttgaaatcttctttatatttttctaatttcagaatttattttatttttattttgaattctaattaatatagtattatgttcttttaatattttaattttttattttcaattttagttgttttaaaattgtattcacacttgaactctctttttagtttgtctaatttcgtattttattttattttttattttgaattttaattaatcacgtattggattctaatatggacttttctttcaatattacttattttaattccgaatttcaattaaacttaaattgtattcctacttgaactcttctttatttttttctaattttattttattttattttgattttgaattagtctcgtattgggtttttatatggactcttctttcaatattgtttaactttaattacgaattttagttatttttaaattgtatttctacttgaactcttcttttctttttttttgctaatttcggattttattttatttttattccaaatattaattaatctcgtattgggttcttatatgaactcttctttcaatagtgcttatttttaattttgaatttcaggtatttttaaattgtatttctacttggactatgcttttctttttttccgattaatgtgggaatttctagctcccacagccaacgtggtgtctaatttcaaagttgttttaataatataattgatactactagctaatatctaatgactaaaagacacttgatgtatatttctatctatattacacatgatcactaaatcatttaatttctattatctgaaagaaaaatattacacatgatcacagactatataaaattttgctttattacttgagggctaattaagatttagtgggcacagttgagtcggttagatgtgtaacatgagtaatacctttttaccccgtctgaaaagttttttttttctacattatggttcagactatttttcaattgcaggtatttcctattaattgacgatgtgtggtctgccacaacttgggagcagatcagaaagcacttgcctacagataacctaagctacagaataatagttaccacaaggtttcaagctgttgctaccgcatgtaaaaggaaagaaagtgaccgcattcacaaagtggatgttcttcgcggaaaaaaacccgaaaaactcttcaatgaagtcgagtccgaatccagaatcagcaaagatggtgaacggaaagagatagatgatggtgaacagaaagagagagaaggtcaacagaaagagatagatggtgaacagaaagatatagtgcgtccccgcaggatctgggaaatgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaactcagacaaagatgagacacattggcttaatgtctgtaaatctctagttccagagtcgggaagagatatgacacaggagggtgtaaccagaatacttggtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatattcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggctttgtcagtgagaagcaggggcagagtgtggaggatgttgcggaggcatgcttctgttggaaatatagtcattaatcggcatattttaatccaaaaggttaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0687900, RefSeq:Os11g0687900