BGIOSGA019107

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Revision as of 02:46, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019107| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019107, complete gene.| tag = P0683F1...")
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Gene Name

BGIOSGA019107

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019107, complete gene.

LocusTag

P0683F12.11

Ensembl Transcript ID

BGIOSGA019107-TA

Ensembl Protein ID

BGIOSGA019107-PA

Length

8000

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:1750768..1758767

Sequence Coding Region

1750768..1751109,1753845..1754041,1756414..1756549,1756644..1757116,1757225..1757342
,1757700..1757849,1757977..1758063,1758474..1758767

Genome Context

<gbrowseImage1> name=IndicaChromosome05:1750768..1758767 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:1750768..1758767 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACGACGTACAGGGTGTGCTGCTTCCTGCGGCGGTTCAGGGCGGCGTCGAACGAGCCGTCGGAGGAGCTCGGCGACGTGTTCCAGGCGTACGCCGACGGCGGCGGCGGCGTGATGGGGGAGGAGGCGCTGAGGCGGTTCCTCCGGGAGGTGCAGGGGGAGGCCGCCGGCGGCGGCGACGACGAGCTGGAGGCGACGGCGAGGGAGGTGATGGCCTTCGCGGCGGAGCAGAGGCTGCTCAGGAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGCACAACTCATACCTGACGGGGAACCAGCTGAGCAGCGGGTGCAGCGAGGTGCCCATCGTGAAGGCCCTCCACGACGGCGTCCGTGTCATCGAGCTCGACCTCTGGCCCAACGCTGCCAAGGACGCCGTCGAGGTCCTCCACGGCAGGACGCTGACATCGCCAGTGGGTCTGATGAAATGCCTTGAGGCCATCAGGGAGTACGCGTTCGTCGCCTCCCCTTACCCCGTCATCCTCACCCTCGAAGATCACCTCACTCCCGACCTCCAATCCAAAGTCGCCAAGATGATCAAGGAGACGTTCGGTGACATGCTCTACGTCTCTGAAACTGAGAACATGGCGGAATTCCCTTCGCCGGACGAGCTCAAGGGGAAGATCATCGTGTCGACGAAGCCGCCCAAGGAGTACCTCCAGACCAAGAACGACGCCGACGCCGACGAGGCCGGCGTCTGGGGCGAGGAGATCACCGACGACAAGGTGGCGGCGACGGCGATGACGACAGAAGAGAAATGCGCGGCGGCGGAGGAAGCAGTCGCCGCCGCCGCCGTCGACGAGGAGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAACTTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGCTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCACCGCGGCGAGCCCCTCCGCTCCGTCAAGCTCCTCATGCGCTTCGACTTCACCTGA</cdnaseq>

Protein Sequence

<aaseq>MTTYRVCCFLRRFRAASNEPSEELGDVFQAYADGGGGVMGEEALRRFLREVQGEAAGGGDDELEATAREVMAFAAEQRLLRKGGAAAAGGGLTVEGFHRWLCSDANAALDPQKRVYQDMGLPLSHYFIYTGHNSYLTGNQLSSGCSEVPIVKALHDGVRVIELDLWPNAAKDAVEVLHGRTLTSPVGLMKCLEAIREYAFVASPYPVILTLEDHLTPDLQSKVAKMIKETFGDMLYVSETENMAEFPSPDELKGKIIVSTKPPKEYLQTKNDADADEAGVWGEEITDDKVAATAMTTEEKCAAAEEAVAAAAVDEEMQEAETDKKTQHGVDNEYRRLIAIPLTRRKHDMDQDLKVDPDMVTRLSLGEKAYEKAIVTHGAHIIRFTQRNLLRIFPRSTRITSSNYNPLMGWRYGVQMVAANMQGHGRKLWLTQGMFRANGGCGYVKKPDILMNNDPDKLFDPTSKLPVKTRLKVTVYMGDGWRFDFRKTHFDKCSPPDFYARVGIAGVEADTRMEQTKVKMDTWIPAWDHEFEFPLSVPELALLRVEVHESDNHQKDDFGGQTCLPVWELRRGIRSVRLCDHRGEPLRSVKLLMRFDFT</aaseq>

Gene Sequence

<dnaseqindica>1..342#3078..3274#5647..5782#5877..6349#6458..6575#6933..7082#7210..7296#7707..8000#ATGACGACGTACAGGGTGTGCTGCTTCCTGCGGCGGTTCAGGGCGGCGTCGAACGAGCCGTCGGAGGAGCTCGGCGACGTGTTCCAGGCGTACGCCGACGGCGGCGGCGGCGTGATGGGGGAGGAGGCGCTGAGGCGGTTCCTCCGGGAGGTGCAGGGGGAGGCCGCCGGCGGCGGCGACGACGAGCTGGAGGCGACGGCGAGGGAGGTGATGGCCTTCGCGGCGGAGCAGAGGCTGCTCAGGAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGGTACGTACTTAATTTACGTGATTAGTTAGCTAATTAAACTCGTAATTAACACCTAATTAATCATGATTATGCATGGATTCGACGATCTCTTCCTCCATCATATAGCTTAATTAGCTACTCTTGTGTTCAATAGATACTACTATTAACAAATGAGTGTGAAATCATCCTGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATCATAATAATAATAATAATAATAATAATAATAATAATAATAATTGATAATAATGCTCCTCCTATGCTTTTCCTTTTTTTTTACGGAAGAATGTAGAGTAGGCTTTACCTTATAGTCATTTCATTAATAGAAATGAGGTTTACAGATTACATATTAGGTGTGGGAATTATCAGAGAGAAAAAAAGAACAAAAAGCAGAACAAACCAAAACAGAAAAAGAGATAATTTACAGATATATGTACATGCCTATGTTCTTCTATAGAAACTATATCCCAGTTACTTATTATGCGTATATATATAAGGAATTAATTCACATTCAGGAGCAACTAGGCAAGGCCTTCATCGTCAGATACTGTACATGGATAATCATACAGAGGCTAACCATGGCCATGCAAAAAAGCTAAGGGAATATTTTTTTAGTGCCATATATATATATATTACTAATCCTTTGTGTATATATACTATCTGGCATTAATTTAATAGTTTTTTATGGCCAGATAAACTAGTAAATTAAATTAGGTAGAGGAGCAGTTGGTTGGTTATTAGGAAAAAGATAGATTAAAGCTTGTTCTATTTGGTGCCAAAACATGATGCATCACTGTACTGTTGATTAACAGTTAGGCACATGAGAAGCTAGTAGAAGCTTACATTAGCATCTACAGGGTGGGTCAGATGAGACATCAAAAGATCGATAAGGATCACCTAGACTCATATAGAAGCAGTTAATATGGACAGTCTTGATCTACTTTCACCGTGTTTAGTTCCAAAATATTTCTTTAAATTTTTAACTTTTTCATCACATCAAAACTTTTCAACACATATAAACTTCTAACTTTTCCGTCACATCGTTTTAATTTCAATCAAACTTTTAATTTTAACGTGAACTAAACGCAGCCTTTAATTAGCTTCCGGTGTTATATCTCTTCAGGTCTTAATTAGTACCTTCTGTCACTTGCTCCTCGATCGATACAAACTGGATAGTATTACGTTGGAAGTACAAATGAATTGCTAGCAACTCGGATCTTGACTGACGCAATATTAAGTAAAAACATTGTTAACTGACACCCAAAGAAAAATATAGCCAACCTAGTACCTGTATCAATTTCAAGCAACAGACCCGAAAGATTCTCCAGTTCTCCGCGTGGACTGAGCTAGCTGTGGCTGCCGCAGGACTCAGCAAGCAAAATTCTAATATGAGTGTTGCGGTAGAGTTTATAAAACCATACGGTTATTATGGTGGTTATCACGTATGATAATCTTCTCAGTTTTTGAAACCACGGTATATATCGTGATAATCGTACAATTTTCACAGTAACCACGTGATTATCATGATAATCATCAAACCGTTGGGTGACGATAACTCCACCCATAATGGTTTGGTGAACCTTGTGTTTCAGTGCTAGCTTTAGCAGCTGAACTGAACCGAACAGACCCAATATTTCTTCACTAGTGTCCCTCACAGAATCTTAAAGCGGCTTCTTCTACTAGGTTTGATTTTTTCCCCCTCCCCCTCTTCTCATCTCCACCTTCCATCCTCACTTTCAGCTGGCTTAGAAGGGCAGGTGGTCCGTTGGCAACTTGGCATTGCGGTTGCCTAGGCAGAGGCAACCTAGGGACCATGGATGAGCTCTCACAAGCGCCTCCAAAACAAAAGAAGATAAGGTCCCTGGTCATATGAGAATGGAGAACAGGTCGATGATGTTGGAATAAGTGAATTCCCGTCTTTCATTATCAGTCTAAATTTTTTATTCAAATCAATTGATGCATGCAACTCAATATAGTATCAGTCCCAAGTTTAAACCCTAGTTGGCATATAATTAAATAAAAAATACAACCTATTTCTATCTAAGGTTTGAGGGGACCTCGTGTGAAGGAAAGTGTTGAAATATAAGTGAATTGTCCGTTTTTCTTCATCAGCTTAAACTTTTGGGTTAAACTGTTCGGGATGTATTACACAATAGTGAAAAGAATCTGTGTATACAACTCAATGGTGTGGAGGAGAAATTGGTCAAGTCTATAGAGGGGTCGGTGCGTACAACTCAATCGTGGGAAGTGAAGAGGAGGTCAGTGTGTACAACTCAATAGTGGGAAGTGAAGAGGGAGGTTGGTGTGTACAACTCTATTTTTTTAAGATAAAGACAACTCAATTAATAGTGGGAAGTAGGGGGGGGGGGGGAAGGAGGGGGGGATCGGTGTGTACAAATGTAGAAGGGGAAATTCAGATGAGCATGTTGCTGCCCATGCGCAGAGCTACGAGAAGACTGCTTTTGCGGTTTCGCCTAGGACACTTGCCATGTGAAAATATCAAGTCCTTTCGGTGAGCGAAGGACCGAAGTCCTACATAACTTTTTCCCTTGTTTGATACTCGATAAACCAAAACCAAACCGTAAAAACTGAATATATATTCATGTAAAAAAATAATCCTCGCTATACAAATAAGTTGAAAGATATAGCTACAAAATAAGCAGATGTCTCTCTATGTTATGGGTGCAGGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGCACAACTCATACCTGACGGGGAACCAGCTGAGCAGCGGGTGCAGCGAGGTGCCCATCGTGAAGGCCCTCCACGACGGCGTCCGTGTCATCGAGCTCGACCTCTGGCCCAACGCTGCCAAGGACGCCGTCGAGGTCCTCCACGGCAGGTGATCCGCTCGATCAACCACCATCCTACCTTCCTCCAATCTCCATTGCATCCTTAATTTCAATTCACGACAGATTTTTGCTATACGACACTAGTCCCTTTGTCCACAGATTTTGAGCAATTTTACCCATCCTATATTTATACCTCGAGGTACCACATTTTTCACATAAAATTTTAATACCTTGGATATCAACTTTTACACTATAAAGTACCTCGAGGTACCCAAAAATTGGTACCAAATATTGGACGCTAAAATTACTCTAATTTTTTGTTTTAATTTTCCATTTCAATCGTCCTCTCATGTAATTTCATCATCTACTACTCATCCTAACTAGGCGATGGAAATCGTGGTATGAATTTTATCTTAATTTTATTATATTCTAAAACATTAAAATACTCATATTTTTTGGATGAAAGTAGCTGTTAACTATGTTAATTTGTGAAATTTATGTTCAATATAACAGTGCCTATGATTAAAAGTGCATTAAAATTAAAAAAAAGGTTTAGTGGCCATCCTAGCCGTTGCTGATGGGTTGTCCTAAATTAATTAATTAGAAAACCAAATTAACTACTGCAGATTCAACGAATTAAATTAAATTAATGAAATGGAAACCAGACCAAACTATGGACCTATATGGGCCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAGAGATAATTTACAGATATATGTACATGCCTATGTTCTTCTATAGAAACTATATCCCAGTTACTTATTATGCGTATATATATAAGGAATTAATTCACATTCAGGAGCAACTAGGCAAGGCCTTCATCGTCAGATACTGTACATGGATAATCATACAGAGGCTAACCATGGCCATGCAACCTAGGGACCATGGATGAGCTCTCACAGCGCCTCCAAAACCAAAGAAGATAAGGTCCCTAGTCATATGAGAATGGAGAACAGGTCGATGATATTGGAATAAGTGAATTCCCGTCTTTCATTATCAGTCTAAATTTTTTATTCAGAACAAGTTGACGCATGCAACTCAATATAGTATCAGTCCCAAGTTTAAACCCTAGTTGGCATATAATTAAATAAAAAATACAACATATTTCTATCTGAGGTTTGAGGGGACCTCGTGTGAAGGGAAGTGTTGAAATATAAGTGAATTGTCCGTTTTTCTTCATCAGCTTAAACTTTTGGGTTAAACTGTTCGGGATGTATTACACAATAGTGAAAAGAATCTGTGTATACAACTCAATGGTGTGAAGGAGAAATTGGTCGAGTCTATAGAGGGGTCGGTGCGTACAACTCAATCGTGGGAAGTGAAGAGGAGGTCGGTGTGTACAACTCAACAGTGGGAAGTGAAGAGGGAGGTTGGTGTGTACAACTCTATTTTTTTAGATAAAGACAACTCAATTAATAGTGGGAAGTAGGGGGGGGGGGAAGGAGGGGGGGATCGGTGTGTACAATTCAATAGTGTAGAAGGGGAAATTCAGATGAGCATGTTGCTGCCCATGCGCAGAGCTACGAGAAGACTGCTTTTGCGGTTTCGCCTAGGACACATGCCATGTGAAAATATCAAGTCCTTTCGGTGAGCGAAGGACCGAAGTCCTACATAACTTTTTCCCTTGTTTGGTACTCGATAAACCAAAACCTAACCGTAAAAACTGAATATATATTCATGTAAAAAAATAATCCTCGCTATACAAATAAGTTGAAAGATATAGCTACAAAATAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAAATACTCTAATTTTTGTTTTAATTTTCCATTTCAATCGTCCTCTCATGTAATTTCATCATCTACTACTCATCCTAACTAGGCGATGAAAATCGTGGTATGAATTTTATCTTAATTTTATTATATTCTAAAACATTAAAATACTCATATTTTTTGGATGAAAGTAGCTGTTAACTATGTTAATTTGTGAAATTTATGTTCAATATAACAGTGCCTATGATTAAAAGTGCATTAAAATTAAAAAAAAGGTTTAGTGGCCATCCTAGCCGTTGTGTATTTGCTGATGGGTTGTCCTAAATTAATTAATTAGAAAACCAAATTAACTACTGCAGATTCAACGAATTAAATTAAATTAATGAAATGGAAACAAGACCAAACTATGGACCTATATGGGCCAAAATAAATCTACCGGCCCGTCATTAGGAGATAGAGTAGGCCCATGGGCAATGAGGTGGCCCATGGGCCGCGTCCATCACCGGCCTGCTTCACGACGCCGCCGCGCGCGCCGCGACCCGTCGGCTTCAGCTCACCGTTGCCAGCCGTCGCCGGAGAAGAAGCTGACGACGATTTCGCTCCCGCAGGACGCTGACATCGCCAGTGGGTCTGATGAAATGCCTTGAGGCCATCAGGGAGTACGCGTTCGTCGCCTCCCCTTACCCCGTCATCCTCACCCTCGAAGATCACCTCACTCCCGACCTCCAATCCAAAGTCGCCAAGGTGAACACGCATTTGCCATCTCGATCACCTCACCTTCTTCTTCCTCCATATACTGACAATGGCGGCATCGATCGATGGATTTTCACTCGCGCAGATGATCAAGGAGACGTTCGGTGACATGCTCTACGTCTCTGAAACTGAGAACATGGCGGAATTCCCTTCGCCGGACGAGCTCAAGGGGAAGATCATCGTGTCGACGAAGCCGCCCAAGGAGTACCTCCAGACCAAGAACGACGCCGACGCCGACGAGGCCGGCGTCTGGGGCGAGGAGATCACCGACGACAAGGTGGCGGCGACGGCGATGACGACAGAAGAGAAATGCGCGGCGGCGGAGGAAGCAGTCGCCGCCGCCGCCGTCGACGAGGAGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTGATTTCAGCTTTAGTAACATGCCAGGTTTAGTTTGCATGTACAGCTTATTCTGAACTGAACTCTGTGTCTGACAGGGTTAGTGTTCTTGTTCTTGTTCTTGTTCAGGTTTACGCAGAGGAACTTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGTAAGTAGTGCAATTTATGTTATTTCTGTCACACTATTAATAATGGTCTTATTCTGCATGATAAGCACATGAGTCATCATGTTTACTTTTTCAGTTCAGCATTGCAATTGTGTTACATATAGTGGAGTGGTATTCTATTTAACAAATCACAACTTAGTTTGAACTAGTGAACTGGGATATCCTCTTGCAGAGTTGCAGTATAAAAGGATTGTAGCAAGGAAACATTTTTTGTGTCTTTTTCTAAAATCAGGTCTAGCACAAGGAAAGTACTGAATAGTTTTTAAAAAAAAGGCTTTGTGAAGATACATAATAGTTCACCCACATTGATCTGACCTATCTGCTACCATTCATGTTCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTAAACTGGACAAAAGCTAAATTTCCTTTTATTACCGGAAGATCCCAAATGTGCTACTACTATTTTTCATATCTGCTACAGTAACTGAAAGTCTGTAACCATTGTGTCAATGCTACAAAATCTGAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTTAGCATTCTGATCAATCTCATGTACTACTTCCGTTTTTTAATAGATGATGTCATTAACTTTTAGACACATGCTTAACCATTCATCTTATTCAAAAAGTTTCATAATTATAGTTTATTTTGTTGTGAGTTGTTTTTATCACTAGAACTACTTTAAAGCATGATTTATATCTTATGTATTTGCAAAAAAAATTAAATAAGACGAAGATCAAACGTGAGCCCAGAAGTTAACGACGTCTCATCTTTTAAAAAACAAAGAGAGTACTACATATCTAACAAATTAATCGATTACCTAAGATGTACTGAAACTCTGAATGAGCTGTACACAGAGAAGCAAACTCTGAATGTTCAGTTCAGACTTCAGACATGGCAAATGGCTGACAAGAAAAGAAAAACTGAAAACTACTGCAGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGCTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCACCGCGGCGAGCCCCTCCGCTCCGTCAAGCTCCTCATGCGCTTCGACTTCACCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019107