Os11g0689400

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Revision as of 09:20, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os11g0689400| Description = WW/Rsp5/WWP domain containing protein| Version = NM_001075022.2 GI:297612408 GeneID:4351155| Length = 6570 bp| Defi...")
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Gene Name

Os11g0689400

Description

WW/Rsp5/WWP domain containing protein

Version

NM_001075022.2 GI:297612408 GeneID:4351155

Length

6570 bp

Definition

Oryza sativa Japonica Group Os11g0689400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:29841073..29847642

Sequence Coding Region

29841073..29842647,29843013..29843222,29844155..29844223,29844699..29844968,29845339..29845689
,29845792..29846069,29846199..29847642

Expression

GEO Profiles:Os11g0689400

Genome Context

<gbrowseImage1> name=NC_008404:29841073..29847642 source=RiceChromosome11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008404:29841073..29847642 source=RiceChromosome11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagctacagaggccgccacagattcatcgggtccgcgatatgctcctgatgacccaacgctccctgcaccctggaaaggactaatcgatggatcaaccttgtactactggaaccctgatactaatgagactcaatatgagaggccggtggccgctgtgcctcccttgccaacaggtcctcctccagtaaccactacacctatgccaacatccgcatcaggggctttttcacagcctagcatgcagtcgaaccaaggtggtcaagtatcacagtcccagcaggaacgacctggtcagacagtataccctcaagccagccatcttgggcatcagcaactccaacagccaacccagcaatcaccgtttcagccaacggctcagcatcaagctccgtttcagcattcacaacgagcgccctatcaacaacagcagcagcagatgtcgcagcaacctcctgcccatcagtaccccagcacacatccacaacatatgccataccagcatggccattatatgcaaccccagcagcagcagtttcagcagggcccacaatattcatatcaggttggccagcagcaacagatgccgcaagctgcctacaatcaaggtcagcagcagcctatttctcaagctgcctacaaccaaagtcagcagccagcgcaagccgtgggtgcctacaatcaaggtcagcagccgcctgtttctcaagcctcatacaaccaaagtcagcagccaacacaagctgcaggtgcctacaatcaaggccagcagccgtcaatgccccaagcttcctataatcaagttcagccgccacaaatggcacatgctacttacaatcaaggtcagcagccacctggaatgaggatccctcagggtcaggtgcaacctcagcaatcaccgggctttcatcaacccgctcaggtttcacaagtgctgcaaggttcacagtctcaaggacttcaaatgccgccacagcaaggccaactccagcatggcttccatttgacaactcctcagggaaaacaaccacatcatggccatgtaggtcctcaattgagccaagtgccacttgggcagcagagttccactctgaaggttgacgagacaggagttacaggaggtcttgatggaaaacagactggtttttcattaccactcagtcagcagcgtggccagggtcctgtttcaaaacaacagttaccttctaatcatcaactttctggatcacataatcagccaaatattcctggagctggagggccatcatatcctgcaaagcatcatcttggtggatcatccccaggcgaggctaacaacatgaattttttgagctcacctgctcaaatgcatcaaggtggtatggatacaaactatcgacaacatccagctagcagtcctgtcgttccaaatcatattggtccttcaccagttcggcctccaatgggtttcaagatgggcagtagtgaggatcactttgaaagaaatgagctttactcttctggcaggatggatggaacaaataatctccagcagcagccaaagcttgctgcactaccaccactaaaccggccgcaggatatgaggaacgggccgccttatcctcagccagataatttaggggcttttaacatgggacctccacattcagtgccaaatttgcataaccatggtccgtttcctgaagcttcaatgaggcctccgtccagaatgtttgctcccccaaattttccgagcattgcttcagctgacgcatatcgtcaacaccatgaagtcactgcagtgggtgagaatgtgcctcctccatttatgacattcgaggctactggattccctccagagatcttgcaagagatccatgcagctggcttcttaaaccccactccaattcaagctcaaacatggcctgttgcactgcaaaatcgggacatagtagctattgccaagacaggatcagggaagacgctggggtaccttattcctgcttttatacatcttaggcgataccaaaacaacccaatgttgggccctacagtgttagttttggcccctacccgagagcttgcttcacaaatacaagacgaagcagtcaagtttggtcgatcatctagagtctcctgcacttgtctgtatggggggacttcaaagggccttcagctaagagaacttgagcgtggagcagatattgtcgttgcaactcctggacgtcttaatgatatcctggagatgaggaagattagtctccatcaagtttcatttcttgtgcttgatgaggctgaccgtatgcttgatatgggttttgagccacaaatacgtaagattgtggatgagattcctcgaaacagacagactctgatgtatacggccacttggccaaaggaagttacaaaaattgctggggatttactgaaagatcctgttcaggttaatattggtagcattgatgaactcgttgccaacaaatccatcacacagtatgtagaggtggttccaccattggacaagcagcggcgattggagcagatacttagagctcaagaaaggggctctaaggtcatcatattctgctcaaccaagaaaatgtgtgaccagcttgctcgtgacattggtcgtagttttggtgctgcaagtattcatggtgataaatcacaggctgaaagggataatgttctgaatcagtttcgcactggcagagctccaatattagtagccacagatgttgctgctcgtgggcttgacatcaaagatatcagagtagtgatcaattatgactttcccactgggatcgaggactatgttcaccgtatagggcgtacaggaagggctggggcaactggagtctcatatactttcttttctgaacaagattggaaatatgctggtgatttggtgaaagtcttggaaggtgctaatcagcatgtccctccagagttgcaagagatggctgcaagaggtgcagctggagctccaagaaatcaagctggtgggatgagccgttgggatggacctggtggtggtggtaaccgttttgaatctgctgttggtattcctggtagttatggtggaattagggatggcccaggcggctttggtggccgtgatggcccaggcggttttggtggacgggatggcccaggcggctttggtggtcgggatggccctgggggttttattggtcgagaaggtcctggtggctttggcggtcgggagggtcctgttggctttggtggtcaggagagtcctggtggctttggtggacgcaagggacctggtgcctttgaaggtcgagagggtgctgctcctggtagctttggtgggagaggtggtcgtggacctggtggttttggtggcagaggtggaggaagtcctggtggttttggtggccgtggtggcaggggtgattctcatggttttggtggacgtgggaggggtgacttttctggctttggtggacgtggcaggggtgattcttctggctttggtggacgaggccgtggtgatttctctggtggacgtggtgggagagggcgtggatttggagggcgtggacgatctgaccgaggcccacatgaccgttttatctcagatggacgtggaagatacgataaccgccgaggatttggtggcaagggtcgggaccggagctacagccgcagcccagatagaggccgctcgcgaggctatgaccgaagaagtggcagtaggagcctaagtagtaggagcagaagccgaagcaggagctggtcacgtagtaggagccgcagcaggagctggagccggagccgtagccgcagccgcagcccaagtcgcagcaggagcagaagctatgaccagggtgcaggaccggcacgcaggccccggcctagatccggcttcgatgtcctgccacctgcaaccggagccggtcctgcttcaaccggtcctgggcctgtagctgtacctgcacctggatcagcaggtcctgttcccccgcaggtacctgcacaatcactggctgatgcatctgcaatgtcaccaatgtcaccaggtggcctagcacaagaaggtgcaccgttcaacggcgggaacgatggcggcctcgtcccagcacaaggggtactccctttccagggttctgatgtagcaatgccaccaaattttgctgcagctgaagcgtttccaggcccggcagttgagcaggaagcccctgatgtataa</cdnaseq>

Protein Sequence

<aaseq>MAATEAATDSSGPRYAPDDPTLPAPWKGLIDGSTLYYWNPDTNE TQYERPVAAVPPLPTGPPPVTTTPMPTSASGAFSQPSMQSNQGGQVSQSQQERPGQTV YPQASHLGHQQLQQPTQQSPFQPTAQHQAPFQHSQRAPYQQQQQQMSQQPPAHQYPST HPQHMPYQHGHYMQPQQQQFQQGPQYSYQVGQQQQMPQAAYNQGQQQPISQAAYNQSQ QPAQAVGAYNQGQQPPVSQASYNQSQQPTQAAGAYNQGQQPSMPQASYNQVQPPQMAH ATYNQGQQPPGMRIPQGQVQPQQSPGFHQPAQVSQVLQGSQSQGLQMPPQQGQLQHGF HLTTPQGKQPHHGHVGPQLSQVPLGQQSSTLKVDETGVTGGLDGKQTGFSLPLSQQRG QGPVSKQQLPSNHQLSGSHNQPNIPGAGGPSYPAKHHLGGSSPGEANNMNFLSSPAQM HQGGMDTNYRQHPASSPVVPNHIGPSPVRPPMGFKMGSSEDHFERNELYSSGRMDGTN NLQQQPKLAALPPLNRPQDMRNGPPYPQPDNLGAFNMGPPHSVPNLHNHGPFPEASMR PPSRMFAPPNFPSIASADAYRQHHEVTAVGENVPPPFMTFEATGFPPEILQEIHAAGF LNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRYQNNPMLGPTVLVL APTRELASQIQDEAVKFGRSSRVSCTCLYGGTSKGLQLRELERGADIVVATPGRLNDI LEMRKISLHQVSFLVLDEADRMLDMGFEPQIRKIVDEIPRNRQTLMYTATWPKEVTKI AGDLLKDPVQVNIGSIDELVANKSITQYVEVVPPLDKQRRLEQILRAQERGSKVIIFC STKKMCDQLARDIGRSFGAASIHGDKSQAERDNVLNQFRTGRAPILVATDVAARGLDI KDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKYAGDLVKVLEGANQ HVPPELQEMAARGAAGAPRNQAGGMSRWDGPGGGGNRFESAVGIPGSYGGIRDGPGGF GGRDGPGGFGGRDGPGGFGGRDGPGGFIGREGPGGFGGREGPVGFGGQESPGGFGGRK GPGAFEGREGAAPGSFGGRGGRGPGGFGGRGGGSPGGFGGRGGRGDSHGFGGRGRGDF SGFGGRGRGDSSGFGGRGRGDFSGGRGGRGRGFGGRGRSDRGPHDRFISDGRGRYDNR RGFGGKGRDRSYSRSPDRGRSRGYDRRSGSRSLSSRSRSRSRSWSRSRSRSRSWSRSR SRSRSPSRSRSRSYDQGAGPARRPRPRSGFDVLPPATGAGPASTGPGPVAVPAPGSAG PVPPQVPAQSLADASAMSPMSPGGLAQEGAPFNGGNDGGLVPAQGVLPFQGSDVAMPP NFAAAEAFPGPAVEQEAPDV</aaseq>

Gene Sequence

<dnaseqindica>1..1575#1941..2150#3083..3151#3627..3896#4267..4617#4720..4997#5127..6570#atggcagctacagaggccgccacagattcatcgggtccgcgatatgctcctgatgacccaacgctccctgcaccctggaaaggactaatcgatggatcaaccttgtactactggaaccctgatactaatgagactcaatatgagaggccggtggccgctgtgcctcccttgccaacaggtcctcctccagtaaccactacacctatgccaacatccgcatcaggggctttttcacagcctagcatgcagtcgaaccaaggtggtcaagtatcacagtcccagcaggaacgacctggtcagacagtataccctcaagccagccatcttgggcatcagcaactccaacagccaacccagcaatcaccgtttcagccaacggctcagcatcaagctccgtttcagcattcacaacgagcgccctatcaacaacagcagcagcagatgtcgcagcaacctcctgcccatcagtaccccagcacacatccacaacatatgccataccagcatggccattatatgcaaccccagcagcagcagtttcagcagggcccacaatattcatatcaggttggccagcagcaacagatgccgcaagctgcctacaatcaaggtcagcagcagcctatttctcaagctgcctacaaccaaagtcagcagccagcgcaagccgtgggtgcctacaatcaaggtcagcagccgcctgtttctcaagcctcatacaaccaaagtcagcagccaacacaagctgcaggtgcctacaatcaaggccagcagccgtcaatgccccaagcttcctataatcaagttcagccgccacaaatggcacatgctacttacaatcaaggtcagcagccacctggaatgaggatccctcagggtcaggtgcaacctcagcaatcaccgggctttcatcaacccgctcaggtttcacaagtgctgcaaggttcacagtctcaaggacttcaaatgccgccacagcaaggccaactccagcatggcttccatttgacaactcctcagggaaaacaaccacatcatggccatgtaggtcctcaattgagccaagtgccacttgggcagcagagttccactctgaaggttgacgagacaggagttacaggaggtcttgatggaaaacagactggtttttcattaccactcagtcagcagcgtggccagggtcctgtttcaaaacaacagttaccttctaatcatcaactttctggatcacataatcagccaaatattcctggagctggagggccatcatatcctgcaaagcatcatcttggtggatcatccccaggcgaggctaacaacatgaattttttgagctcacctgctcaaatgcatcaaggtggtatggatacaaactatcgacaacatccagctagcagtcctgtcgttccaaatcatattggtccttcaccagttcggcctccaatgggtttcaagatgggcagtagtgaggatcactttgaaagaaatgagctttactcttctggcaggatggatggaacaaataatctccagcagcagccaaagcttgctgcactaccaccactaaaccggccggtaataatttatcatatgacactttgatgtcttaataaagtcaatattgtttgttttgtcacaagtggtgtagccaataatccttctttgttacaaacataggccatatgatactatatagcttaaaagttatgaagttcattcttatggtcttattgaaatgaaatctttttacaccatattttattattggtatctgtgcactagaaaaaggaacataaagagtcctgtaatggtgtagagtttttaccgtgtactactaaaattatagtccttatggcttcaatgcttattatcaatgatctgaaatcttcatagattctgaagctatcaccattaactctactcttcataatattgtacagcaggatatgaggaacgggccgccttatcctcagccagataatttaggggcttttaacatgggacctccacattcagtgccaaatttgcataaccatggtccgtttcctgaagcttcaatgaggcctccgtccagaatgtttgctcccccaaattttccgagcattgcttcagctgacgcatatcgtcaacaccatgaagtcactgcagtggtaatcactaatggtccaatttgcactatattatgtcaaaacaattgaatcacacttcagaacttcaaatatcttgcaacatgatatttctgtttctctttgtatttcttgtcaatagattttagcgttctgttccaagtgtgactaataagctttaaatatccaatgacatgttatcttctaacctttacaagacaaagataatgaaattgttttttgtagcatacccaaatctgagtatctggcatgtcaaatgtggtgtgcggttacatatatgtctgatcaatcctggcaatcacatctcctaatagagaaatgggagggatgcaaatatttctatattcttattagattttctaacatgccctgcataaagacaatagttataaaataccacaactcatgtgtatttgtagatacatctttgatcaatgtaattgaggaaaacgaatggtatagtcatatagctggttttacctgtcaatcttgtttttgataatcgcccttaagtttgtagcttatcttgagcactttttggatagcaactgttacttttctgtcttgtcatatattaggttcctttggtacccttgtgtagtccattatttatataataattcctggaatggctctccgctactctctgaaaaagtaacaagtactagacattgtttgtagtacttccctgtatattgaacccaagagatttgtagttggccataatttggttgatctgctgttcatgtacaattcagaaaaaaaataaagattgtggagcttagaatccattgttgtgttttcatgtgcatgctcaacatttctactattgcatcttcatttttctagttgagttggtatatcaatgttatctgctttatttttcatttactgtaaaaccttttcacatgctatcctgtttctaaaattttcagggtgagaatgtgcctcctccatttatgacattcgaggctactggattccctccagagatcttgcaagaggtatgttttctttggagttgcactgtgccactagtgcatggtaaattgttaatatagaaattcttgtcggcatggaccattagaaagatttcttaggagtgaagattaatttttgaatagcaaagacagcaacttcttatgctgacatataatttaacaactagtgccatcttgtgggcattgtagtggcatacttgtggctgttttctgctgacaagtattggaaagattggtgttctttcagattatataaaatgtggctgaggtttcctgcttctagtctctgccactgtgaatctacaaagagccccttcatgtcttgagttgcttaagtaagcagccataatcacttaggatagcattttcctttttgtcattatagacaacatttatttacttggcactatgcgcataatatgtaaaatggtggagatgcacatatgctaatgattcttacttcattttgtgatttcagatccatgcagctggcttcttaaaccccactccaattcaagctcaaacatggcctgttgcactgcaaaatcgggacatagtagctattgccaagacaggatcagggaagacgctggggtaccttattcctgcttttatacatcttaggcgataccaaaacaacccaatgttgggccctacagtgttagttttggcccctacccgagagcttgcttcacaaatacaagacgaagcagtcaagtttggtcgatcatctagagtctcctgcactgtaagttctgacttgttttttttttttaatatgaattcacatgcttaatctgtcttgatgaaaaaatacgctggaattttggactcttgtttgttctccataagttttgatgttacttacgtttttgacacatgtagtttgagtctgattcttaaaaaaaaaggaagaaaaagaaaatctctggagaagcaaattgttcttgtaatggcatattggcgttgcatgaacgtgcgcaccaaataataattctgctgttatcctatttagtatcttaccttgtagataatgtgcagtatgtcatctgttctgttattagatggcacacctcatttcttgatgcgatgttgattattggtctatatattatcagtgtctgtatggggggacttcaaagggccttcagctaagagaacttgagcgtggagcagatattgtcgttgcaactcctggacgtcttaatgatatcctggagatgaggaagattagtctccatcaagtttcatttcttgtgcttgatgaggctgaccgtatgcttgatatgggttttgagccacaaatacgtaagattgtggatgagattcctcgaaacagacagactctgatgtatacggccacttggccaaaggaagttacaaaaattgctggggatttactgaaagatcctgttcaggttaatattggtagcattgatgaactcgttgccaacaaatccatcacacaggtatttatataatcaaatatagggtccttgttatgccgttttaaatggcctttcttcttttggtaattcagttctaaggttacctcctgtgtgtggatgcagtatgtagaggtggttccaccattggacaagcagcggcgattggagcagatacttagagctcaagaaaggggctctaaggtcatcatattctgctcaaccaagaaaatgtgtgaccagcttgctcgtgacattggtcgtagttttggtgctgcaagtattcatggtgataaatcacaggctgaaagggataatgttctgaatcagtttcgcactggcagagctccaatattagtagccacagatgttgctgctcgtgggcttgacatcaaagatatcaggtgaggctttctcattgtcacaagttaaagtcttctggtgttcgtgttgtctcatcacttacaagtactttacgatattcatattttatcaattgttcaactcactgagacttcacatgtgtttctcagagtagtgatcaattatgactttcccactgggatcgaggactatgttcaccgtatagggcgtacaggaagggctggggcaactggagtctcatatactttcttttctgaacaagattggaaatatgctggtgatttggtgaaagtcttggaaggtgctaatcagcatgtccctccagagttgcaagagatggctgcaagaggtgcagctggagctccaagaaatcaagctggtgggatgagccgttgggatggacctggtggtggtggtaaccgttttgaatctgctgttggtattcctggtagttatggtggaattagggatggcccaggcggctttggtggccgtgatggcccaggcggttttggtggacgggatggcccaggcggctttggtggtcgggatggccctgggggttttattggtcgagaaggtcctggtggctttggcggtcgggagggtcctgttggctttggtggtcaggagagtcctggtggctttggtggacgcaagggacctggtgcctttgaaggtcgagagggtgctgctcctggtagctttggtgggagaggtggtcgtggacctggtggttttggtggcagaggtggaggaagtcctggtggttttggtggccgtggtggcaggggtgattctcatggttttggtggacgtgggaggggtgacttttctggctttggtggacgtggcaggggtgattcttctggctttggtggacgaggccgtggtgatttctctggtggacgtggtgggagagggcgtggatttggagggcgtggacgatctgaccgaggcccacatgaccgttttatctcagatggacgtggaagatacgataaccgccgaggatttggtggcaagggtcgggaccggagctacagccgcagcccagatagaggccgctcgcgaggctatgaccgaagaagtggcagtaggagcctaagtagtaggagcagaagccgaagcaggagctggtcacgtagtaggagccgcagcaggagctggagccggagccgtagccgcagccgcagcccaagtcgcagcaggagcagaagctatgaccagggtgcaggaccggcacgcaggccccggcctagatccggcttcgatgtcctgccacctgcaaccggagccggtcctgcttcaaccggtcctgggcctgtagctgtacctgcacctggatcagcaggtcctgttcccccgcaggtacctgcacaatcactggctgatgcatctgcaatgtcaccaatgtcaccaggtggcctagcacaagaaggtgcaccgttcaacggcgggaacgatggcggcctcgtcccagcacaaggggtactccctttccagggttctgatgtagcaatgccaccaaattttgctgcagctgaagcgtttccaggcccggcagttgagcaggaagcccctgatgtataa</dnaseqindica>

External Link(s)

NCBI Gene:Os11g0689400, RefSeq:Os11g0689400