BGIOSGA019170

From RiceWiki
Revision as of 02:47, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA019170| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA019170, complete gene.| tag = OsI_184...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA019170

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA019170, complete gene.

LocusTag

OsI_18433

Ensembl Transcript ID

BGIOSGA019170-TA

Ensembl Protein ID

BGIOSGA019170-PA

Length

2599

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 5

Location

Chromosome 5:2847842..2850440

Sequence Coding Region

2847842..2847901,2848007..2848306,2848389..2848490,2848587..2848781,2848884..2849171
,2849493..2849679,2849904..2849950,2850348..2850440

Genome Context

<gbrowseImage1> name=IndicaChromosome05:2847842..2850440 source=RiceIndica05 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome05:2847842..2850440 source=RiceIndica05 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAAGCTCGATGGCTCTGCCCGTCTTATGATAGTTTCCGATCTTGACCAGACAATGATTGATCACAATGATCCGAAGAACTTGTCCTTGCTTAGGTTCCAGGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCTCGACTGGAAGATCACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTCCAGACATCACTATCATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATGATGTTGGCTGGGCTGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGACAGCTAAGTTCCCTAAGCTGAAGCCTCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTAGCTTTTTTGTCGACAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAAATCGGCGTGGGCTAGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTACCGCAAGGTGCAGGAAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATGGGAAACCACCAAACAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCAGTGTCCCATCTGTTCATGGTGTCATGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGTATGAAGAAAATGCCAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTGGCATCATGCAAGCTATTGGACACTTCAATTTAGGACCTAACGATTCCCCAAGAGATCTTGAATTCCCTTACCCGAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATGTTCTCTATGAAAAATGGCGGCGGGGTGAGGTTCAAAAGGCCCCATCCATTATCCAGTATTTGAAAAGGATTACTCATCCTAATGGAACAACTATTCATCCTTCTGGAAGGGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAAACAAGGCAAGAAGTTCCAATTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTACAATTAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGCAATGTTCGGTATTGCTGCCTCACAACTCTTCTGCTGACTATGAAGCCTGAGACTGAAGATGGCTTCGAGATTACACACATCCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAG</cdnaseq>

Protein Sequence

<aaseq>MDKLDGSARLMIVSDLDQTMIDHNDPKNLSLLRFQALWESEFSQDSLLVFSTGRSPISYRGLRTQKPLITPDITIMSVGTVIAYGEEMIHDVGWAEFLSNKWDRDIVVEETAKFPKLKPQPERSQGPHKVSFFVDKEGAREVMDSLPETLNRRGLDVKIIFSSGEALDVLPQGAGKGQALLYLLKKFNSDGKPPNSTLVCGDSGNDAELFSVPSVHGVMVSNAQEELLQWYEENARGNPMMIHATERCAAGIMQAIGHFNLGPNDSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWRRGEVQKAPSIIQYLKRITHPNGTTIHPSGRECSLHASIDALSSCYADKQGKKFQLWVDRIVASSIGTINWLVRFDKWEMEGNVRYCCLTTLLLTMKPETEDGFEITHIHKTWLEGYSAGNEHACIL</aaseq>

Gene Sequence

<dnaseqindica>1..60#166..465#548..649#746..940#1043..1330#1652..1838#2063..2109#2507..2599#ATGGATAAGCTCGATGGCTCTGCCCGTCTTATGATAGTTTCCGATCTTGACCAGACAATGGTGCGTAGTTAAACTCATCCCTTATCTATCTAGACTCAAGAACTACCCATACTGTTATGTTCTGTAGCTACAAAATGATTGATCTTTTTTATTTTTTGTTTGCAGATTGATCACAATGATCCGAAGAACTTGTCCTTGCTTAGGTTCCAGGCGCTATGGGAGTCCGAGTTCTCCCAAGATTCTCTACTGGTCTTCTCGACTGGAAGATCACCTATCAGTTACAGGGGTTTGAGAACACAGAAGCCTTTGATCACTCCAGACATCACTATCATGTCTGTGGGCACTGTGATAGCATATGGTGAAGAGATGATTCATGATGTTGGCTGGGCTGAATTCCTTAGCAACAAATGGGATAGGGATATCGTTGTCGAGGAGACAGCTAAGTTCCCTAAGCTGAAGCCTCAGGCATGTTCAATGAATTGTTTGATTACAAATCCTAAGTAGGTTTTCCATTTCAATGAGTGCACTAAAAATTGTGTCGATGCAGCCAGAGAGGAGTCAGGGTCCTCATAAGGTTAGCTTTTTTGTCGACAAGGAGGGTGCTCGGGAAGTTATGGATTCTCTCCCTGAGACGTTAAATCGGCGTGGGGTAAGTCTGCGAAAGTGTGGGTGACTTACTTTTATTATGAGTGACATTGCTTAATGTTGTTTTAATTTTACCATGCTCCTTCTTTTCTATGATCAGCTAGATGTTAAAATAATCTTCAGTAGTGGTGAGGCCCTTGATGTATTACCGCAAGGTGCAGGAAAAGGCCAGGCTCTTCTATATTTGCTGAAAAAGTTCAATTCAGATGGGAAACCACCAAACAGTACTCTTGTTTGTGGTGACTCTGGCAATGATGCAGAATTATTCAGTGTCCCATCTGTTCATGGTGTCATGGTCAGTGAGTCACTGCACAAGGAATCACATGAAACTGTCCACTAAACTGATGGCAGTGGTTTTCGTTGTAAGCTTATTACAGGGTTTTGAAATCATGTTCAGGTCAGCAATGCCCAAGAGGAGCTGCTTCAGTGGTATGAAGAAAATGCCAGGGGCAATCCTATGATGATTCATGCAACCGAGAGGTGTGCTGCTGGCATCATGCAAGCTATTGGACACTTCAATTTAGGACCTAACGATTCCCCAAGAGATCTTGAATTCCCTTACCCGAAGTTAGACGCCATCAAACCTGCAGATGTTGTGGTGAAGTTTTATGTTCTCTATGAAAAATGGCGGCGGGGTGAGGTTCAAAAGGCCCCATCCATTATCCAGTATTTGAAAAGGATTACTGTAAGTACATTCCTCAGCTACATTCTTAGAATAACTCAGTCTAGCTTTGTTCATAAACCCCTCCTTTTGAAATCAATCATACCTTTTGTCGACTGCTATAGTTAGGTTATGAAAAGAGGTAACTATATAATTTGTGTCAGCATGTTATGTATAATTTTGCAAAAGTAATTTCAGACCATATGATACCACTTGTCTCTTGTCTGGCGAAATGTACATATTTCTGATTCTTTTTTTTTTTTTGGCGAGGATATTACTGGTTCATATTAGTTTCCTTGAGCTACATTTAAACCGATCTTCTTCTTCTTCTTTTATGTGTGTTAGCATCCTAATGGAACAACTATTCATCCTTCTGGAAGGGAGTGTTCACTTCATGCATCCATTGATGCACTGAGTTCATGTTATGCTGATAAACAAGGCAAGAAGTTCCAATTATGGGTGGATAGAATTGTCGCTTCATCAATCGGTACAATTAATTGGCTGGTGAGGTTTGACAAGTGGGAAATGGAAGGTATATCCTCAGATTATTTGCACAATAGATTAGTCACAGTAGTTATTCCATCCCTGTAGTTTTTCTATTCCTTTTTTGTTCAAAATTCTAAATGGTTTCTTGGCATAATTTTCCATTCTATTGCTCCATGATTATTTTATTCTTCTTATTTCCTATGTCCACTTGTCCATTTTATTCTTTTTCATTGGCTTGCACGTCAATGTTAATGGTCCTGCTAATCTCAGGCAATGTTCGGTATTGCTGCCTCACAACTCTTCTGCTGACTATGAAGGTACACCCTCACAGGCTCACAGCTTTGTACATATACTAGCTGAATGTCCATGCTTTGCTGCGGATAAAAGAAAATACATCATAATACTGCCTAAAATAAAATTTTCATGAAATGTGTTATCCATTTTGTTTTCTAAAGAGAAGATTTACCTTAATTTGATTTTATATGTGGATATCCATTTAGATTTGATTGTTTCTTGTATTAAGAAGTTTAAGGGGTATTTGCAAATTTTACAATGGGAGTAGATGGGGTGGCAGATTCACTGCCACCACCACTAGCTCATTTTAAAGGAATATAGATTTCTATATCCTTCATGTTTACAGACTTTCTTGTGTACATCTATGTTCATATAAAATCTATATGTATCCTTAAATAAGGTTATCTGCTTAACTCGCAGCCTGAGACTGAAGATGGCTTCGAGATTACACACATCCACAAGACCTGGCTTGAAGGATACTCTGCAGGAAATGAGCATGCATGCATCCTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA019170

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA019170&oldid=47926"